EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000016701 (Gene tree)
Gene ID: -
Gene Symbol: drosha
Alias: -
Full Name: drosha ribonuclease type III
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 154420 bases
Position: chrGL172793.1:14755-169174
Accession: XB-GENE-494685
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000036419	Ribonuclease_3	PF00636.26	3.9e-42	1	2
ENSXETP00000036419	Ribonuclease_3	PF00636.26	3.9e-42	2	2
ENSXETP00000042676	Ribonuclease_3	PF00636.26	4.4e-42	1	2
ENSXETP00000042676	Ribonuclease_3	PF00636.26	4.4e-42	2	2
ENSXETP00000042676	dsrm	PF00035.26	7.3e-15	1	1
ENSXETP00000036419	dsrm	PF00035.26	7.7e-15	1	1
ENSXETP00000036419	Ribonucleas_3_3	PF14622.6	4.8e-43	1	2
ENSXETP00000036419	Ribonucleas_3_3	PF14622.6	4.8e-43	2	2
ENSXETP00000042676	Ribonucleas_3_3	PF14622.6	5.2e-43	1	2
ENSXETP00000042676	Ribonucleas_3_3	PF14622.6	5.2e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000042676	-	4137	-	ENSXETP00000042676	1378 (aa)	-	F6QMW4
ENSXETT00000036419	-	4012	-	ENSXETP00000036419	1327 (aa)	-	F6YT85

Gene Model

Click here to download ENSXETG00000016701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000016701's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000016701	drosha	88	80.017	ENSG00000113360	DROSHA	95	79.377	Homo_sapiens
ENSXETG00000016701	drosha	88	79.350	ENSAMEG00000006000	DROSHA	86	79.382	Ailuropoda_melanoleuca
ENSXETG00000016701	drosha	72	85.430	ENSACIG00000019308	drosha	95	86.701	Amphilophus_citrinellus
ENSXETG00000016701	drosha	86	77.194	ENSATEG00000021939	drosha	99	71.103	Anabas_testudineus
ENSXETG00000016701	drosha	99	77.754	ENSAPLG00000004372	DROSHA	100	77.396	Anas_platyrhynchos
ENSXETG00000016701	drosha	98	76.090	ENSACAG00000007970	DROSHA	99	73.748	Anolis_carolinensis
ENSXETG00000016701	drosha	88	77.246	ENSANAG00000020506	DROSHA	93	86.625	Aotus_nancymaae
ENSXETG00000016701	drosha	97	72.201	ENSACLG00000012227	drosha	100	68.916	Astatotilapia_calliptera
ENSXETG00000016701	drosha	99	72.033	ENSAMXG00000005582	drosha	99	72.530	Astyanax_mexicanus
ENSXETG00000016701	drosha	99	76.372	ENSBTAG00000017551	DROSHA	85	87.413	Bos_taurus
ENSXETG00000016701	drosha	63	35.756	WBGene00009163	drsh-1	76	36.580	Caenorhabditis_elegans
ENSXETG00000016701	drosha	88	80.017	ENSCJAG00000018881	DROSHA	85	79.668	Callithrix_jacchus
ENSXETG00000016701	drosha	88	80.185	ENSCAFG00020017559	DROSHA	95	91.704	Canis_lupus_dingo
ENSXETG00000016701	drosha	99	74.964	ENSCHIG00000022226	DROSHA	85	87.413	Capra_hircus
ENSXETG00000016701	drosha	88	79.933	ENSCCAG00000027283	DROSHA	93	89.969	Cebus_capucinus
ENSXETG00000016701	drosha	88	79.849	ENSCATG00000016833	DROSHA	93	88.610	Cercocebus_atys
ENSXETG00000016701	drosha	88	80.101	ENSCLAG00000013048	DROSHA	86	80.328	Chinchilla_lanigera
ENSXETG00000016701	drosha	88	79.933	ENSCSAG00000017202	DROSHA	83	80.242	Chlorocebus_sabaeus
ENSXETG00000016701	drosha	54	98.052	ENSCHOG00000011786	DROSHA	70	79.430	Choloepus_hoffmanni
ENSXETG00000016701	drosha	98	96.014	ENSCPBG00000000467	DROSHA	100	86.984	Chrysemys_picta_bellii
ENSXETG00000016701	drosha	63	55.370	ENSCSAVG00000010638	-	99	57.637	Ciona_savignyi
