EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000016899 (Gene tree)
Gene ID: -
Gene Symbol: noct
Alias: -
Full Name: Xenopus tropicalis nocturnin (noct)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 13758 bases
Position: chrGL172652.1:1648825-1662582
Accession: NM_001016531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000048066	Exo_endo_phos	PF03372.23	1.8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000048066	-	1969	-	ENSXETP00000048066	458 (aa)	-	Q28CV0

Gene Model

Click here to download ENSXETG00000016899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000016899's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000016899	noct	80	78.689	ENSG00000151014	NOCT	86	78.495	Homo_sapiens
ENSXETG00000016899	noct	79	62.703	ENSAPOG00000005454	noctb	99	62.703	Acanthochromis_polyacanthus
ENSXETG00000016899	noct	85	61.235	ENSAPOG00000016421	nocta	84	62.694	Acanthochromis_polyacanthus
ENSXETG00000016899	noct	81	78.706	ENSAMEG00000011061	NOCT	97	78.495	Ailuropoda_melanoleuca
ENSXETG00000016899	noct	70	62.691	ENSACIG00000013054	noctb	79	62.691	Amphilophus_citrinellus
ENSXETG00000016899	noct	79	59.845	ENSAOCG00000005363	noctb	99	59.845	Amphiprion_ocellaris
ENSXETG00000016899	noct	99	56.025	ENSAOCG00000014089	nocta	99	56.237	Amphiprion_ocellaris
ENSXETG00000016899	noct	79	60.104	ENSAPEG00000015529	noctb	99	60.104	Amphiprion_percula
ENSXETG00000016899	noct	99	56.356	ENSAPEG00000018097	nocta	99	56.356	Amphiprion_percula
ENSXETG00000016899	noct	78	59.375	ENSATEG00000022975	noctb	99	59.896	Anabas_testudineus
ENSXETG00000016899	noct	81	63.660	ENSATEG00000015612	nocta	94	63.660	Anabas_testudineus
ENSXETG00000016899	noct	82	77.540	ENSACAG00000001961	NOCT	99	77.540	Anolis_carolinensis
ENSXETG00000016899	noct	82	77.660	ENSANAG00000009701	NOCT	100	69.432	Aotus_nancymaae
ENSXETG00000016899	noct	79	59.079	ENSACLG00000010843	noctb	97	59.079	Astatotilapia_calliptera
ENSXETG00000016899	noct	97	54.185	ENSAMXG00000002383	nocta	84	61.333	Astyanax_mexicanus
ENSXETG00000016899	noct	81	78.016	ENSBTAG00000005998	NOCT	87	78.016	Bos_taurus
ENSXETG00000016899	noct	84	77.023	ENSCJAG00000003158	NOCT	88	77.454	Callithrix_jacchus
ENSXETG00000016899	noct	80	77.869	ENSCAFG00000003725	NOCT	100	77.869	Canis_familiaris
ENSXETG00000016899	noct	87	75.000	ENSCAFG00020020824	NOCT	89	77.926	Canis_lupus_dingo
ENSXETG00000016899	noct	81	78.016	ENSCHIG00000023612	NOCT	70	78.016	Capra_hircus
ENSXETG00000016899	noct	67	75.081	ENSTSYG00000032273	NOCT	98	75.081	Carlito_syrichta
ENSXETG00000016899	noct	82	77.984	ENSCAPG00000005005	NOCT	96	77.984	Cavia_aperea
ENSXETG00000016899	noct	82	78.610	ENSCPOG00000003827	NOCT	100	68.240	Cavia_porcellus
ENSXETG00000016899	noct	82	77.660	ENSCCAG00000022628	NOCT	87	77.454	Cebus_capucinus
