EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000016499 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: nucleoplasmin ATPase-like
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 4826 bases
Position: chrGL172670.1:214720-219545
Accession: XB-GENE-5867547
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000061409	Nucleoplasmin	PF03066.15	3.3e-29	1	1
ENSXETP00000035983	Nucleoplasmin	PF03066.15	7.7e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000035983	-	384	-	ENSXETP00000035983	127 (aa)	-	F7DW01
ENSXETT00000061238	-	456	-	ENSXETP00000061409	152 (aa)	-	F7B505

Gene Model

Click here to download ENSXETG00000016499's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000016499's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000016499	-	81	48.113	ENSXETG00000010542	npm2	60	47.706
ENSXETG00000016499	-	82	47.222	ENSXETG00000014472	npm3	69	45.763

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000016499	-	73	43.878	ENSG00000158806	NPM2	84	39.759	Homo_sapiens
ENSXETG00000016499	-	75	46.000	ENSAMEG00000003542	-	61	39.098	Ailuropoda_melanoleuca
ENSXETG00000016499	-	63	34.653	ENSAMEG00000001239	-	53	34.906	Ailuropoda_melanoleuca
ENSXETG00000016499	-	87	44.737	ENSACAG00000000163	-	62	43.902	Anolis_carolinensis
ENSXETG00000016499	-	73	43.000	ENSANAG00000038138	-	74	43.689	Aotus_nancymaae
ENSXETG00000016499	-	79	37.864	ENSAMXG00000038475	npm2b	56	38.318	Astyanax_mexicanus
ENSXETG00000016499	-	87	45.946	ENSAMXG00000001084	npm2a	86	44.800	Astyanax_mexicanus
ENSXETG00000016499	-	76	46.535	ENSBTAG00000046918	NPM2	52	46.535	Bos_taurus
ENSXETG00000016499	-	73	44.000	ENSCJAG00000020389	NPM2	74	44.660	Callithrix_jacchus
ENSXETG00000016499	-	80	44.340	ENSCAFG00020015227	-	64	40.741	Canis_lupus_dingo
ENSXETG00000016499	-	89	41.525	ENSCAFG00020015194	-	64	39.695	Canis_lupus_dingo
ENSXETG00000016499	-	87	42.342	ENSCAFG00020015318	-	63	41.221	Canis_lupus_dingo
ENSXETG00000016499	-	83	43.243	ENSCAFG00020007666	-	61	40.602	Canis_lupus_dingo
ENSXETG00000016499	-	76	45.545	ENSCHIG00000026056	NPM2	51	45.545	Capra_hircus
ENSXETG00000016499	-	85	39.855	ENSTSYG00000026275	NPM2	99	39.855	Carlito_syrichta
ENSXETG00000016499	-	73	40.860	ENSCAPG00000006057	NPM2	71	34.615	Cavia_aperea
ENSXETG00000016499	-	73	40.860	ENSCPOG00000039799	NPM2	71	34.615	Cavia_porcellus
ENSXETG00000016499	-	73	46.000	ENSCCAG00000035076	NPM2	74	46.602	Cebus_capucinus
ENSXETG00000016499	-	73	42.857	ENSCATG00000031833	NPM2	74	43.564	Cercocebus_atys
ENSXETG00000016499	-	71	39.286	ENSCLAG00000013600	NPM2	57	39.286	Chinchilla_lanigera
ENSXETG00000016499	-	73	41.837	ENSCSAG00000016588	NPM2	53	42.574	Chlorocebus_sabaeus
