EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000016410 (Gene tree)
Gene ID: -
Gene Symbol: ddx54
Alias: -
Full Name: DEAD-box helicase 54
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 19262 bases
Position: chrGL172727.1:199945-219206
Accession: XB-GENE-1011576
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000035818	DBP10CT	PF08147.12	9.5e-18	1	1
ENSXETP00000035818	ResIII	PF04851.15	1.5e-07	1	1
ENSXETP00000035818	DEAD	PF00270.29	2.1e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000035818	-	2613	-	ENSXETP00000035818	849 (aa)	-	F7CX84

Gene Model

Click here to download ENSXETG00000016410's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000016410's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000016410	ddx54	96	65.212	ENSG00000123064	DDX54	100	90.385	Homo_sapiens
ENSXETG00000016410	ddx54	98	63.785	ENSAPOG00000008602	ddx54	99	64.245	Acanthochromis_polyacanthus
ENSXETG00000016410	ddx54	96	65.572	ENSAMEG00000008775	DDX54	93	65.043	Ailuropoda_melanoleuca
ENSXETG00000016410	ddx54	96	65.296	ENSACIG00000019104	ddx54	99	62.801	Amphilophus_citrinellus
ENSXETG00000016410	ddx54	98	64.429	ENSAOCG00000008449	ddx54	99	64.319	Amphiprion_ocellaris
ENSXETG00000016410	ddx54	98	64.429	ENSAPEG00000014287	ddx54	99	64.319	Amphiprion_percula
ENSXETG00000016410	ddx54	100	62.989	ENSATEG00000018529	ddx54	99	62.687	Anabas_testudineus
ENSXETG00000016410	ddx54	95	67.730	ENSAPLG00000013191	DDX54	99	67.730	Anas_platyrhynchos
ENSXETG00000016410	ddx54	96	67.473	ENSACAG00000004703	DDX54	97	66.868	Anolis_carolinensis
ENSXETG00000016410	ddx54	91	59.411	ENSANAG00000032241	-	94	57.977	Aotus_nancymaae
ENSXETG00000016410	ddx54	99	54.462	ENSANAG00000032761	-	97	54.483	Aotus_nancymaae
ENSXETG00000016410	ddx54	100	65.777	ENSACLG00000013176	ddx54	99	65.389	Astatotilapia_calliptera
ENSXETG00000016410	ddx54	100	63.647	ENSAMXG00000009189	ddx54	99	63.605	Astyanax_mexicanus
ENSXETG00000016410	ddx54	98	64.151	ENSBTAG00000011930	DDX54	93	63.963	Bos_taurus
ENSXETG00000016410	ddx54	91	45.671	WBGene00022378	Y94H6A.5	98	45.443	Caenorhabditis_elegans
ENSXETG00000016410	ddx54	84	69.793	ENSCJAG00000010039	DDX54	82	67.366	Callithrix_jacchus
ENSXETG00000016410	ddx54	66	55.497	ENSCAFG00000009029	DDX54	99	56.021	Canis_familiaris
ENSXETG00000016410	ddx54	96	65.488	ENSCAFG00020017643	DDX54	98	63.931	Canis_lupus_dingo
ENSXETG00000016410	ddx54	96	64.156	ENSCHIG00000026798	DDX54	98	62.587	Capra_hircus
ENSXETG00000016410	ddx54	97	60.952	ENSTSYG00000007898	DDX54	95	60.429	Carlito_syrichta
ENSXETG00000016410	ddx54	96	63.415	ENSCAPG00000001482	DDX54	95	62.077	Cavia_aperea
