EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000016741 (Gene tree)
Gene ID: -
Gene Symbol: elavl3
Alias: -
Full Name: ELAV like neuron-specific RNA binding protein 3
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 15915 bases
Position: chrGL173084.1:178415-194329
Accession: XB-GENE-490864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000019000	RRM_5	PF13893.6	2e-13	1	2
ENSXETP00000019000	RRM_5	PF13893.6	2e-13	2	2
ENSXETP00000036509	RRM_5	PF13893.6	3.9e-13	1	2
ENSXETP00000036509	RRM_5	PF13893.6	3.9e-13	2	2
ENSXETP00000019000	RRM_1	PF00076.22	2.4e-64	1	3
ENSXETP00000019000	RRM_1	PF00076.22	2.4e-64	2	3
ENSXETP00000019000	RRM_1	PF00076.22	2.4e-64	3	3
ENSXETP00000036509	RRM_1	PF00076.22	1.6e-62	1	3
ENSXETP00000036509	RRM_1	PF00076.22	1.6e-62	2	3
ENSXETP00000036509	RRM_1	PF00076.22	1.6e-62	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000036509	-	1607	-	ENSXETP00000036509	343 (aa)	-	F6TG58
ENSXETT00000019000	-	1098	-	ENSXETP00000019000	365 (aa)	-	F6XYR7

Gene Model

Click here to download ENSXETG00000016741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000016741's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000016741	elavl3	90	30.588	ENSXETG00000022831	pabpc1l	61	30.588
ENSXETG00000016741	elavl3	79	42.391	ENSXETG00000009044	celf1	62	42.391
ENSXETG00000016741	elavl3	99	74.938	ENSXETG00000008680	elavl4	99	74.938
ENSXETG00000016741	elavl3	84	39.506	ENSXETG00000014344	celf5	56	39.506
ENSXETG00000016741	elavl3	91	69.968	ENSXETG00000008752	elavl1	95	69.968
ENSXETG00000016741	elavl3	93	37.179	ENSXETG00000010234	tial1	70	37.179
ENSXETG00000016741	elavl3	81	40.217	ENSXETG00000021992	celf2	65	35.065
ENSXETG00000016741	elavl3	64	39.744	ENSXETG00000008514	tia1	70	39.744
ENSXETG00000016741	elavl3	74	40.741	ENSXETG00000020486	celf4	96	35.632
ENSXETG00000016741	elavl3	93	37.349	ENSXETG00000006635	pabpc1	59	37.349
ENSXETG00000016741	elavl3	63	42.029	ENSXETG00000003833	hnrnpa0	51	42.029
ENSXETG00000016741	elavl3	64	36.111	ENSXETG00000003281	cirbp	50	36.111
ENSXETG00000016741	elavl3	60	36.765	ENSXETG00000027221	-	93	36.765
ENSXETG00000016741	elavl3	93	34.940	ENSXETG00000010946	pabpc4	59	34.940
ENSXETG00000016741	elavl3	99	78.075	ENSXETG00000009387	elavl2	100	85.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000016741	elavl3	99	86.104	ENSG00000196361	ELAVL3	99	87.193	Homo_sapiens
ENSXETG00000016741	elavl3	99	92.174	ENSAPOG00000017565	elavl3	99	92.174	Acanthochromis_polyacanthus
ENSXETG00000016741	elavl3	100	83.934	ENSAMEG00000010487	ELAVL3	100	85.042	Ailuropoda_melanoleuca
ENSXETG00000016741	elavl3	99	92.174	ENSACIG00000024190	elavl3	99	92.174	Amphilophus_citrinellus
ENSXETG00000016741	elavl3	99	92.174	ENSAOCG00000005054	elavl3	99	92.174	Amphiprion_ocellaris
