EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000016882 (Gene tree)
Gene ID: -
Gene Symbol: larp4b
Alias: -
Full Name: Xenopus tropicalis La ribonucleoprotein domain family member 4B (larp4b)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 42743 bases
Position: chrGL172770.1:614375-657117
Accession: NM_001130268
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000036781	La	PF05383.17	2.8e-13	1	1
ENSXETP00000036780	La	PF05383.17	3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000036781	-	2911	-	ENSXETP00000036781	725 (aa)	-	F6U5T0
ENSXETT00000036780	-	2992	-	ENSXETP00000036780	752 (aa)	-	F6U5U0

Gene Model

Click here to download ENSXETG00000016882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000016882's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000016882	larp4b	80	40.093	ENSXETG00000007283	larp4	94	39.334

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000016882	larp4b	100	68.609	ENSG00000107929	LARP4B	99	68.609	Homo_sapiens
ENSXETG00000016882	larp4b	81	64.735	ENSAPOG00000020531	LARP4B	91	64.735	Acanthochromis_polyacanthus
ENSXETG00000016882	larp4b	100	68.344	ENSAMEG00000001810	LARP4B	99	68.477	Ailuropoda_melanoleuca
ENSXETG00000016882	larp4b	93	56.734	ENSAOCG00000007887	-	76	88.276	Amphiprion_ocellaris
ENSXETG00000016882	larp4b	94	61.740	ENSAPEG00000002512	LARP4B	96	60.881	Amphiprion_percula
ENSXETG00000016882	larp4b	100	59.847	ENSATEG00000012614	LARP4B	99	59.847	Anabas_testudineus
ENSXETG00000016882	larp4b	100	78.638	ENSAPLG00000003813	LARP4B	98	78.638	Anas_platyrhynchos
ENSXETG00000016882	larp4b	100	78.404	ENSACAG00000002858	LARP4B	99	78.404	Anolis_carolinensis
ENSXETG00000016882	larp4b	100	68.079	ENSANAG00000007531	-	99	68.079	Aotus_nancymaae
ENSXETG00000016882	larp4b	100	60.462	ENSACLG00000026356	LARP4B	99	60.283	Astatotilapia_calliptera
ENSXETG00000016882	larp4b	96	55.961	ENSAMXG00000003335	larp4b	97	55.680	Astyanax_mexicanus
ENSXETG00000016882	larp4b	100	69.536	ENSBTAG00000013899	LARP4B	99	69.536	Bos_taurus
ENSXETG00000016882	larp4b	100	68.079	ENSCJAG00000018434	LARP4B	99	68.079	Callithrix_jacchus
ENSXETG00000016882	larp4b	100	68.874	ENSCAFG00020004209	LARP4B	99	73.986	Canis_lupus_dingo
ENSXETG00000016882	larp4b	100	67.239	ENSCHIG00000013543	LARP4B	99	67.239	Capra_hircus
ENSXETG00000016882	larp4b	81	74.874	ENSTSYG00000002568	LARP4B	99	75.042	Carlito_syrichta
ENSXETG00000016882	larp4b	90	67.688	ENSCAPG00000009725	LARP4B	89	67.688	Cavia_aperea
ENSXETG00000016882	larp4b	100	69.934	ENSCPOG00000009375	LARP4B	99	69.934	Cavia_porcellus
ENSXETG00000016882	larp4b	100	67.815	ENSCCAG00000024869	LARP4B	99	67.947	Cebus_capucinus