ENSXETG00000016701	drosha	88	79.933	ENSCANG00000035071	DROSHA	94	88.610	Colobus_angolensis_palliatus
ENSXETG00000016701	drosha	89	79.822	ENSCGRG00001008885	Drosha	87	79.735	Cricetulus_griseus_chok1gshd
ENSXETG00000016701	drosha	89	79.822	ENSCGRG00000006944	Drosha	87	79.735	Cricetulus_griseus_crigri
ENSXETG00000016701	drosha	85	76.661	ENSCSEG00000001452	drosha	81	83.093	Cynoglossus_semilaevis
ENSXETG00000016701	drosha	85	77.273	ENSCVAG00000004619	drosha	99	70.515	Cyprinodon_variegatus
ENSXETG00000016701	drosha	81	78.657	ENSDARG00000055563	drosha	86	78.496	Danio_rerio
ENSXETG00000016701	drosha	77	85.393	ENSDNOG00000001537	DROSHA	85	85.005	Dasypus_novemcinctus
ENSXETG00000016701	drosha	88	78.531	ENSDORG00000005624	Drosha	85	80.602	Dipodomys_ordii
ENSXETG00000016701	drosha	88	47.069	FBgn0026722	drosha	73	53.768	Drosophila_melanogaster
ENSXETG00000016701	drosha	84	85.393	ENSETEG00000007814	DROSHA	82	85.393	Echinops_telfairi
ENSXETG00000016701	drosha	50	79.063	ENSEBUG00000005974	-	99	79.063	Eptatretus_burgeri
ENSXETG00000016701	drosha	88	79.933	ENSEASG00005007149	DROSHA	93	77.462	Equus_asinus_asinus
ENSXETG00000016701	drosha	88	79.933	ENSECAG00000013578	DROSHA	90	77.462	Equus_caballus
ENSXETG00000016701	drosha	76	81.998	ENSEEUG00000006351	DROSHA	73	83.152	Erinaceus_europaeus
ENSXETG00000016701	drosha	96	66.521	ENSELUG00000015039	drosha	95	64.975	Esox_lucius
ENSXETG00000016701	drosha	88	80.185	ENSFCAG00000000360	DROSHA	93	77.713	Felis_catus
ENSXETG00000016701	drosha	99	77.433	ENSFALG00000012843	DROSHA	100	75.250	Ficedula_albicollis
ENSXETG00000016701	drosha	88	80.017	ENSFDAG00000018414	DROSHA	86	80.242	Fukomys_damarensis
ENSXETG00000016701	drosha	88	59.784	ENSFHEG00000003840	drosha	96	58.699	Fundulus_heteroclitus
ENSXETG00000016701	drosha	100	77.099	ENSGALG00000012916	DROSHA	100	77.925	Gallus_gallus
ENSXETG00000016701	drosha	85	77.923	ENSGAFG00000016853	drosha	99	69.336	Gambusia_affinis
ENSXETG00000016701	drosha	98	77.509	ENSGAGG00000005621	DROSHA	100	77.483	Gopherus_agassizii
ENSXETG00000016701	drosha	88	80.017	ENSGGOG00000011006	DROSHA	93	88.715	Gorilla_gorilla
ENSXETG00000016701	drosha	94	70.463	ENSHBUG00000015907	drosha	100	71.429	Haplochromis_burtoni
ENSXETG00000016701	drosha	88	80.017	ENSHGLG00000018873	DROSHA	85	80.242	Heterocephalus_glaber_female
ENSXETG00000016701	drosha	88	80.017	ENSHGLG00100015793	DROSHA	84	80.242	Heterocephalus_glaber_male
ENSXETG00000016701	drosha	84	77.181	ENSHCOG00000008454	drosha	95	77.138	Hippocampus_comes
ENSXETG00000016701	drosha	87	76.305	ENSIPUG00000021202	drosha	100	70.996	Ictalurus_punctatus
ENSXETG00000016701	drosha	72	85.522	ENSSTOG00000016323	DROSHA	98	93.974	Ictidomys_tridecemlineatus
ENSXETG00000016701	drosha	98	72.688	ENSJJAG00000019758	Drosha	87	78.713	Jaculus_jaculus
ENSXETG00000016701	drosha	76	85.970	ENSLBEG00000006606	drosha	86	74.785	Labrus_bergylta
ENSXETG00000016701	drosha	99	76.872	ENSLACG00000005937	DROSHA	99	75.519	Latimeria_chalumnae
ENSXETG00000016701	drosha	98	72.111	ENSLOCG00000012852	drosha	99	73.382	Lepisosteus_oculatus
ENSXETG00000016701	drosha	98	75.145	ENSLAFG00000013831	DROSHA	96	79.417	Loxodonta_africana