ENSXETG00000016741	elavl3	100	91.643	ENSAPEG00000011145	elavl3	100	91.643	Amphiprion_percula
ENSXETG00000016741	elavl3	98	92.082	ENSATEG00000020941	elavl3	99	92.082	Anabas_testudineus
ENSXETG00000016741	elavl3	99	90.685	ENSACAG00000016958	ELAVL3	93	90.685	Anolis_carolinensis
ENSXETG00000016741	elavl3	99	84.973	ENSANAG00000030798	ELAVL3	99	86.066	Aotus_nancymaae
ENSXETG00000016741	elavl3	100	91.643	ENSACLG00000018260	elavl3	100	91.643	Astatotilapia_calliptera
ENSXETG00000016741	elavl3	99	91.837	ENSAMXG00000040498	elavl3	99	91.837	Astyanax_mexicanus
ENSXETG00000016741	elavl3	99	84.741	ENSBTAG00000014412	ELAVL3	99	85.831	Bos_taurus
ENSXETG00000016741	elavl3	99	86.104	ENSCJAG00000005589	ELAVL3	99	87.193	Callithrix_jacchus
ENSXETG00000016741	elavl3	99	86.104	ENSCAFG00000017350	ELAVL3	99	87.193	Canis_familiaris
ENSXETG00000016741	elavl3	100	87.069	ENSCAFG00020004614	ELAVL3	99	86.486	Canis_lupus_dingo
ENSXETG00000016741	elavl3	99	85.831	ENSCHIG00000003436	ELAVL3	100	86.921	Capra_hircus
ENSXETG00000016741	elavl3	99	86.179	ENSTSYG00000036621	ELAVL3	100	87.263	Carlito_syrichta
ENSXETG00000016741	elavl3	91	74.006	ENSCAPG00000017620	ELAVL3	99	75.229	Cavia_aperea
ENSXETG00000016741	elavl3	91	74.006	ENSCPOG00000001793	ELAVL3	99	75.229	Cavia_porcellus
ENSXETG00000016741	elavl3	99	86.104	ENSCCAG00000034350	ELAVL3	99	87.193	Cebus_capucinus
ENSXETG00000016741	elavl3	99	86.104	ENSCATG00000044086	ELAVL3	99	87.193	Cercocebus_atys
ENSXETG00000016741	elavl3	99	86.104	ENSCLAG00000016404	ELAVL3	100	87.193	Chinchilla_lanigera
ENSXETG00000016741	elavl3	96	88.793	ENSCSAG00000006755	ELAVL3	100	89.565	Chlorocebus_sabaeus
ENSXETG00000016741	elavl3	99	91.643	ENSCPBG00000023982	ELAVL3	99	89.646	Chrysemys_picta_bellii
ENSXETG00000016741	elavl3	99	86.104	ENSCANG00000038728	ELAVL3	99	87.193	Colobus_angolensis_palliatus
ENSXETG00000016741	elavl3	99	85.559	ENSCGRG00001018927	Elavl3	99	86.649	Cricetulus_griseus_chok1gshd
ENSXETG00000016741	elavl3	99	85.559	ENSCGRG00000007158	Elavl3	99	86.649	Cricetulus_griseus_crigri
ENSXETG00000016741	elavl3	99	91.545	ENSCSEG00000021095	elavl3	99	91.545	Cynoglossus_semilaevis
ENSXETG00000016741	elavl3	99	92.151	ENSCVAG00000014060	elavl3	99	92.151	Cyprinodon_variegatus
ENSXETG00000016741	elavl3	99	92.442	ENSDARG00000014420	elavl3	99	92.442	Danio_rerio
ENSXETG00000016741	elavl3	99	85.559	ENSDORG00000002538	Elavl3	100	86.649	Dipodomys_ordii
ENSXETG00000016741	elavl3	52	97.059	ENSETEG00000000164	-	57	97.059	Echinops_telfairi
ENSXETG00000016741	elavl3	99	86.104	ENSEASG00005004561	ELAVL3	99	87.193	Equus_asinus_asinus
ENSXETG00000016741	elavl3	98	87.683	ENSECAG00000020594	ELAVL3	100	88.856	Equus_caballus
ENSXETG00000016741	elavl3	99	89.773	ENSELUG00000023043	elavl3	99	89.773	Esox_lucius