ENSXETG00000016882	larp4b	100	69.007	ENSCATG00000019750	LARP4B	99	69.007	Cercocebus_atys
ENSXETG00000016882	larp4b	100	71.644	ENSCLAG00000011570	LARP4B	99	71.644	Chinchilla_lanigera
ENSXETG00000016882	larp4b	61	96.296	ENSCHOG00000007831	-	63	96.296	Choloepus_hoffmanni
ENSXETG00000016882	larp4b	100	80.330	ENSCPBG00000017063	LARP4B	99	80.330	Chrysemys_picta_bellii
ENSXETG00000016882	larp4b	100	66.887	ENSCANG00000038021	LARP4B	99	66.887	Colobus_angolensis_palliatus
ENSXETG00000016882	larp4b	100	70.674	ENSCGRG00001022930	Larp4b	99	74.271	Cricetulus_griseus_chok1gshd
ENSXETG00000016882	larp4b	100	70.674	ENSCGRG00000006022	Larp4b	99	74.271	Cricetulus_griseus_crigri
ENSXETG00000016882	larp4b	99	57.873	ENSCSEG00000007342	LARP4B	99	57.739	Cynoglossus_semilaevis
ENSXETG00000016882	larp4b	100	57.303	ENSCVAG00000008910	LARP4B	99	58.612	Cyprinodon_variegatus
ENSXETG00000016882	larp4b	94	53.576	ENSDARG00000062146	larp4b	95	54.482	Danio_rerio
ENSXETG00000016882	larp4b	96	72.753	ENSDNOG00000045543	-	100	76.031	Dasypus_novemcinctus
ENSXETG00000016882	larp4b	100	66.534	ENSDORG00000009328	Larp4b	99	70.103	Dipodomys_ordii
ENSXETG00000016882	larp4b	88	70.029	ENSETEG00000011249	LARP4B	90	70.029	Echinops_telfairi
ENSXETG00000016882	larp4b	100	69.067	ENSEASG00005019068	-	99	69.272	Equus_asinus_asinus
ENSXETG00000016882	larp4b	100	68.800	ENSECAG00000024040	LARP4B	99	69.007	Equus_caballus
ENSXETG00000016882	larp4b	100	66.579	ENSEEUG00000008391	LARP4B	98	66.711	Erinaceus_europaeus
ENSXETG00000016882	larp4b	89	41.248	ENSELUG00000001417	-	94	40.944	Esox_lucius
ENSXETG00000016882	larp4b	97	60.000	ENSELUG00000008626	LARP4B	99	59.588	Esox_lucius
ENSXETG00000016882	larp4b	100	68.560	ENSFCAG00000000721	-	99	68.254	Felis_catus
ENSXETG00000016882	larp4b	100	78.984	ENSFALG00000006961	LARP4B	99	78.984	Ficedula_albicollis
ENSXETG00000016882	larp4b	100	69.444	ENSFDAG00000006158	LARP4B	96	69.444	Fukomys_damarensis
ENSXETG00000016882	larp4b	97	52.497	ENSFHEG00000013037	LARP4B	65	92.437	Fundulus_heteroclitus
ENSXETG00000016882	larp4b	66	36.768	ENSFHEG00000011539	-	95	37.074	Fundulus_heteroclitus
ENSXETG00000016882	larp4b	78	62.864	ENSGMOG00000010818	-	89	64.078	Gadus_morhua
ENSXETG00000016882	larp4b	100	80.438	ENSGALG00000006672	LARP4B	99	80.438	Gallus_gallus
ENSXETG00000016882	larp4b	100	58.418	ENSGACG00000017535	LARP4B	98	58.418	Gasterosteus_aculeatus
ENSXETG00000016882	larp4b	94	79.032	ENSGAGG00000008598	LARP4B	99	79.032	Gopherus_agassizii
ENSXETG00000016882	larp4b	100	68.874	ENSGGOG00000003572	LARP4B	99	68.874	Gorilla_gorilla
ENSXETG00000016882	larp4b	100	60.077	ENSHBUG00000007535	LARP4B	99	59.897	Haplochromis_burtoni