ENSXETG00000016410	ddx54	98	62.646	ENSCPOG00000020649	DDX54	98	61.276	Cavia_porcellus
ENSXETG00000016410	ddx54	96	66.098	ENSCCAG00000022625	DDX54	98	64.360	Cebus_capucinus
ENSXETG00000016410	ddx54	96	64.806	ENSCATG00000041943	DDX54	98	63.333	Cercocebus_atys
ENSXETG00000016410	ddx54	98	63.345	ENSCLAG00000010748	DDX54	98	63.054	Chinchilla_lanigera
ENSXETG00000016410	ddx54	99	62.777	ENSCSAG00000002432	DDX54	93	62.894	Chlorocebus_sabaeus
ENSXETG00000016410	ddx54	77	66.107	ENSCPBG00000017982	DDX54	85	66.107	Chrysemys_picta_bellii
ENSXETG00000016410	ddx54	88	54.334	ENSCING00000004789	-	93	53.866	Ciona_intestinalis
ENSXETG00000016410	ddx54	89	52.659	ENSCSAVG00000008916	-	97	67.879	Ciona_savignyi
ENSXETG00000016410	ddx54	90	87.983	ENSCANG00000020637	DDX54	99	87.983	Colobus_angolensis_palliatus
ENSXETG00000016410	ddx54	100	62.716	ENSCGRG00001014803	Ddx54	98	62.775	Cricetulus_griseus_chok1gshd
ENSXETG00000016410	ddx54	100	62.457	ENSCGRG00000002827	Ddx54	98	62.514	Cricetulus_griseus_crigri
ENSXETG00000016410	ddx54	98	61.882	ENSCSEG00000016462	ddx54	99	61.822	Cynoglossus_semilaevis
ENSXETG00000016410	ddx54	99	64.219	ENSCVAG00000022404	ddx54	99	63.793	Cyprinodon_variegatus
ENSXETG00000016410	ddx54	98	63.593	ENSDARG00000105286	ddx54	99	62.903	Danio_rerio
ENSXETG00000016410	ddx54	96	64.988	ENSDNOG00000032913	DDX54	98	63.097	Dasypus_novemcinctus
ENSXETG00000016410	ddx54	82	59.169	ENSDORG00000003399	Ddx54	95	59.169	Dipodomys_ordii
ENSXETG00000016410	ddx54	95	42.571	FBgn0052344	CG32344	87	45.148	Drosophila_melanogaster
ENSXETG00000016410	ddx54	51	90.210	ENSETEG00000008430	-	52	90.210	Echinops_telfairi
ENSXETG00000016410	ddx54	76	62.730	ENSEBUG00000008886	ddx54	99	59.972	Eptatretus_burgeri
ENSXETG00000016410	ddx54	89	62.484	ENSEASG00005009501	DDX54	99	57.320	Equus_asinus_asinus
ENSXETG00000016410	ddx54	88	76.789	ENSECAG00000012890	DDX54	98	73.132	Equus_caballus
ENSXETG00000016410	ddx54	63	88.608	ENSEEUG00000008296	-	68	88.608	Erinaceus_europaeus
ENSXETG00000016410	ddx54	100	62.174	ENSELUG00000013533	ddx54	99	62.401	Esox_lucius
ENSXETG00000016410	ddx54	96	64.713	ENSFCAG00000027806	DDX54	98	62.384	Felis_catus
ENSXETG00000016410	ddx54	93	68.844	ENSFALG00000007737	DDX54	99	68.342	Ficedula_albicollis
ENSXETG00000016410	ddx54	85	80.741	ENSFDAG00000019953	DDX54	97	76.000	Fukomys_damarensis
ENSXETG00000016410	ddx54	100	63.751	ENSFHEG00000018425	ddx54	99	63.061	Fundulus_heteroclitus
ENSXETG00000016410	ddx54	96	62.019	ENSGMOG00000011746	ddx54	100	62.185	Gadus_morhua
ENSXETG00000016410	ddx54	95	68.911	ENSGALG00000007490	DDX54	96	68.299	Gallus_gallus
