EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000017153 (Gene tree)
Gene ID: -
Gene Symbol: r3hdm2
Alias: -
Full Name: Xenopus tropicalis R3H domain containing 2 (r3hdm2)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 71984 bases
Position: chrGL173121.1:463496-535479
Accession: NM_001130339
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000063942	R3H	PF01424.22	6.3e-10	1	1
ENSXETP00000037400	R3H	PF01424.22	8.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000063883	-	3565	-	ENSXETP00000063942	981 (aa)	-	F7CFA1
ENSXETT00000037400	-	3580	-	ENSXETP00000037400	1040 (aa)	-	F7CM19

Gene Model

Click here to download ENSXETG00000017153's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000017153's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000017153	r3hdm2	83	53.483	ENSXETG00000019330	r3hdm1	96	49.351

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000017153	r3hdm2	100	73.193	ENSG00000179912	R3HDM2	100	73.896	Homo_sapiens
ENSXETG00000017153	r3hdm2	62	36.446	ENSAPOG00000021873	-	80	40.165	Acanthochromis_polyacanthus
ENSXETG00000017153	r3hdm2	99	61.025	ENSAPOG00000020341	r3hdm2	99	62.160	Acanthochromis_polyacanthus
ENSXETG00000017153	r3hdm2	100	72.727	ENSAMEG00000004812	R3HDM2	100	74.053	Ailuropoda_melanoleuca
ENSXETG00000017153	r3hdm2	93	62.342	ENSACIG00000016146	r3hdm2	98	61.920	Amphilophus_citrinellus
ENSXETG00000017153	r3hdm2	63	37.907	ENSAOCG00000003840	-	94	37.968	Amphiprion_ocellaris
ENSXETG00000017153	r3hdm2	99	60.770	ENSAOCG00000023694	r3hdm2	99	62.212	Amphiprion_ocellaris
ENSXETG00000017153	r3hdm2	63	37.853	ENSAPEG00000014325	-	93	36.552	Amphiprion_percula
ENSXETG00000017153	r3hdm2	99	61.181	ENSAPEG00000008851	r3hdm2	100	63.152	Amphiprion_percula
ENSXETG00000017153	r3hdm2	99	60.330	ENSATEG00000025024	r3hdm2	100	64.607	Anabas_testudineus
ENSXETG00000017153	r3hdm2	99	81.327	ENSAPLG00000004298	R3HDM2	92	78.240	Anas_platyrhynchos
ENSXETG00000017153	r3hdm2	100	71.163	ENSACAG00000006388	R3HDM2	100	72.141	Anolis_carolinensis
ENSXETG00000017153	r3hdm2	98	70.389	ENSANAG00000031310	-	100	71.150	Aotus_nancymaae
ENSXETG00000017153	r3hdm2	100	73.193	ENSANAG00000025397	-	100	73.970	Aotus_nancymaae
ENSXETG00000017153	r3hdm2	99	61.843	ENSACLG00000019106	r3hdm2	99	62.454	Astatotilapia_calliptera
ENSXETG00000017153	r3hdm2	94	57.039	ENSAMXG00000017180	r3hdm2	99	58.689	Astyanax_mexicanus
ENSXETG00000017153	r3hdm2	100	72.892	ENSBTAG00000018361	R3HDM2	100	73.769	Bos_taurus
ENSXETG00000017153	r3hdm2	100	73.394	ENSCJAG00000007365	R3HDM2	100	74.145	Callithrix_jacchus