ENSXETG00000016741	elavl3	99	86.104	ENSFCAG00000024763	ELAVL3	99	87.193	Felis_catus
ENSXETG00000016741	elavl3	99	84.638	ENSFDAG00000008449	ELAVL3	99	84.638	Fukomys_damarensis
ENSXETG00000016741	elavl3	99	92.151	ENSFHEG00000001675	elavl3	99	92.151	Fundulus_heteroclitus
ENSXETG00000016741	elavl3	99	89.589	ENSGMOG00000003760	elavl3	99	89.589	Gadus_morhua
ENSXETG00000016741	elavl3	50	61.157	ENSGALG00000054488	-	77	63.115	Gallus_gallus
ENSXETG00000016741	elavl3	59	74.419	ENSGALG00000047364	-	100	75.591	Gallus_gallus
ENSXETG00000016741	elavl3	99	88.828	ENSGAFG00000016015	elavl3	99	88.828	Gambusia_affinis
ENSXETG00000016741	elavl3	99	90.368	ENSGACG00000013839	elavl3	99	90.368	Gasterosteus_aculeatus
ENSXETG00000016741	elavl3	87	88.618	ENSGAGG00000016141	ELAVL3	99	92.593	Gopherus_agassizii
ENSXETG00000016741	elavl3	99	86.104	ENSGGOG00000008635	ELAVL3	100	87.193	Gorilla_gorilla
ENSXETG00000016741	elavl3	100	91.643	ENSHBUG00000020978	elavl3	100	91.643	Haplochromis_burtoni
ENSXETG00000016741	elavl3	84	67.586	ENSHGLG00000019379	-	97	67.586	Heterocephalus_glaber_female
ENSXETG00000016741	elavl3	99	86.104	ENSHGLG00000015199	ELAVL3	99	87.193	Heterocephalus_glaber_female
ENSXETG00000016741	elavl3	94	84.527	ENSHGLG00100011200	ELAVL3	99	85.673	Heterocephalus_glaber_male
ENSXETG00000016741	elavl3	99	90.959	ENSHCOG00000015894	elavl3	99	90.959	Hippocampus_comes
ENSXETG00000016741	elavl3	99	92.442	ENSIPUG00000013002	elavl3	98	92.442	Ictalurus_punctatus
ENSXETG00000016741	elavl3	99	86.104	ENSSTOG00000021111	ELAVL3	99	87.193	Ictidomys_tridecemlineatus
ENSXETG00000016741	elavl3	99	86.921	ENSJJAG00000023513	Elavl3	100	86.921	Jaculus_jaculus
ENSXETG00000016741	elavl3	99	92.174	ENSKMAG00000017412	elavl3	99	92.174	Kryptolebias_marmoratus
ENSXETG00000016741	elavl3	99	92.174	ENSLBEG00000008073	elavl3	98	92.174	Labrus_bergylta
ENSXETG00000016741	elavl3	99	91.781	ENSLOCG00000007647	elavl3	99	91.781	Lepisosteus_oculatus
ENSXETG00000016741	elavl3	99	86.450	ENSLAFG00000005013	ELAVL3	99	87.534	Loxodonta_africana
ENSXETG00000016741	elavl3	99	86.104	ENSMFAG00000003692	ELAVL3	99	87.193	Macaca_fascicularis
ENSXETG00000016741	elavl3	99	86.104	ENSMMUG00000020616	ELAVL3	99	87.193	Macaca_mulatta
ENSXETG00000016741	elavl3	99	85.831	ENSMNEG00000043973	ELAVL3	99	86.921	Macaca_nemestrina
ENSXETG00000016741	elavl3	97	81.967	ENSMLEG00000013976	ELAVL3	99	81.967	Mandrillus_leucophaeus
ENSXETG00000016741	elavl3	99	91.570	ENSMAMG00000011697	elavl3	99	91.570	Mastacembelus_armatus
ENSXETG00000016741	elavl3	100	91.643	ENSMZEG00005019053	elavl3	100	91.643	Maylandia_zebra
ENSXETG00000016741	elavl3	99	85.559	ENSMAUG00000016478	Elavl3	100	86.649	Mesocricetus_auratus
ENSXETG00000016741	elavl3	99	86.376	ENSMICG00000016528	ELAVL3	100	87.193	Microcebus_murinus