ENSXETG00000016882	larp4b	100	69.657	ENSHGLG00000012936	LARP4B	99	74.941	Heterocephalus_glaber_female
ENSXETG00000016882	larp4b	100	69.709	ENSHGLG00100016220	-	99	69.709	Heterocephalus_glaber_male
ENSXETG00000016882	larp4b	88	60.462	ENSHGLG00100017261	-	100	60.462	Heterocephalus_glaber_male
ENSXETG00000016882	larp4b	90	60.256	ENSHCOG00000011581	LARP4B	86	60.256	Hippocampus_comes
ENSXETG00000016882	larp4b	95	54.802	ENSIPUG00000009705	larp4b	97	54.108	Ictalurus_punctatus
ENSXETG00000016882	larp4b	100	68.956	ENSSTOG00000000587	LARP4B	99	76.134	Ictidomys_tridecemlineatus
ENSXETG00000016882	larp4b	100	69.934	ENSJJAG00000020847	Larp4b	99	69.934	Jaculus_jaculus
ENSXETG00000016882	larp4b	100	59.796	ENSKMAG00000021674	LARP4B	99	59.667	Kryptolebias_marmoratus
ENSXETG00000016882	larp4b	79	65.541	ENSLBEG00000025293	-	81	65.936	Labrus_bergylta
ENSXETG00000016882	larp4b	94	71.470	ENSLACG00000009492	LARP4B	99	71.470	Latimeria_chalumnae
ENSXETG00000016882	larp4b	100	70.556	ENSLOCG00000012290	larp4b	99	70.963	Lepisosteus_oculatus
ENSXETG00000016882	larp4b	100	71.146	ENSLAFG00000015334	LARP4B	99	72.159	Loxodonta_africana
ENSXETG00000016882	larp4b	100	68.874	ENSMFAG00000001766	LARP4B	99	66.755	Macaca_fascicularis
ENSXETG00000016882	larp4b	100	68.874	ENSMMUG00000005279	LARP4B	99	68.874	Macaca_mulatta
ENSXETG00000016882	larp4b	100	68.742	ENSMNEG00000014019	LARP4B	99	66.623	Macaca_nemestrina
ENSXETG00000016882	larp4b	100	68.783	ENSMLEG00000035198	LARP4B	99	68.783	Mandrillus_leucophaeus
ENSXETG00000016882	larp4b	100	59.923	ENSMAMG00000013742	LARP4B	99	59.539	Mastacembelus_armatus
ENSXETG00000016882	larp4b	94	58.639	ENSMZEG00005014594	-	99	58.447	Maylandia_zebra
ENSXETG00000016882	larp4b	86	86.667	ENSMZEG00005006498	-	92	89.286	Maylandia_zebra
ENSXETG00000016882	larp4b	100	75.033	ENSMGAG00000005472	LARP4B	99	75.033	Meleagris_gallopavo
ENSXETG00000016882	larp4b	100	70.580	ENSMAUG00000021657	Larp4b	99	74.271	Mesocricetus_auratus
ENSXETG00000016882	larp4b	100	68.450	ENSMICG00000001301	LARP4B	99	68.587	Microcebus_murinus
ENSXETG00000016882	larp4b	90	73.070	ENSMOCG00000021452	Larp4b	99	73.070	Microtus_ochrogaster
ENSXETG00000016882	larp4b	87	89.655	ENSMMOG00000011253	-	94	89.286	Mola_mola
ENSXETG00000016882	larp4b	100	72.297	ENSMODG00000005957	LARP4B	99	72.297	Monodelphis_domestica
ENSXETG00000016882	larp4b	95	52.958	ENSMALG00000012432	LARP4B	98	56.195	Monopterus_albus
ENSXETG00000016882	larp4b	100	70.238	MGP_CAROLIEiJ_G0018216	Larp4b	99	73.986	Mus_caroli
ENSXETG00000016882	larp4b	100	69.789	ENSMUSG00000033499	Larp4b	99	73.634	Mus_musculus
ENSXETG00000016882	larp4b	100	70.106	MGP_PahariEiJ_G0019266	Larp4b	99	73.986	Mus_pahari