ENSXETG00000016701	drosha	88	79.933	ENSMFAG00000003055	DROSHA	93	77.129	Macaca_fascicularis
ENSXETG00000016701	drosha	88	79.933	ENSMMUG00000012193	DROSHA	93	90.073	Macaca_mulatta
ENSXETG00000016701	drosha	88	79.933	ENSMNEG00000037529	DROSHA	82	87.512	Macaca_nemestrina
ENSXETG00000016701	drosha	88	74.392	ENSMLEG00000024167	DROSHA	85	74.485	Mandrillus_leucophaeus
ENSXETG00000016701	drosha	87	76.431	ENSMAMG00000012613	drosha	95	85.670	Mastacembelus_armatus
ENSXETG00000016701	drosha	90	83.211	ENSMZEG00005019487	drosha	100	68.916	Maylandia_zebra
ENSXETG00000016701	drosha	100	77.099	ENSMGAG00000005087	DROSHA	100	77.851	Meleagris_gallopavo
ENSXETG00000016701	drosha	89	79.661	ENSMAUG00000002863	Drosha	87	79.570	Mesocricetus_auratus
ENSXETG00000016701	drosha	88	79.331	ENSMICG00000002241	DROSHA	93	86.453	Microcebus_murinus
ENSXETG00000016701	drosha	88	79.756	ENSMOCG00000015044	Drosha	87	79.143	Microtus_ochrogaster
ENSXETG00000016701	drosha	71	81.560	ENSMMOG00000004016	drosha	93	83.003	Mola_mola
ENSXETG00000016701	drosha	98	74.963	ENSMODG00000004807	DROSHA	98	73.619	Monodelphis_domestica
ENSXETG00000016701	drosha	98	72.110	ENSMALG00000010542	drosha	98	80.154	Monopterus_albus
ENSXETG00000016701	drosha	89	78.629	MGP_CAROLIEiJ_G0019687	Drosha	95	89.566	Mus_caroli
ENSXETG00000016701	drosha	89	78.952	ENSMUSG00000022191	Drosha	87	79.421	Mus_musculus
ENSXETG00000016701	drosha	88	79.235	MGP_PahariEiJ_G0016063	Drosha	94	90.178	Mus_pahari
ENSXETG00000016701	drosha	89	79.355	MGP_SPRETEiJ_G0020580	Drosha	95	89.773	Mus_spretus
ENSXETG00000016701	drosha	88	80.211	ENSMPUG00000015237	DROSHA	86	80.183	Mustela_putorius_furo
ENSXETG00000016701	drosha	88	78.496	ENSMLUG00000002581	DROSHA	86	78.257	Myotis_lucifugus
ENSXETG00000016701	drosha	89	72.888	ENSNGAG00000017329	Drosha	86	72.630	Nannospalax_galili
ENSXETG00000016701	drosha	72	68.328	ENSNBRG00000001870	drosha	95	69.846	Neolamprologus_brichardi
ENSXETG00000016701	drosha	88	79.805	ENSNLEG00000013963	DROSHA	93	88.610	Nomascus_leucogenys
ENSXETG00000016701	drosha	68	72.456	ENSMEUG00000002029	DROSHA	75	73.865	Notamacropus_eugenii
ENSXETG00000016701	drosha	85	87.234	ENSOPRG00000010845	DROSHA	68	87.234	Ochotona_princeps
ENSXETG00000016701	drosha	88	79.643	ENSODEG00000001911	DROSHA	86	79.434	Octodon_degus
ENSXETG00000016701	drosha	97	72.103	ENSONIG00000006578	drosha	99	69.247	Oreochromis_niloticus
ENSXETG00000016701	drosha	57	75.450	ENSOANG00000015744	-	99	76.031	Ornithorhynchus_anatinus
ENSXETG00000016701	drosha	98	75.771	ENSOCUG00000000367	DROSHA	84	79.810	Oryctolagus_cuniculus
ENSXETG00000016701	drosha	85	75.784	ENSORLG00000013592	drosha	85	83.284	Oryzias_latipes
ENSXETG00000016701	drosha	72	84.188	ENSORLG00020002854	drosha	95	86.082	Oryzias_latipes_hni
ENSXETG00000016701	drosha	72	83.874	ENSORLG00015003156	drosha	94	86.082	Oryzias_latipes_hsok
ENSXETG00000016701	drosha	85	75.958	ENSOMEG00000001062	drosha	87	76.451	Oryzias_melastigma
ENSXETG00000016701	drosha	89	77.456	ENSOGAG00000005424	DROSHA	97	77.732	Otolemur_garnettii
ENSXETG00000016701	drosha	88	80.017	ENSPPAG00000037526	DROSHA	93	88.217	Pan_paniscus
ENSXETG00000016701	drosha	88	80.185	ENSPPRG00000002687	DROSHA	86	80.673	Panthera_pardus