ENSXETG00000016899	noct	84	56.736	ENSCATG00000012533	-	94	56.992	Cercocebus_atys
ENSXETG00000016899	noct	81	77.898	ENSCATG00000041737	-	87	77.719	Cercocebus_atys
ENSXETG00000016899	noct	84	76.104	ENSCLAG00000003384	NOCT	93	77.454	Chinchilla_lanigera
ENSXETG00000016899	noct	80	77.869	ENSCSAG00000003545	NOCT	100	77.869	Chlorocebus_sabaeus
ENSXETG00000016899	noct	80	77.174	ENSCHOG00000004354	NOCT	100	77.174	Choloepus_hoffmanni
ENSXETG00000016899	noct	100	70.362	ENSCPBG00000027624	NOCT	92	70.064	Chrysemys_picta_bellii
ENSXETG00000016899	noct	84	67.273	ENSCANG00000039017	-	98	67.717	Colobus_angolensis_palliatus
ENSXETG00000016899	noct	81	77.898	ENSCANG00000031969	-	87	77.719	Colobus_angolensis_palliatus
ENSXETG00000016899	noct	100	66.812	ENSCGRG00001021050	Noct	88	75.066	Cricetulus_griseus_chok1gshd
ENSXETG00000016899	noct	82	75.266	ENSCGRG00000014052	Noct	98	75.066	Cricetulus_griseus_crigri
ENSXETG00000016899	noct	79	59.467	ENSCSEG00000014449	noctb	97	59.467	Cynoglossus_semilaevis
ENSXETG00000016899	noct	85	59.259	ENSCVAG00000001857	nocta	90	60.982	Cyprinodon_variegatus
ENSXETG00000016899	noct	79	60.317	ENSCVAG00000001093	noctb	98	60.317	Cyprinodon_variegatus
ENSXETG00000016899	noct	81	61.942	ENSDARG00000077726	nocta	87	61.942	Danio_rerio
ENSXETG00000016899	noct	79	63.073	ENSDARG00000078525	noctb	99	63.073	Danio_rerio
ENSXETG00000016899	noct	81	78.167	ENSDNOG00000036912	NOCT	87	77.984	Dasypus_novemcinctus
ENSXETG00000016899	noct	85	73.469	ENSDORG00000000869	Noct	100	76.965	Dipodomys_ordii
ENSXETG00000016899	noct	82	41.565	FBgn0261808	cu	90	41.667	Drosophila_melanogaster
ENSXETG00000016899	noct	81	78.763	ENSEASG00005007871	NOCT	87	78.515	Equus_asinus_asinus
ENSXETG00000016899	noct	81	78.763	ENSECAG00000022676	NOCT	92	78.016	Equus_caballus
ENSXETG00000016899	noct	51	79.060	ENSEEUG00000010558	-	99	79.060	Erinaceus_europaeus
ENSXETG00000016899	noct	59	79.044	ENSEEUG00000013650	-	100	79.044	Erinaceus_europaeus
ENSXETG00000016899	noct	79	59.788	ENSELUG00000011415	noctb	87	60.053	Esox_lucius
ENSXETG00000016899	noct	99	53.799	ENSELUG00000002538	nocta	98	65.041	Esox_lucius
ENSXETG00000016899	noct	81	78.167	ENSFCAG00000030026	NOCT	100	69.130	Felis_catus
ENSXETG00000016899	noct	80	78.962	ENSFALG00000004876	NOCT	100	78.962	Ficedula_albicollis
ENSXETG00000016899	noct	60	82.671	ENSFDAG00000018163	NOCT	100	82.671	Fukomys_damarensis
ENSXETG00000016899	noct	79	58.701	ENSFHEG00000013623	noctb	99	58.701	Fundulus_heteroclitus
ENSXETG00000016899	noct	91	58.676	ENSFHEG00000005067	nocta	98	58.447	Fundulus_heteroclitus
ENSXETG00000016899	noct	80	80.163	ENSGALG00000032957	NOCT	95	79.946	Gallus_gallus
ENSXETG00000016899	noct	79	59.055	ENSGAFG00000015232	noctb	99	59.055	Gambusia_affinis