ENSXETG00000016882	larp4b	100	69.657	MGP_SPRETEiJ_G0019074	Larp4b	99	73.634	Mus_spretus
ENSXETG00000016882	larp4b	100	68.344	ENSMPUG00000016220	LARP4B	97	68.609	Mustela_putorius_furo
ENSXETG00000016882	larp4b	96	67.000	ENSMLUG00000005880	LARP4B	99	67.429	Myotis_lucifugus
ENSXETG00000016882	larp4b	100	68.212	ENSNGAG00000001750	Larp4b	99	68.212	Nannospalax_galili
ENSXETG00000016882	larp4b	86	86.667	ENSNBRG00000020018	LARP4B	92	89.655	Neolamprologus_brichardi
ENSXETG00000016882	larp4b	100	68.609	ENSNLEG00000013442	LARP4B	99	68.742	Nomascus_leucogenys
ENSXETG00000016882	larp4b	83	62.331	ENSMEUG00000013114	-	83	62.331	Notamacropus_eugenii
ENSXETG00000016882	larp4b	100	67.323	ENSOPRG00000003300	LARP4B	99	67.323	Ochotona_princeps
ENSXETG00000016882	larp4b	100	66.358	ENSODEG00000001109	LARP4B	99	69.707	Octodon_degus
ENSXETG00000016882	larp4b	100	60.332	ENSONIG00000017705	LARP4B	99	60.714	Oreochromis_niloticus
ENSXETG00000016882	larp4b	100	72.680	ENSOANG00000006100	LARP4B	99	72.810	Ornithorhynchus_anatinus
ENSXETG00000016882	larp4b	100	68.211	ENSOCUG00000004950	LARP4B	97	68.211	Oryctolagus_cuniculus
ENSXETG00000016882	larp4b	100	59.202	ENSORLG00000006080	LARP4B	99	58.945	Oryzias_latipes
ENSXETG00000016882	larp4b	100	58.718	ENSORLG00020020940	LARP4B	99	58.462	Oryzias_latipes_hni
ENSXETG00000016882	larp4b	100	58.634	ENSORLG00015020608	LARP4B	99	58.376	Oryzias_latipes_hsok
ENSXETG00000016882	larp4b	100	58.355	ENSOMEG00000019619	LARP4B	99	58.612	Oryzias_melastigma
ENSXETG00000016882	larp4b	96	68.661	ENSOGAG00000011540	LARP4B	99	68.661	Otolemur_garnettii
ENSXETG00000016882	larp4b	100	66.711	ENSOARG00000015320	LARP4B	98	66.711	Ovis_aries
ENSXETG00000016882	larp4b	100	68.609	ENSPPAG00000039232	LARP4B	99	68.609	Pan_paniscus
ENSXETG00000016882	larp4b	100	69.007	ENSPPRG00000009489	LARP4B	99	69.139	Panthera_pardus
ENSXETG00000016882	larp4b	100	68.874	ENSPTIG00000008543	LARP4B	99	69.007	Panthera_tigris_altaica
ENSXETG00000016882	larp4b	100	68.609	ENSPTRG00000002235	LARP4B	99	68.609	Pan_troglodytes
ENSXETG00000016882	larp4b	100	68.874	ENSPANG00000023546	LARP4B	99	66.755	Papio_anubis
ENSXETG00000016882	larp4b	98	61.685	ENSPKIG00000012368	LARP4B	98	61.413	Paramormyrops_kingsleyae
ENSXETG00000016882	larp4b	76	86.032	ENSPSIG00000005600	LARP4B	99	86.032	Pelodiscus_sinensis
ENSXETG00000016882	larp4b	89	55.294	ENSPMGG00000008261	LARP4B	83	54.599	Periophthalmus_magnuspinnatus
ENSXETG00000016882	larp4b	100	69.934	ENSPEMG00000014052	Larp4b	99	69.934	Peromyscus_maniculatus_bairdii
ENSXETG00000016882	larp4b	98	59.162	ENSPFOG00000000029	LARP4B	98	59.477	Poecilia_formosa
ENSXETG00000016882	larp4b	98	59.864	ENSPLAG00000002871	LARP4B	98	59.608	Poecilia_latipinna