ENSXETG00000016741	elavl3	99	85.559	ENSMOCG00000002046	Elavl3	99	86.649	Microtus_ochrogaster
ENSXETG00000016741	elavl3	99	92.151	ENSMMOG00000012154	elavl3	99	92.151	Mola_mola
ENSXETG00000016741	elavl3	99	86.992	ENSMODG00000006653	ELAVL3	93	86.992	Monodelphis_domestica
ENSXETG00000016741	elavl3	99	89.344	ENSMALG00000016659	elavl3	99	89.344	Monopterus_albus
ENSXETG00000016741	elavl3	99	85.559	MGP_CAROLIEiJ_G0031894	Elavl3	100	86.188	Mus_caroli
ENSXETG00000016741	elavl3	99	85.559	ENSMUSG00000003410	Elavl3	99	86.649	Mus_musculus
ENSXETG00000016741	elavl3	99	85.286	MGP_PahariEiJ_G0014760	Elavl3	100	85.912	Mus_pahari
ENSXETG00000016741	elavl3	99	85.831	ENSMPUG00000005040	ELAVL3	99	86.921	Mustela_putorius_furo
ENSXETG00000016741	elavl3	99	87.805	ENSMLUG00000016320	ELAVL3	99	87.805	Myotis_lucifugus
ENSXETG00000016741	elavl3	99	86.104	ENSNGAG00000000968	Elavl3	99	87.193	Nannospalax_galili
ENSXETG00000016741	elavl3	99	89.344	ENSNBRG00000010319	elavl3	99	89.344	Neolamprologus_brichardi
ENSXETG00000016741	elavl3	50	80.952	ENSNLEG00000029798	-	95	89.091	Nomascus_leucogenys
ENSXETG00000016741	elavl3	99	90.191	ENSMEUG00000016706	ELAVL3	100	90.191	Notamacropus_eugenii
ENSXETG00000016741	elavl3	88	83.200	ENSOPRG00000007373	ELAVL3	100	87.045	Ochotona_princeps
ENSXETG00000016741	elavl3	99	86.104	ENSODEG00000015790	ELAVL3	99	87.193	Octodon_degus
ENSXETG00000016741	elavl3	99	89.373	ENSONIG00000001538	elavl3	99	89.373	Oreochromis_niloticus
ENSXETG00000016741	elavl3	93	92.157	ENSOANG00000015046	ELAVL3	98	92.157	Ornithorhynchus_anatinus
ENSXETG00000016741	elavl3	99	89.315	ENSORLG00000005379	elavl3	99	89.315	Oryzias_latipes
ENSXETG00000016741	elavl3	99	92.151	ENSORLG00020004570	elavl3	99	92.151	Oryzias_latipes_hni
ENSXETG00000016741	elavl3	98	89.227	ENSORLG00015000662	elavl3	98	89.227	Oryzias_latipes_hsok
ENSXETG00000016741	elavl3	99	92.151	ENSOMEG00000023959	elavl3	99	92.151	Oryzias_melastigma
ENSXETG00000016741	elavl3	99	86.104	ENSOGAG00000007072	ELAVL3	99	87.193	Otolemur_garnettii
ENSXETG00000016741	elavl3	99	85.831	ENSOARG00000018464	ELAVL3	99	86.921	Ovis_aries
ENSXETG00000016741	elavl3	99	86.104	ENSPPAG00000033972	ELAVL3	99	87.193	Pan_paniscus
ENSXETG00000016741	elavl3	99	86.104	ENSPPRG00000005151	ELAVL3	99	87.193	Panthera_pardus
ENSXETG00000016741	elavl3	97	82.421	ENSPTIG00000013610	ELAVL3	97	83.573	Panthera_tigris_altaica
ENSXETG00000016741	elavl3	99	86.104	ENSPTRG00000010506	ELAVL3	99	87.193	Pan_troglodytes
ENSXETG00000016741	elavl3	99	86.104	ENSPANG00000005849	ELAVL3	99	87.193	Papio_anubis
ENSXETG00000016741	elavl3	99	92.442	ENSPKIG00000016207	elavl3	99	92.442	Paramormyrops_kingsleyae
ENSXETG00000016741	elavl3	99	92.151	ENSPMGG00000002016	elavl3	99	92.151	Periophthalmus_magnuspinnatus