ENSXETG00000016899	noct	83	61.856	ENSGAFG00000019587	nocta	87	62.404	Gambusia_affinis
ENSXETG00000016899	noct	80	79.781	ENSGAGG00000004412	NOCT	100	79.781	Gopherus_agassizii
ENSXETG00000016899	noct	62	82.270	ENSGGOG00000028610	-	85	83.394	Gorilla_gorilla
ENSXETG00000016899	noct	71	61.862	ENSHBUG00000001687	noctb	91	61.862	Haplochromis_burtoni
ENSXETG00000016899	noct	84	75.325	ENSHGLG00000019383	NOCT	93	76.658	Heterocephalus_glaber_female
ENSXETG00000016899	noct	82	77.394	ENSHGLG00100012584	NOCT	99	77.188	Heterocephalus_glaber_male
ENSXETG00000016899	noct	79	59.299	ENSHCOG00000013999	noctb	99	59.299	Hippocampus_comes
ENSXETG00000016899	noct	98	55.508	ENSHCOG00000005299	nocta	99	55.269	Hippocampus_comes
ENSXETG00000016899	noct	99	52.620	ENSIPUG00000017932	Ccrn4l	84	59.409	Ictalurus_punctatus
ENSXETG00000016899	noct	80	78.261	ENSSTOG00000014818	NOCT	100	78.261	Ictidomys_tridecemlineatus
ENSXETG00000016899	noct	100	67.974	ENSJJAG00000019776	Noct	100	67.974	Jaculus_jaculus
ENSXETG00000016899	noct	84	56.204	ENSKMAG00000019996	noctb	82	57.801	Kryptolebias_marmoratus
ENSXETG00000016899	noct	91	58.314	ENSKMAG00000001493	nocta	88	62.374	Kryptolebias_marmoratus
ENSXETG00000016899	noct	79	52.186	ENSLBEG00000021526	-	97	52.186	Labrus_bergylta
ENSXETG00000016899	noct	94	58.837	ENSLBEG00000024022	nocta	95	59.508	Labrus_bergylta
ENSXETG00000016899	noct	79	61.780	ENSLBEG00000017977	noctb	99	61.780	Labrus_bergylta
ENSXETG00000016899	noct	86	73.350	ENSLACG00000015874	NOCT	100	67.100	Latimeria_chalumnae
ENSXETG00000016899	noct	100	63.261	ENSLOCG00000010593	nocta	100	63.261	Lepisosteus_oculatus
ENSXETG00000016899	noct	81	78.320	ENSLAFG00000017184	NOCT	100	78.320	Loxodonta_africana
ENSXETG00000016899	noct	96	69.932	ENSMFAG00000002713	-	98	69.932	Macaca_fascicularis
ENSXETG00000016899	noct	87	62.750	ENSMFAG00000045037	-	94	65.252	Macaca_fascicularis
ENSXETG00000016899	noct	80	78.142	ENSMMUG00000004983	-	100	78.142	Macaca_mulatta
ENSXETG00000016899	noct	84	67.532	ENSMMUG00000030791	-	94	67.989	Macaca_mulatta
ENSXETG00000016899	noct	84	57.254	ENSMNEG00000007123	-	94	57.520	Macaca_nemestrina
ENSXETG00000016899	noct	96	69.932	ENSMNEG00000042407	-	98	69.932	Macaca_nemestrina
ENSXETG00000016899	noct	80	57.337	ENSMLEG00000029801	-	100	57.337	Mandrillus_leucophaeus
ENSXETG00000016899	noct	96	69.932	ENSMLEG00000040699	-	98	69.932	Mandrillus_leucophaeus
ENSXETG00000016899	noct	79	60.154	ENSMAMG00000006732	noctb	98	60.154	Mastacembelus_armatus
ENSXETG00000016899	noct	87	60.482	ENSMAMG00000002501	nocta	90	62.183	Mastacembelus_armatus
ENSXETG00000016899	noct	79	56.693	ENSMZEG00005011616	noctb	97	56.693	Maylandia_zebra
ENSXETG00000016899	noct	80	80.435	ENSMGAG00000002778	NOCT	98	78.421	Meleagris_gallopavo
ENSXETG00000016899	noct	80	76.230	ENSMAUG00000013688	Noct	100	76.230	Mesocricetus_auratus