ENSXETG00000017153	r3hdm2	100	73.000	ENSCAFG00000000215	R3HDM2	100	74.300	Canis_familiaris
ENSXETG00000017153	r3hdm2	92	81.852	ENSCAFG00020023713	R3HDM2	100	74.122	Canis_lupus_dingo
ENSXETG00000017153	r3hdm2	100	73.193	ENSCHIG00000014022	R3HDM2	100	73.970	Capra_hircus
ENSXETG00000017153	r3hdm2	100	72.328	ENSTSYG00000001449	R3HDM2	100	73.180	Carlito_syrichta
ENSXETG00000017153	r3hdm2	100	73.112	ENSCPOG00000009217	R3HDM2	100	73.714	Cavia_porcellus
ENSXETG00000017153	r3hdm2	88	72.955	ENSCCAG00000026083	R3HDM2	100	73.804	Cebus_capucinus
ENSXETG00000017153	r3hdm2	100	73.193	ENSCATG00000036929	R3HDM2	100	73.896	Cercocebus_atys
ENSXETG00000017153	r3hdm2	100	72.159	ENSCLAG00000011997	R3HDM2	100	73.390	Chinchilla_lanigera
ENSXETG00000017153	r3hdm2	100	72.091	ENSCSAG00000004911	R3HDM2	100	72.942	Chlorocebus_sabaeus
ENSXETG00000017153	r3hdm2	76	70.751	ENSCHOG00000005636	R3HDM2	91	71.739	Choloepus_hoffmanni
ENSXETG00000017153	r3hdm2	100	71.191	ENSCPBG00000013922	R3HDM2	100	71.058	Chrysemys_picta_bellii
ENSXETG00000017153	r3hdm2	100	73.193	ENSCANG00000043807	R3HDM2	100	73.944	Colobus_angolensis_palliatus
ENSXETG00000017153	r3hdm2	100	72.144	ENSCGRG00001017324	R3hdm2	100	72.445	Cricetulus_griseus_chok1gshd
ENSXETG00000017153	r3hdm2	100	71.848	ENSCGRG00000003862	R3hdm2	100	72.322	Cricetulus_griseus_crigri
ENSXETG00000017153	r3hdm2	96	61.275	ENSCSEG00000010925	r3hdm2	100	60.795	Cynoglossus_semilaevis
ENSXETG00000017153	r3hdm2	58	35.748	ENSCVAG00000007202	-	89	35.217	Cyprinodon_variegatus
ENSXETG00000017153	r3hdm2	99	59.982	ENSCVAG00000009058	r3hdm2	99	62.050	Cyprinodon_variegatus
ENSXETG00000017153	r3hdm2	93	61.809	ENSDARG00000102610	r3hdm2	99	61.693	Danio_rerio
ENSXETG00000017153	r3hdm2	100	71.846	ENSDNOG00000015033	R3HDM2	100	73.763	Dasypus_novemcinctus
ENSXETG00000017153	r3hdm2	94	71.125	ENSDORG00000011462	R3hdm2	99	71.809	Dipodomys_ordii
ENSXETG00000017153	r3hdm2	100	73.046	ENSEASG00005007091	R3HDM2	100	73.839	Equus_asinus_asinus
ENSXETG00000017153	r3hdm2	100	73.293	ENSECAG00000003157	R3HDM2	100	74.120	Equus_caballus
ENSXETG00000017153	r3hdm2	96	62.701	ENSELUG00000015969	r3hdm2	100	59.821	Esox_lucius
ENSXETG00000017153	r3hdm2	100	73.150	ENSFCAG00000000192	R3HDM2	99	74.081	Felis_catus
ENSXETG00000017153	r3hdm2	88	85.714	ENSFALG00000000255	R3HDM2	99	85.714	Ficedula_albicollis
ENSXETG00000017153	r3hdm2	100	71.645	ENSFDAG00000019385	R3HDM2	100	73.535	Fukomys_damarensis
ENSXETG00000017153	r3hdm2	50	37.545	ENSFHEG00000007936	-	76	38.556	Fundulus_heteroclitus