ENSXETG00000016410	ddx54	100	63.066	ENSGAFG00000010336	ddx54	99	63.066	Gambusia_affinis
ENSXETG00000016410	ddx54	100	60.113	ENSGACG00000016793	ddx54	99	60.113	Gasterosteus_aculeatus
ENSXETG00000016410	ddx54	96	70.920	ENSGAGG00000022803	DDX54	99	70.677	Gopherus_agassizii
ENSXETG00000016410	ddx54	96	65.091	ENSGGOG00000010414	DDX54	98	63.018	Gorilla_gorilla
ENSXETG00000016410	ddx54	96	64.842	ENSHGLG00000014411	DDX54	98	62.963	Heterocephalus_glaber_female
ENSXETG00000016410	ddx54	96	65.164	ENSHGLG00100018511	DDX54	98	63.268	Heterocephalus_glaber_male
ENSXETG00000016410	ddx54	98	62.911	ENSHCOG00000019287	ddx54	99	62.014	Hippocampus_comes
ENSXETG00000016410	ddx54	100	63.230	ENSIPUG00000015556	Ddx54	99	63.014	Ictalurus_punctatus
ENSXETG00000016410	ddx54	90	63.299	ENSSTOG00000004068	DDX54	99	63.449	Ictidomys_tridecemlineatus
ENSXETG00000016410	ddx54	96	64.548	ENSJJAG00000015712	Ddx54	97	62.631	Jaculus_jaculus
ENSXETG00000016410	ddx54	100	64.103	ENSKMAG00000017520	ddx54	99	64.219	Kryptolebias_marmoratus
ENSXETG00000016410	ddx54	100	61.680	ENSLBEG00000019480	ddx54	99	61.680	Labrus_bergylta
ENSXETG00000016410	ddx54	94	71.023	ENSLACG00000008944	DDX54	98	68.023	Latimeria_chalumnae
ENSXETG00000016410	ddx54	100	66.435	ENSLOCG00000008485	ddx54	99	66.318	Lepisosteus_oculatus
ENSXETG00000016410	ddx54	91	57.090	ENSLAFG00000027782	DDX54	99	56.667	Loxodonta_africana
ENSXETG00000016410	ddx54	96	64.970	ENSMFAG00000043636	DDX54	98	63.375	Macaca_fascicularis
ENSXETG00000016410	ddx54	96	64.485	ENSMMUG00000021795	DDX54	98	63.031	Macaca_mulatta
ENSXETG00000016410	ddx54	96	58.788	ENSMNEG00000043605	DDX54	98	57.750	Macaca_nemestrina
ENSXETG00000016410	ddx54	96	61.772	ENSMLEG00000038981	DDX54	98	60.460	Mandrillus_leucophaeus
ENSXETG00000016410	ddx54	100	62.600	ENSMAMG00000012784	ddx54	99	62.700	Mastacembelus_armatus
ENSXETG00000016410	ddx54	100	64.186	ENSMZEG00005018773	ddx54	99	64.070	Maylandia_zebra
ENSXETG00000016410	ddx54	95	67.389	ENSMGAG00000009183	DDX54	99	67.148	Meleagris_gallopavo
ENSXETG00000016410	ddx54	95	64.294	ENSMAUG00000011051	Ddx54	98	62.356	Mesocricetus_auratus
ENSXETG00000016410	ddx54	100	63.023	ENSMICG00000012217	DDX54	98	63.140	Microcebus_murinus
ENSXETG00000016410	ddx54	100	63.721	ENSMOCG00000010835	Ddx54	98	62.140	Microtus_ochrogaster
ENSXETG00000016410	ddx54	98	61.466	ENSMMOG00000009634	ddx54	99	60.648	Mola_mola
ENSXETG00000016410	ddx54	95	66.545	ENSMODG00000003413	DDX54	97	67.365	Monodelphis_domestica
ENSXETG00000016410	ddx54	100	64.111	ENSMALG00000022098	ddx54	99	64.111	Monopterus_albus
ENSXETG00000016410	ddx54	98	62.967	MGP_CAROLIEiJ_G0027665	Ddx54	98	63.341	Mus_caroli