ENSXETG00000016499	-	73	42.857	ENSCANG00000040109	NPM2	74	43.564	Colobus_angolensis_palliatus
ENSXETG00000016499	-	77	41.176	ENSDARG00000053963	npm2b	60	40.179	Danio_rerio
ENSXETG00000016499	-	81	45.631	ENSDARG00000076391	npm2a	74	42.735	Danio_rerio
ENSXETG00000016499	-	82	44.037	ENSEASG00005018856	NPM2	56	44.037	Equus_asinus_asinus
ENSXETG00000016499	-	82	44.037	ENSECAG00000024685	NPM2	50	44.037	Equus_caballus
ENSXETG00000016499	-	79	42.718	ENSELUG00000004822	npm2b	68	40.678	Esox_lucius
ENSXETG00000016499	-	82	44.340	ENSELUG00000017306	-	89	43.220	Esox_lucius
ENSXETG00000016499	-	73	42.857	ENSFDAG00000007971	NPM2	62	41.026	Fukomys_damarensis
ENSXETG00000016499	-	86	54.955	ENSGALG00000054664	-	81	51.200	Gallus_gallus
ENSXETG00000016499	-	77	48.485	ENSGALG00000050870	NPM2	63	42.742	Gallus_gallus
ENSXETG00000016499	-	71	48.936	ENSGAGG00000005236	NPM2	60	43.103	Gopherus_agassizii
ENSXETG00000016499	-	73	43.878	ENSGGOG00000007071	NPM2	74	44.554	Gorilla_gorilla
ENSXETG00000016499	-	84	49.533	ENSIPUG00000010101	npm2a	77	48.739	Ictalurus_punctatus
ENSXETG00000016499	-	82	39.252	ENSIPUG00000013175	npm2b	70	38.017	Ictalurus_punctatus
ENSXETG00000016499	-	76	46.602	ENSSTOG00000013623	NPM2	52	45.614	Ictidomys_tridecemlineatus
ENSXETG00000016499	-	80	48.148	ENSLACG00000016196	NPM2	71	45.161	Latimeria_chalumnae
ENSXETG00000016499	-	79	42.718	ENSLOCG00000014878	npm2b	64	41.600	Lepisosteus_oculatus
ENSXETG00000016499	-	76	41.584	ENSLAFG00000015584	NPM2	53	40.517	Loxodonta_africana
ENSXETG00000016499	-	73	42.857	ENSMFAG00000032098	NPM2	74	43.564	Macaca_fascicularis
ENSXETG00000016499	-	73	42.857	ENSMMUG00000002034	NPM2	74	43.564	Macaca_mulatta
ENSXETG00000016499	-	73	42.857	ENSMNEG00000010994	NPM2	74	43.564	Macaca_nemestrina
ENSXETG00000016499	-	73	42.857	ENSMLEG00000030071	NPM2	74	43.564	Mandrillus_leucophaeus
ENSXETG00000016499	-	78	42.718	ENSMAUG00000004228	Npm2	59	40.157	Mesocricetus_auratus
ENSXETG00000016499	-	73	43.878	ENSMICG00000030722	-	74	44.554	Microcebus_murinus
ENSXETG00000016499	-	76	41.000	ENSMOCG00000017251	Npm2	64	37.190	Microtus_ochrogaster
ENSXETG00000016499	-	76	46.535	ENSMODG00000009677	-	56	45.946	Monodelphis_domestica
ENSXETG00000016499	-	58	42.500	ENSMODG00000004175	-	52	38.710	Monodelphis_domestica
ENSXETG00000016499	-	77	42.424	ENSMUSG00000047911	Npm2	70	38.983	Mus_musculus
ENSXETG00000016499	-	77	42.424	MGP_PahariEiJ_G0030509	Npm2	59	39.024	Mus_pahari
ENSXETG00000016499	-	77	42.424	MGP_SPRETEiJ_G0020384	Npm2	57	38.983	Mus_spretus
ENSXETG00000016499	-	76	45.545	ENSMPUG00000004012	NPM2	57	42.857	Mustela_putorius_furo