ENSXETG00000017153	r3hdm2	99	60.155	ENSFHEG00000016484	r3hdm2	99	62.146	Fundulus_heteroclitus
ENSXETG00000017153	r3hdm2	95	61.252	ENSGMOG00000007961	r3hdm2	100	61.057	Gadus_morhua
ENSXETG00000017153	r3hdm2	100	69.388	ENSGALG00000043736	R3HDM2	100	68.329	Gallus_gallus
ENSXETG00000017153	r3hdm2	99	60.405	ENSGAFG00000013887	r3hdm2	100	61.411	Gambusia_affinis
ENSXETG00000017153	r3hdm2	62	36.499	ENSGAFG00000015558	-	76	39.643	Gambusia_affinis
ENSXETG00000017153	r3hdm2	95	61.816	ENSGACG00000006442	r3hdm2	100	64.251	Gasterosteus_aculeatus
ENSXETG00000017153	r3hdm2	100	71.541	ENSGAGG00000017797	R3HDM2	100	71.471	Gopherus_agassizii
ENSXETG00000017153	r3hdm2	100	73.092	ENSGGOG00000015007	R3HDM2	100	73.795	Gorilla_gorilla
ENSXETG00000017153	r3hdm2	89	66.893	ENSHGLG00000010421	-	97	66.780	Heterocephalus_glaber_female
ENSXETG00000017153	r3hdm2	100	72.512	ENSHGLG00000010434	-	100	73.175	Heterocephalus_glaber_female
ENSXETG00000017153	r3hdm2	95	64.774	ENSHGLG00100018871	-	99	64.465	Heterocephalus_glaber_male
ENSXETG00000017153	r3hdm2	100	72.545	ENSHGLG00100004183	-	100	73.175	Heterocephalus_glaber_male
ENSXETG00000017153	r3hdm2	99	59.881	ENSHCOG00000001142	r3hdm2	96	61.569	Hippocampus_comes
ENSXETG00000017153	r3hdm2	99	58.924	ENSIPUG00000023873	r3hdm2	99	60.757	Ictalurus_punctatus
ENSXETG00000017153	r3hdm2	100	69.469	ENSSTOG00000013424	R3HDM2	100	70.370	Ictidomys_tridecemlineatus
ENSXETG00000017153	r3hdm2	100	72.624	ENSJJAG00000010001	R3hdm2	100	73.289	Jaculus_jaculus
ENSXETG00000017153	r3hdm2	95	62.764	ENSKMAG00000012695	r3hdm2	99	64.581	Kryptolebias_marmoratus
ENSXETG00000017153	r3hdm2	96	60.840	ENSLBEG00000013115	r3hdm2	92	62.991	Labrus_bergylta
ENSXETG00000017153	r3hdm2	95	67.066	ENSLACG00000019064	r3hdm2	100	67.100	Latimeria_chalumnae
ENSXETG00000017153	r3hdm2	100	65.392	ENSLOCG00000005976	r3hdm2	100	66.176	Lepisosteus_oculatus
ENSXETG00000017153	r3hdm2	100	73.081	ENSLAFG00000006510	R3HDM2	100	73.460	Loxodonta_africana
ENSXETG00000017153	r3hdm2	100	73.119	ENSMFAG00000036385	R3HDM2	100	73.922	Macaca_fascicularis
ENSXETG00000017153	r3hdm2	100	73.150	ENSMMUG00000021789	R3HDM2	100	74.099	Macaca_mulatta
ENSXETG00000017153	r3hdm2	100	73.146	ENSMNEG00000025314	R3HDM2	100	73.848	Macaca_nemestrina
ENSXETG00000017153	r3hdm2	100	73.293	ENSMLEG00000028915	R3HDM2	100	73.996	Mandrillus_leucophaeus
ENSXETG00000017153	r3hdm2	63	35.876	ENSMAMG00000011755	-	93	35.743	Mastacembelus_armatus
ENSXETG00000017153	r3hdm2	99	59.652	ENSMAMG00000009793	r3hdm2	99	61.602	Mastacembelus_armatus