ENSXETG00000016882	larp4b	98	59.216	ENSPMEG00000016361	LARP4B	98	59.530	Poecilia_mexicana
ENSXETG00000016882	larp4b	100	68.783	ENSPPYG00000002035	LARP4B	97	68.783	Pongo_abelii
ENSXETG00000016882	larp4b	100	68.091	ENSPCOG00000014688	LARP4B	99	68.091	Propithecus_coquereli
ENSXETG00000016882	larp4b	81	66.723	ENSPVAG00000009784	LARP4B	83	66.891	Pteropus_vampyrus
ENSXETG00000016882	larp4b	100	60.334	ENSPNYG00000024252	LARP4B	99	60.154	Pundamilia_nyererei
ENSXETG00000016882	larp4b	96	55.274	ENSPNAG00000028956	larp4b	97	54.712	Pygocentrus_nattereri
ENSXETG00000016882	larp4b	100	69.600	ENSRNOG00000015888	Larp4b	100	69.733	Rattus_norvegicus
ENSXETG00000016882	larp4b	100	68.742	ENSRBIG00000033294	LARP4B	99	68.742	Rhinopithecus_bieti
ENSXETG00000016882	larp4b	100	68.742	ENSRROG00000033879	LARP4B	99	68.742	Rhinopithecus_roxellana
ENSXETG00000016882	larp4b	100	63.046	ENSSBOG00000021109	LARP4B	99	63.046	Saimiri_boliviensis_boliviensis
ENSXETG00000016882	larp4b	100	73.735	ENSSHAG00000013392	LARP4B	99	73.735	Sarcophilus_harrisii
ENSXETG00000016882	larp4b	96	63.445	ENSSFOG00015003256	LARP4B	90	63.674	Scleropages_formosus
ENSXETG00000016882	larp4b	80	92.593	ENSSMAG00000005982	-	96	92.593	Scophthalmus_maximus
ENSXETG00000016882	larp4b	100	59.772	ENSSDUG00000006704	LARP4B	99	59.566	Seriola_dumerili
ENSXETG00000016882	larp4b	86	74.286	ENSSLDG00000020660	LARP4B	96	74.286	Seriola_lalandi_dorsalis
ENSXETG00000016882	larp4b	64	90.196	ENSSARG00000001243	-	78	90.196	Sorex_araneus
ENSXETG00000016882	larp4b	100	75.344	ENSSPUG00000002102	-	99	75.344	Sphenodon_punctatus
ENSXETG00000016882	larp4b	89	80.952	ENSSPUG00000013734	-	99	80.952	Sphenodon_punctatus
ENSXETG00000016882	larp4b	87	93.103	ENSSPAG00000014628	LARP4B	93	93.103	Stegastes_partitus
ENSXETG00000016882	larp4b	100	67.020	ENSSSCG00000011162	LARP4B	97	71.572	Sus_scrofa
ENSXETG00000016882	larp4b	100	78.095	ENSTGUG00000000811	-	99	78.095	Taeniopygia_guttata
ENSXETG00000016882	larp4b	100	55.683	ENSTNIG00000007991	LARP4B	99	57.797	Tetraodon_nigroviridis
ENSXETG00000016882	larp4b	100	57.455	ENSTNIG00000004571	-	98	57.584	Tetraodon_nigroviridis
ENSXETG00000016882	larp4b	88	71.344	ENSTTRG00000011151	LARP4B	90	71.344	Tursiops_truncatus
ENSXETG00000016882	larp4b	87	70.061	ENSUAMG00000016461	LARP4B	95	70.061	Ursus_americanus
ENSXETG00000016882	larp4b	100	68.874	ENSUMAG00000016127	LARP4B	99	69.007	Ursus_maritimus
ENSXETG00000016882	larp4b	100	68.609	ENSVVUG00000008641	LARP4B	99	73.508	Vulpes_vulpes
ENSXETG00000016882	larp4b	98	54.079	ENSXCOG00000019952	LARP4B	68	87.402	Xiphophorus_couchianus
ENSXETG00000016882	larp4b	98	59.396	ENSXMAG00000021533	LARP4B	98	59.580	Xiphophorus_maculatus