ENSXETG00000016701	drosha	88	80.185	ENSPTIG00000017523	DROSHA	86	80.673	Panthera_tigris_altaica
ENSXETG00000016701	drosha	88	80.017	ENSPTRG00000016762	DROSHA	93	77.462	Pan_troglodytes
ENSXETG00000016701	drosha	88	79.933	ENSPANG00000003027	DROSHA	93	77.129	Papio_anubis
ENSXETG00000016701	drosha	90	85.117	ENSPKIG00000011514	drosha	100	72.345	Paramormyrops_kingsleyae
ENSXETG00000016701	drosha	98	76.295	ENSPEMG00000000607	Drosha	86	79.817	Peromyscus_maniculatus_bairdii
ENSXETG00000016701	drosha	98	75.584	ENSPCIG00000006010	DROSHA	85	80.928	Phascolarctos_cinereus
ENSXETG00000016701	drosha	81	83.499	ENSPREG00000022302	drosha	87	77.175	Poecilia_reticulata
ENSXETG00000016701	drosha	88	79.805	ENSPPYG00000015370	DROSHA	86	79.767	Pongo_abelii
ENSXETG00000016701	drosha	82	73.228	ENSPCAG00000007190	DROSHA	79	73.228	Procavia_capensis
ENSXETG00000016701	drosha	88	76.826	ENSPCOG00000028511	DROSHA	93	85.998	Propithecus_coquereli
ENSXETG00000016701	drosha	88	76.075	ENSPVAG00000013167	DROSHA	86	76.103	Pteropus_vampyrus
ENSXETG00000016701	drosha	97	72.051	ENSPNYG00000000398	drosha	95	86.082	Pundamilia_nyererei
ENSXETG00000016701	drosha	71	85.549	ENSPNAG00000011876	drosha	93	84.304	Pygocentrus_nattereri
ENSXETG00000016701	drosha	89	78.612	ENSRNOG00000013451	Drosha	87	79.421	Rattus_norvegicus
ENSXETG00000016701	drosha	88	78.775	ENSRBIG00000032786	DROSHA	93	87.043	Rhinopithecus_bieti
ENSXETG00000016701	drosha	88	79.933	ENSRROG00000028199	DROSHA	83	87.512	Rhinopithecus_roxellana
ENSXETG00000016701	drosha	88	80.101	ENSSBOG00000024008	DROSHA	93	88.297	Saimiri_boliviensis_boliviensis
ENSXETG00000016701	drosha	98	74.963	ENSSHAG00000015198	DROSHA	92	89.896	Sarcophilus_harrisii
ENSXETG00000016701	drosha	97	76.466	ENSSFOG00015009776	drosha	90	76.963	Scleropages_formosus
ENSXETG00000016701	drosha	97	70.628	ENSSMAG00000008069	drosha	100	67.870	Scophthalmus_maximus
ENSXETG00000016701	drosha	98	71.175	ENSSDUG00000010944	drosha	95	86.495	Seriola_dumerili
ENSXETG00000016701	drosha	87	75.442	ENSSLDG00000025271	drosha	95	86.598	Seriola_lalandi_dorsalis
ENSXETG00000016701	drosha	70	77.228	ENSSARG00000004436	-	67	76.238	Sorex_araneus
ENSXETG00000016701	drosha	98	73.534	ENSSPUG00000006902	DROSHA	100	73.387	Sphenodon_punctatus
ENSXETG00000016701	drosha	88	79.916	ENSSSCG00000016809	DROSHA	85	87.512	Sus_scrofa
ENSXETG00000016701	drosha	99	76.344	ENSTGUG00000001955	DROSHA	100	75.751	Taeniopygia_guttata
ENSXETG00000016701	drosha	94	70.794	ENSTRUG00000017778	drosha	97	66.667	Takifugu_rubripes
ENSXETG00000016701	drosha	99	71.272	ENSTNIG00000008688	drosha	93	87.422	Tetraodon_nigroviridis
ENSXETG00000016701	drosha	86	70.510	ENSTBEG00000000537	DROSHA	85	76.108	Tupaia_belangeri
ENSXETG00000016701	drosha	88	79.837	ENSTTRG00000004210	DROSHA	86	80.217	Tursiops_truncatus
ENSXETG00000016701	drosha	88	80.017	ENSUAMG00000025257	DROSHA	86	80.673	Ursus_americanus
ENSXETG00000016701	drosha	88	80.017	ENSUMAG00000014097	DROSHA	93	91.704	Ursus_maritimus
ENSXETG00000016701	drosha	80	79.473	ENSVPAG00000011260	DROSHA	99	78.727	Vicugna_pacos
ENSXETG00000016701	drosha	88	80.130	ENSVVUG00000022212	DROSHA	97	91.433	Vulpes_vulpes