ENSXETG00000017153	r3hdm2	99	61.843	ENSMZEG00005007319	r3hdm2	99	62.454	Maylandia_zebra
ENSXETG00000017153	r3hdm2	100	73.227	ENSMICG00000012389	R3HDM2	100	74.026	Microcebus_murinus
ENSXETG00000017153	r3hdm2	100	72.745	ENSMOCG00000014425	R3hdm2	100	73.219	Microtus_ochrogaster
ENSXETG00000017153	r3hdm2	95	62.000	ENSMMOG00000007448	r3hdm2	99	62.091	Mola_mola
ENSXETG00000017153	r3hdm2	95	58.811	ENSMALG00000010211	r3hdm2	98	59.216	Monopterus_albus
ENSXETG00000017153	r3hdm2	100	73.373	MGP_CAROLIEiJ_G0015896	R3hdm2	100	73.011	Mus_caroli
ENSXETG00000017153	r3hdm2	100	73.848	ENSMUSG00000025404	R3hdm2	100	73.365	Mus_musculus
ENSXETG00000017153	r3hdm2	100	72.864	MGP_PahariEiJ_G0031189	R3hdm2	100	73.599	Mus_pahari
ENSXETG00000017153	r3hdm2	100	73.700	MGP_SPRETEiJ_G0016722	R3hdm2	100	73.226	Mus_spretus
ENSXETG00000017153	r3hdm2	98	71.167	ENSMPUG00000001818	R3HDM2	97	72.903	Mustela_putorius_furo
ENSXETG00000017153	r3hdm2	100	73.504	ENSMLUG00000004980	R3HDM2	100	73.504	Myotis_lucifugus
ENSXETG00000017153	r3hdm2	100	72.934	ENSNGAG00000018800	R3hdm2	100	73.834	Nannospalax_galili
ENSXETG00000017153	r3hdm2	94	61.611	ENSNBRG00000004483	r3hdm2	99	62.552	Neolamprologus_brichardi
ENSXETG00000017153	r3hdm2	100	73.092	ENSNLEG00000017351	R3HDM2	100	73.869	Nomascus_leucogenys
ENSXETG00000017153	r3hdm2	99	65.366	ENSMEUG00000008588	R3HDM2	100	65.271	Notamacropus_eugenii
ENSXETG00000017153	r3hdm2	100	66.733	ENSOPRG00000013670	R3HDM2	100	66.433	Ochotona_princeps
ENSXETG00000017153	r3hdm2	99	62.413	ENSONIG00000005075	r3hdm2	99	63.798	Oreochromis_niloticus
ENSXETG00000017153	r3hdm2	64	35.965	ENSONIG00000002315	-	75	39.356	Oreochromis_niloticus
ENSXETG00000017153	r3hdm2	100	73.371	ENSOCUG00000013258	R3HDM2	100	73.749	Oryctolagus_cuniculus
ENSXETG00000017153	r3hdm2	99	60.019	ENSORLG00000005502	r3hdm2	99	61.852	Oryzias_latipes
ENSXETG00000017153	r3hdm2	99	59.447	ENSORLG00020017069	r3hdm2	99	61.759	Oryzias_latipes_hni
ENSXETG00000017153	r3hdm2	99	59.539	ENSORLG00015012735	r3hdm2	99	61.852	Oryzias_latipes_hsok
ENSXETG00000017153	r3hdm2	94	58.065	ENSOMEG00000018079	r3hdm2	93	60.042	Oryzias_melastigma
ENSXETG00000017153	r3hdm2	96	65.068	ENSOGAG00000027966	-	99	65.272	Otolemur_garnettii
ENSXETG00000017153	r3hdm2	100	70.237	ENSOGAG00000012055	R3HDM2	100	71.185	Otolemur_garnettii
ENSXETG00000017153	r3hdm2	100	72.973	ENSOARG00000006929	R3HDM2	100	73.821	Ovis_aries
ENSXETG00000017153	r3hdm2	100	73.193	ENSPPAG00000034395	R3HDM2	100	73.896	Pan_paniscus
ENSXETG00000017153	r3hdm2	100	73.220	ENSPPRG00000009240	R3HDM2	100	74.524	Panthera_pardus