ENSXETG00000016899	noct	80	77.869	ENSMICG00000046478	NOCT	100	77.869	Microcebus_murinus
ENSXETG00000016899	noct	81	76.280	ENSMOCG00000013676	Noct	87	75.862	Microtus_ochrogaster
ENSXETG00000016899	noct	79	57.143	ENSMMOG00000006622	noctb	99	57.143	Mola_mola
ENSXETG00000016899	noct	81	62.629	ENSMMOG00000001406	nocta	97	62.887	Mola_mola
ENSXETG00000016899	noct	82	77.273	ENSMODG00000000087	NOCT	100	67.603	Monodelphis_domestica
ENSXETG00000016899	noct	86	57.783	ENSMALG00000000329	nocta	83	60.152	Monopterus_albus
ENSXETG00000016899	noct	79	60.000	ENSMALG00000021977	noctb	99	60.000	Monopterus_albus
ENSXETG00000016899	noct	81	76.280	MGP_CAROLIEiJ_G0024971	Noct	88	75.862	Mus_caroli
ENSXETG00000016899	noct	81	76.550	ENSMUSG00000023087	Noct	100	76.503	Mus_musculus
ENSXETG00000016899	noct	100	67.686	MGP_PahariEiJ_G0026412	Noct	88	76.127	Mus_pahari
ENSXETG00000016899	noct	81	76.550	MGP_SPRETEiJ_G0025906	Noct	88	76.127	Mus_spretus
ENSXETG00000016899	noct	80	78.415	ENSMPUG00000016137	NOCT	100	78.415	Mustela_putorius_furo
ENSXETG00000016899	noct	81	73.854	ENSMLUG00000009023	NOCT	99	73.854	Myotis_lucifugus
ENSXETG00000016899	noct	80	77.049	ENSNGAG00000010135	Noct	100	77.049	Nannospalax_galili
ENSXETG00000016899	noct	81	75.862	ENSNBRG00000017964	noctb	91	75.862	Neolamprologus_brichardi
ENSXETG00000016899	noct	80	78.082	ENSNLEG00000014018	NOCT	99	78.082	Nomascus_leucogenys
ENSXETG00000016899	noct	80	77.174	ENSMEUG00000009500	NOCT	100	77.174	Notamacropus_eugenii
ENSXETG00000016899	noct	81	77.419	ENSOPRG00000003306	NOCT	87	77.188	Ochotona_princeps
ENSXETG00000016899	noct	82	77.807	ENSODEG00000003057	NOCT	100	68.035	Octodon_degus
ENSXETG00000016899	noct	80	58.575	ENSONIG00000003358	noctb	98	58.575	Oreochromis_niloticus
ENSXETG00000016899	noct	80	73.569	ENSOANG00000013761	NOCT	84	73.370	Ornithorhynchus_anatinus
ENSXETG00000016899	noct	81	77.898	ENSOCUG00000005465	NOCT	88	77.719	Oryctolagus_cuniculus
ENSXETG00000016899	noct	80	58.355	ENSORLG00000002100	noctb	89	58.355	Oryzias_latipes
ENSXETG00000016899	noct	79	58.760	ENSORLG00020013826	noctb	99	58.760	Oryzias_latipes_hni
ENSXETG00000016899	noct	79	58.901	ENSORLG00015013405	noctb	92	58.901	Oryzias_latipes_hsok
ENSXETG00000016899	noct	91	57.845	ENSORLG00015019270	nocta	89	61.538	Oryzias_latipes_hsok
ENSXETG00000016899	noct	79	58.919	ENSOMEG00000021625	noctb	91	58.919	Oryzias_melastigma
ENSXETG00000016899	noct	91	58.741	ENSOMEG00000010743	nocta	99	56.103	Oryzias_melastigma
ENSXETG00000016899	noct	100	68.777	ENSOGAG00000008532	NOCT	100	69.214	Otolemur_garnettii
ENSXETG00000016899	noct	81	76.819	ENSOARG00000014103	NOCT	91	76.819	Ovis_aries
ENSXETG00000016899	noct	81	78.108	ENSPPAG00000042856	NOCT	99	78.082	Pan_paniscus