ENSXETG00000016410	ddx54	98	63.443	ENSMUSG00000029599	Ddx54	98	63.079	Mus_musculus
ENSXETG00000016410	ddx54	96	64.174	MGP_PahariEiJ_G0024247	Ddx54	97	63.372	Mus_pahari
ENSXETG00000016410	ddx54	98	62.674	MGP_SPRETEiJ_G0028665	Ddx54	97	63.457	Mus_spretus
ENSXETG00000016410	ddx54	96	64.390	ENSMPUG00000002574	DDX54	98	62.716	Mustela_putorius_furo
ENSXETG00000016410	ddx54	95	65.239	ENSNGAG00000021313	Ddx54	97	62.616	Nannospalax_galili
ENSXETG00000016410	ddx54	70	78.272	ENSNBRG00000005588	ddx54	77	78.272	Neolamprologus_brichardi
ENSXETG00000016410	ddx54	96	65.366	ENSNLEG00000000162	DDX54	98	63.584	Nomascus_leucogenys
ENSXETG00000016410	ddx54	81	70.130	ENSMEUG00000015392	DDX54	96	71.108	Notamacropus_eugenii
ENSXETG00000016410	ddx54	88	57.692	ENSOPRG00000012000	DDX54	85	57.958	Ochotona_princeps
ENSXETG00000016410	ddx54	98	62.012	ENSODEG00000014863	DDX54	98	61.628	Octodon_degus
ENSXETG00000016410	ddx54	96	63.394	ENSOCUG00000008932	DDX54	98	61.406	Oryctolagus_cuniculus
ENSXETG00000016410	ddx54	100	63.931	ENSORLG00000007385	ddx54	99	63.931	Oryzias_latipes
ENSXETG00000016410	ddx54	100	64.195	ENSORLG00020000858	ddx54	99	64.195	Oryzias_latipes_hni
ENSXETG00000016410	ddx54	100	63.815	ENSORLG00015006956	ddx54	99	63.815	Oryzias_latipes_hsok
ENSXETG00000016410	ddx54	94	66.380	ENSOMEG00000003663	ddx54	99	64.849	Oryzias_melastigma
ENSXETG00000016410	ddx54	96	64.749	ENSOGAG00000004210	DDX54	98	63.006	Otolemur_garnettii
ENSXETG00000016410	ddx54	96	65.530	ENSOARG00000008363	DDX54	98	63.006	Ovis_aries
ENSXETG00000016410	ddx54	96	63.766	ENSPPAG00000042178	DDX54	98	63.261	Pan_paniscus
ENSXETG00000016410	ddx54	96	62.759	ENSPPRG00000005223	DDX54	98	61.040	Panthera_pardus
ENSXETG00000016410	ddx54	78	64.354	ENSPTIG00000019728	DDX54	88	64.354	Panthera_tigris_altaica
ENSXETG00000016410	ddx54	96	64.234	ENSPTRG00000005483	DDX54	98	63.249	Pan_troglodytes
ENSXETG00000016410	ddx54	96	64.364	ENSPANG00000008883	DDX54	98	62.916	Papio_anubis
ENSXETG00000016410	ddx54	100	64.747	ENSPKIG00000018272	ddx54	98	64.591	Paramormyrops_kingsleyae
ENSXETG00000016410	ddx54	55	79.828	ENSPSIG00000005055	DDX54	96	79.193	Pelodiscus_sinensis
ENSXETG00000016410	ddx54	96	63.436	ENSPMGG00000010988	ddx54	99	62.805	Periophthalmus_magnuspinnatus
ENSXETG00000016410	ddx54	100	62.775	ENSPEMG00000016701	Ddx54	98	62.775	Peromyscus_maniculatus_bairdii
ENSXETG00000016410	ddx54	100	63.825	ENSPFOG00000019822	ddx54	99	63.940	Poecilia_formosa
ENSXETG00000016410	ddx54	100	63.825	ENSPLAG00000004530	ddx54	99	63.940	Poecilia_latipinna
ENSXETG00000016410	ddx54	100	63.594	ENSPMEG00000010803	ddx54	99	63.710	Poecilia_mexicana