ENSXETG00000016741	elavl3	98	84.697	ENSPFOG00000007754	elavl3	100	84.697	Poecilia_formosa
ENSXETG00000016741	elavl3	98	92.082	ENSPLAG00000001547	elavl3	99	92.082	Poecilia_latipinna
ENSXETG00000016741	elavl3	98	92.082	ENSPMEG00000010156	elavl3	99	92.082	Poecilia_mexicana
ENSXETG00000016741	elavl3	99	92.151	ENSPREG00000006971	elavl3	99	92.151	Poecilia_reticulata
ENSXETG00000016741	elavl3	85	79.554	ENSPPYG00000009583	-	98	80.370	Pongo_abelii
ENSXETG00000016741	elavl3	83	87.273	ENSPCAG00000015952	ELAVL3	65	84.848	Procavia_capensis
ENSXETG00000016741	elavl3	99	86.376	ENSPCOG00000023781	ELAVL3	99	87.466	Propithecus_coquereli
ENSXETG00000016741	elavl3	99	86.104	ENSPVAG00000014893	ELAVL3	99	87.193	Pteropus_vampyrus
ENSXETG00000016741	elavl3	100	91.643	ENSPNYG00000013186	elavl3	98	91.643	Pundamilia_nyererei
ENSXETG00000016741	elavl3	100	91.931	ENSPNAG00000003633	elavl3	100	91.931	Pygocentrus_nattereri
ENSXETG00000016741	elavl3	99	85.559	ENSRNOG00000013752	Elavl3	99	86.649	Rattus_norvegicus
ENSXETG00000016741	elavl3	99	86.104	ENSRBIG00000034762	ELAVL3	99	87.193	Rhinopithecus_bieti
ENSXETG00000016741	elavl3	92	85.714	ENSRROG00000034305	ELAVL3	95	89.091	Rhinopithecus_roxellana
ENSXETG00000016741	elavl3	99	86.104	ENSSBOG00000030047	ELAVL3	100	88.217	Saimiri_boliviensis_boliviensis
ENSXETG00000016741	elavl3	96	91.379	ENSSHAG00000005583	ELAVL3	100	92.174	Sarcophilus_harrisii
ENSXETG00000016741	elavl3	97	91.975	ENSSFOG00015023630	elavl3	99	91.975	Scleropages_formosus
ENSXETG00000016741	elavl3	99	91.570	ENSSMAG00000004671	elavl3	99	91.570	Scophthalmus_maximus
ENSXETG00000016741	elavl3	99	92.174	ENSSDUG00000020708	elavl3	99	92.174	Seriola_dumerili
ENSXETG00000016741	elavl3	99	92.174	ENSSLDG00000013769	elavl3	99	92.174	Seriola_lalandi_dorsalis
ENSXETG00000016741	elavl3	99	76.630	ENSSARG00000005949	ELAVL3	100	77.717	Sorex_araneus
ENSXETG00000016741	elavl3	99	92.174	ENSSPAG00000000990	elavl3	99	92.174	Stegastes_partitus
ENSXETG00000016741	elavl3	99	86.104	ENSSSCG00000013617	ELAVL3	99	87.193	Sus_scrofa
ENSXETG00000016741	elavl3	98	92.082	ENSTRUG00000010719	elavl3	99	92.082	Takifugu_rubripes
ENSXETG00000016741	elavl3	99	88.649	ENSTNIG00000018572	elavl3	99	88.649	Tetraodon_nigroviridis
ENSXETG00000016741	elavl3	97	80.303	ENSTBEG00000006133	ELAVL3	100	81.515	Tupaia_belangeri
ENSXETG00000016741	elavl3	99	86.104	ENSTTRG00000001789	ELAVL3	99	87.193	Tursiops_truncatus
ENSXETG00000016741	elavl3	100	85.352	ENSUAMG00000000405	ELAVL3	93	92.000	Ursus_americanus
ENSXETG00000016741	elavl3	98	80.323	ENSUMAG00000019546	ELAVL3	88	81.613	Ursus_maritimus
ENSXETG00000016741	elavl3	99	85.014	ENSVVUG00000023733	ELAVL3	99	86.104	Vulpes_vulpes
ENSXETG00000016741	elavl3	99	92.151	ENSXMAG00000018287	elavl3	99	92.151	Xiphophorus_maculatus