ENSXETG00000016899	noct	81	78.167	ENSPPRG00000009488	NOCT	100	69.130	Panthera_pardus
ENSXETG00000016899	noct	80	77.989	ENSPTIG00000008672	NOCT	100	77.869	Panthera_tigris_altaica
ENSXETG00000016899	noct	80	78.474	ENSPTRG00000016448	NOCT	99	78.082	Pan_troglodytes
ENSXETG00000016899	noct	96	69.932	ENSPANG00000029213	NOCT	98	69.932	Papio_anubis
ENSXETG00000016899	noct	99	58.515	ENSPKIG00000022066	nocta	100	59.052	Paramormyrops_kingsleyae
ENSXETG00000016899	noct	80	59.128	ENSPKIG00000013368	NOCT	100	59.128	Paramormyrops_kingsleyae
ENSXETG00000016899	noct	100	70.538	ENSPSIG00000010338	NOCT	91	69.787	Pelodiscus_sinensis
ENSXETG00000016899	noct	78	61.983	ENSPMGG00000004558	nocta	86	61.983	Periophthalmus_magnuspinnatus
ENSXETG00000016899	noct	79	59.838	ENSPMGG00000019525	noctb	99	59.838	Periophthalmus_magnuspinnatus
ENSXETG00000016899	noct	80	76.230	ENSPEMG00000016096	Noct	100	76.230	Peromyscus_maniculatus_bairdii
ENSXETG00000016899	noct	79	50.674	ENSPMAG00000002990	nocta	99	50.674	Petromyzon_marinus
ENSXETG00000016899	noct	100	67.660	ENSPCIG00000027121	NOCT	100	68.094	Phascolarctos_cinereus
ENSXETG00000016899	noct	93	56.849	ENSPFOG00000004800	nocta	95	57.534	Poecilia_formosa
ENSXETG00000016899	noct	79	57.702	ENSPFOG00000015717	noctb	99	57.963	Poecilia_formosa
ENSXETG00000016899	noct	79	57.702	ENSPLAG00000016228	noctb	99	57.963	Poecilia_latipinna
ENSXETG00000016899	noct	80	62.766	ENSPLAG00000004749	nocta	100	62.766	Poecilia_latipinna
ENSXETG00000016899	noct	80	62.434	ENSPMEG00000008265	nocta	91	63.325	Poecilia_mexicana
ENSXETG00000016899	noct	79	57.180	ENSPMEG00000019690	noctb	99	57.441	Poecilia_mexicana
ENSXETG00000016899	noct	93	57.666	ENSPREG00000006876	nocta	95	57.500	Poecilia_reticulata
ENSXETG00000016899	noct	79	57.441	ENSPREG00000001623	noctb	99	57.702	Poecilia_reticulata
ENSXETG00000016899	noct	80	78.474	ENSPPYG00000015067	NOCT	86	78.284	Pongo_abelii
ENSXETG00000016899	noct	81	70.430	ENSPCAG00000016793	NOCT	87	70.292	Procavia_capensis
ENSXETG00000016899	noct	100	69.651	ENSPCOG00000013805	NOCT	100	69.651	Propithecus_coquereli
ENSXETG00000016899	noct	81	78.495	ENSPVAG00000017841	NOCT	88	78.249	Pteropus_vampyrus
ENSXETG00000016899	noct	79	59.079	ENSPNYG00000003447	noctb	97	59.079	Pundamilia_nyererei
ENSXETG00000016899	noct	86	58.663	ENSPNAG00000029426	nocta	84	61.600	Pygocentrus_nattereri
ENSXETG00000016899	noct	100	68.122	ENSRNOG00000010799	Noct	88	76.658	Rattus_norvegicus
ENSXETG00000016899	noct	81	77.898	ENSRBIG00000032388	-	87	77.719	Rhinopithecus_bieti
ENSXETG00000016899	noct	83	64.021	ENSRBIG00000040138	-	88	64.286	Rhinopithecus_bieti
ENSXETG00000016899	noct	81	77.898	ENSRROG00000032107	-	87	77.719	Rhinopithecus_roxellana
ENSXETG00000016899	noct	82	71.011	ENSRROG00000043125	-	96	71.011	Rhinopithecus_roxellana