ENSXETG00000016499	-	82	43.119	ENSMLUG00000016075	NPM2	52	43.119	Myotis_lucifugus
ENSXETG00000016499	-	76	45.192	ENSNGAG00000022056	Npm2	58	40.800	Nannospalax_galili
ENSXETG00000016499	-	73	42.857	ENSNLEG00000035765	NPM2	74	43.564	Nomascus_leucogenys
ENSXETG00000016499	-	77	39.623	ENSOPRG00000012940	NPM2	61	35.878	Ochotona_princeps
ENSXETG00000016499	-	73	40.816	ENSODEG00000006433	NPM2	57	37.398	Octodon_degus
ENSXETG00000016499	-	80	45.794	ENSOANG00000020262	-	54	44.628	Ornithorhynchus_anatinus
ENSXETG00000016499	-	73	45.918	ENSOGAG00000011562	NPM2	58	40.476	Otolemur_garnettii
ENSXETG00000016499	-	73	43.878	ENSPPAG00000040749	NPM2	74	44.554	Pan_paniscus
ENSXETG00000016499	-	76	45.545	ENSPPRG00000022157	NPM2	86	44.444	Panthera_pardus
ENSXETG00000016499	-	73	46.939	ENSPTIG00000011553	NPM2	80	46.939	Panthera_tigris_altaica
ENSXETG00000016499	-	73	43.878	ENSPTRG00000020045	NPM2	74	44.554	Pan_troglodytes
ENSXETG00000016499	-	73	42.857	ENSPANG00000031080	NPM2	74	43.564	Papio_anubis
ENSXETG00000016499	-	81	46.226	ENSPKIG00000009700	npm2b	56	45.946	Paramormyrops_kingsleyae
ENSXETG00000016499	-	81	45.192	ENSPKIG00000007241	npm2a	71	45.192	Paramormyrops_kingsleyae
ENSXETG00000016499	-	80	46.729	ENSPSIG00000007722	NPM2	61	44.800	Pelodiscus_sinensis
ENSXETG00000016499	-	73	42.268	ENSPEMG00000013368	Npm2	56	38.983	Peromyscus_maniculatus_bairdii
ENSXETG00000016499	-	85	40.000	ENSPCIG00000012716	-	56	40.000	Phascolarctos_cinereus
ENSXETG00000016499	-	73	44.898	ENSPCOG00000018483	-	74	45.545	Propithecus_coquereli
ENSXETG00000016499	-	73	46.939	ENSPVAG00000009848	NPM2	58	43.443	Pteropus_vampyrus
ENSXETG00000016499	-	77	38.235	ENSPNAG00000001303	npm2b	59	39.286	Pygocentrus_nattereri
ENSXETG00000016499	-	81	51.456	ENSPNAG00000018186	npm2a	76	49.107	Pygocentrus_nattereri
ENSXETG00000016499	-	76	42.268	ENSRNOG00000025638	Npm2	57	38.136	Rattus_norvegicus
ENSXETG00000016499	-	73	41.837	ENSRBIG00000029235	NPM2	74	42.574	Rhinopithecus_bieti
ENSXETG00000016499	-	73	42.857	ENSRROG00000044119	NPM2	74	43.564	Rhinopithecus_roxellana
ENSXETG00000016499	-	73	45.000	ENSSBOG00000025301	NPM2	74	45.631	Saimiri_boliviensis_boliviensis
ENSXETG00000016499	-	57	36.364	ENSSHAG00000017903	-	99	34.444	Sarcophilus_harrisii
ENSXETG00000016499	-	77	45.098	ENSSFOG00015010466	npm2b	65	43.478	Scleropages_formosus
ENSXETG00000016499	-	74	48.454	ENSSPUG00000011509	NPM2	79	45.536	Sphenodon_punctatus
ENSXETG00000016499	-	79	44.762	ENSSSCG00000009610	NPM2	57	44.762	Sus_scrofa
ENSXETG00000016499	-	73	47.959	ENSVVUG00000021949	-	52	47.009	Vulpes_vulpes
ENSXETG00000016499	-	73	42.857	ENSVVUG00000007256	-	52	43.590	Vulpes_vulpes