ENSXETG00000016410	ddx54	100	64.120	ENSPREG00000014372	ddx54	99	64.120	Poecilia_reticulata
ENSXETG00000016410	ddx54	96	65.212	ENSPPYG00000004984	DDX54	98	63.563	Pongo_abelii
ENSXETG00000016410	ddx54	96	61.427	ENSPCAG00000008462	DDX54	98	60.116	Procavia_capensis
ENSXETG00000016410	ddx54	96	64.146	ENSPCOG00000006050	DDX54	98	62.602	Propithecus_coquereli
ENSXETG00000016410	ddx54	88	90.308	ENSPVAG00000017347	DDX54	91	78.853	Pteropus_vampyrus
ENSXETG00000016410	ddx54	100	61.468	ENSPNAG00000014459	ddx54	96	68.676	Pygocentrus_nattereri
ENSXETG00000016410	ddx54	96	65.488	ENSRNOG00000001377	Ddx54	94	63.225	Rattus_norvegicus
ENSXETG00000016410	ddx54	100	62.687	ENSRBIG00000032535	DDX54	98	63.031	Rhinopithecus_bieti
ENSXETG00000016410	ddx54	100	59.748	ENSRROG00000029557	DDX54	98	59.633	Rhinopithecus_roxellana
ENSXETG00000016410	ddx54	81	38.015	YDL031W	-	77	38.015	Saccharomyces_cerevisiae
ENSXETG00000016410	ddx54	96	66.302	ENSSBOG00000028194	DDX54	98	64.171	Saimiri_boliviensis_boliviensis
ENSXETG00000016410	ddx54	87	77.960	ENSSHAG00000015646	DDX54	99	65.809	Sarcophilus_harrisii
ENSXETG00000016410	ddx54	98	65.914	ENSSFOG00015014981	ddx54	99	64.965	Scleropages_formosus
ENSXETG00000016410	ddx54	98	61.977	ENSSMAG00000003210	ddx54	99	61.460	Scophthalmus_maximus
ENSXETG00000016410	ddx54	96	62.768	ENSSDUG00000004474	ddx54	99	61.574	Seriola_dumerili
ENSXETG00000016410	ddx54	98	61.761	ENSSLDG00000010380	ddx54	99	62.187	Seriola_lalandi_dorsalis
ENSXETG00000016410	ddx54	95	71.429	ENSSPUG00000014141	DDX54	93	70.936	Sphenodon_punctatus
ENSXETG00000016410	ddx54	93	64.025	ENSSPAG00000022918	ddx54	97	63.581	Stegastes_partitus
ENSXETG00000016410	ddx54	96	65.815	ENSSSCG00000009876	DDX54	98	63.279	Sus_scrofa
ENSXETG00000016410	ddx54	94	67.036	ENSTGUG00000009126	DDX54	99	66.913	Taeniopygia_guttata
ENSXETG00000016410	ddx54	96	64.466	ENSTRUG00000014939	ddx54	99	62.227	Takifugu_rubripes
ENSXETG00000016410	ddx54	98	62.750	ENSTNIG00000009037	ddx54	100	62.543	Tetraodon_nigroviridis
ENSXETG00000016410	ddx54	73	82.963	ENSTBEG00000003783	DDX54	76	82.963	Tupaia_belangeri
ENSXETG00000016410	ddx54	96	62.182	ENSTTRG00000016678	DDX54	98	60.759	Tursiops_truncatus
ENSXETG00000016410	ddx54	96	65.079	ENSUAMG00000028387	DDX54	99	63.941	Ursus_americanus
ENSXETG00000016410	ddx54	81	81.841	ENSUMAG00000010245	DDX54	94	83.029	Ursus_maritimus
ENSXETG00000016410	ddx54	96	65.610	ENSVVUG00000010212	DDX54	98	64.046	Vulpes_vulpes
ENSXETG00000016410	ddx54	100	63.753	ENSXCOG00000002909	ddx54	99	63.869	Xiphophorus_couchianus
ENSXETG00000016410	ddx54	100	64.692	ENSXMAG00000005312	ddx54	99	64.692	Xiphophorus_maculatus