ENSXETG00000016899	noct	84	77.285	ENSSBOG00000022743	NOCT	99	77.454	Saimiri_boliviensis_boliviensis
ENSXETG00000016899	noct	80	77.989	ENSSHAG00000004440	NOCT	94	77.778	Sarcophilus_harrisii
ENSXETG00000016899	noct	99	56.867	ENSSFOG00015019938	noctb	99	64.516	Scleropages_formosus
ENSXETG00000016899	noct	82	67.546	ENSSFOG00015024047	NOCT	93	68.464	Scleropages_formosus
ENSXETG00000016899	noct	80	58.621	ENSSMAG00000012233	noctb	89	58.621	Scophthalmus_maximus
ENSXETG00000016899	noct	83	62.060	ENSSMAG00000015100	nocta	86	62.060	Scophthalmus_maximus
ENSXETG00000016899	noct	83	62.626	ENSSDUG00000000870	nocta	87	62.755	Seriola_dumerili
ENSXETG00000016899	noct	79	60.000	ENSSDUG00000019799	noctb	99	60.054	Seriola_dumerili
ENSXETG00000016899	noct	83	62.374	ENSSLDG00000007584	nocta	87	62.500	Seriola_lalandi_dorsalis
ENSXETG00000016899	noct	80	58.929	ENSSLDG00000008012	noctb	97	58.929	Seriola_lalandi_dorsalis
ENSXETG00000016899	noct	79	57.182	ENSSARG00000008892	NOCT	99	57.182	Sorex_araneus
ENSXETG00000016899	noct	88	74.568	ENSSPUG00000008160	NOCT	94	78.075	Sphenodon_punctatus
ENSXETG00000016899	noct	79	62.162	ENSSPAG00000010999	noctb	99	62.162	Stegastes_partitus
ENSXETG00000016899	noct	82	63.000	ENSSPAG00000023537	nocta	95	59.775	Stegastes_partitus
ENSXETG00000016899	noct	81	77.568	ENSSSCG00000024596	NOCT	99	77.839	Sus_scrofa
ENSXETG00000016899	noct	81	79.404	ENSTGUG00000014883	-	100	79.404	Taeniopygia_guttata
ENSXETG00000016899	noct	81	79.404	ENSTGUG00000002465	-	99	79.404	Taeniopygia_guttata
ENSXETG00000016899	noct	79	58.108	ENSTRUG00000014977	noctb	100	58.108	Takifugu_rubripes
ENSXETG00000016899	noct	86	59.091	ENSTRUG00000004981	nocta	92	61.990	Takifugu_rubripes
ENSXETG00000016899	noct	81	60.363	ENSTNIG00000014249	nocta	99	60.363	Tetraodon_nigroviridis
ENSXETG00000016899	noct	72	62.349	ENSTNIG00000012346	noctb	100	62.349	Tetraodon_nigroviridis
ENSXETG00000016899	noct	60	83.394	ENSTBEG00000009092	NOCT	75	83.394	Tupaia_belangeri
ENSXETG00000016899	noct	52	83.212	ENSTTRG00000013558	NOCT	62	83.212	Tursiops_truncatus
ENSXETG00000016899	noct	80	77.869	ENSUAMG00000011467	NOCT	99	68.791	Ursus_americanus
ENSXETG00000016899	noct	79	77.839	ENSUMAG00000014943	NOCT	98	77.839	Ursus_maritimus
ENSXETG00000016899	noct	82	75.926	ENSVPAG00000003667	NOCT	87	75.926	Vicugna_pacos
ENSXETG00000016899	noct	84	76.240	ENSVVUG00000021461	NOCT	100	78.142	Vulpes_vulpes
ENSXETG00000016899	noct	81	63.852	ENSXCOG00000013730	nocta	87	63.852	Xiphophorus_couchianus
ENSXETG00000016899	noct	79	59.673	ENSXCOG00000012036	noctb	99	59.673	Xiphophorus_couchianus
ENSXETG00000016899	noct	99	57.235	ENSXMAG00000029143	NOCT	99	57.235	Xiphophorus_maculatus
ENSXETG00000016899	noct	79	58.747	ENSXMAG00000017762	noctb	99	58.747	Xiphophorus_maculatus