ENSXETG00000017153	r3hdm2	100	73.220	ENSPTIG00000008752	R3HDM2	100	74.524	Panthera_tigris_altaica
ENSXETG00000017153	r3hdm2	100	73.019	ENSPTRG00000046457	R3HDM2	100	73.821	Pan_troglodytes
ENSXETG00000017153	r3hdm2	98	72.587	ENSPANG00000024002	R3HDM2	99	73.306	Papio_anubis
ENSXETG00000017153	r3hdm2	96	62.317	ENSPKIG00000003171	r3hdm2	99	61.423	Paramormyrops_kingsleyae
ENSXETG00000017153	r3hdm2	63	62.558	ENSPSIG00000006954	R3HDM2	100	64.353	Pelodiscus_sinensis
ENSXETG00000017153	r3hdm2	93	65.595	ENSPMGG00000007061	r3hdm2	99	65.916	Periophthalmus_magnuspinnatus
ENSXETG00000017153	r3hdm2	100	73.367	ENSPEMG00000015964	R3hdm2	100	73.359	Peromyscus_maniculatus_bairdii
ENSXETG00000017153	r3hdm2	100	73.467	ENSPCIG00000023841	R3HDM2	100	73.367	Phascolarctos_cinereus
ENSXETG00000017153	r3hdm2	94	76.012	ENSPFOG00000006077	r3hdm2	99	56.468	Poecilia_formosa
ENSXETG00000017153	r3hdm2	50	40.215	ENSPFOG00000008096	-	76	40.107	Poecilia_formosa
ENSXETG00000017153	r3hdm2	99	61.014	ENSPLAG00000002971	r3hdm2	99	62.281	Poecilia_latipinna
ENSXETG00000017153	r3hdm2	50	40.215	ENSPLAG00000006973	-	76	39.929	Poecilia_latipinna
ENSXETG00000017153	r3hdm2	50	40.575	ENSPMEG00000014457	-	76	40.107	Poecilia_mexicana
ENSXETG00000017153	r3hdm2	99	61.014	ENSPMEG00000005330	r3hdm2	99	62.281	Poecilia_mexicana
ENSXETG00000017153	r3hdm2	99	60.819	ENSPREG00000008424	r3hdm2	99	62.086	Poecilia_reticulata
ENSXETG00000017153	r3hdm2	97	67.554	ENSPPYG00000004685	R3HDM2	81	68.373	Pongo_abelii
ENSXETG00000017153	r3hdm2	88	84.838	ENSPCAG00000014642	R3HDM2	94	82.609	Procavia_capensis
ENSXETG00000017153	r3hdm2	100	73.621	ENSPCOG00000013201	R3HDM2	100	74.524	Propithecus_coquereli
ENSXETG00000017153	r3hdm2	100	73.644	ENSPVAG00000003967	R3HDM2	100	74.310	Pteropus_vampyrus
ENSXETG00000017153	r3hdm2	94	61.290	ENSPNYG00000013479	r3hdm2	100	62.500	Pundamilia_nyererei
ENSXETG00000017153	r3hdm2	99	61.255	ENSPNAG00000017473	r3hdm2	99	62.269	Pygocentrus_nattereri
ENSXETG00000017153	r3hdm2	100	72.573	ENSRNOG00000007801	R3hdm2	100	72.633	Rattus_norvegicus
ENSXETG00000017153	r3hdm2	100	71.386	ENSRBIG00000037403	R3HDM2	100	72.161	Rhinopithecus_bieti
ENSXETG00000017153	r3hdm2	100	73.219	ENSRROG00000022271	R3HDM2	100	73.970	Rhinopithecus_roxellana
ENSXETG00000017153	r3hdm2	100	73.293	ENSSBOG00000023547	R3HDM2	100	74.044	Saimiri_boliviensis_boliviensis
ENSXETG00000017153	r3hdm2	100	71.307	ENSSHAG00000003511	R3HDM2	99	74.744	Sarcophilus_harrisii
ENSXETG00000017153	r3hdm2	94	63.694	ENSSFOG00015011219	r3hdm2	99	64.076	Scleropages_formosus
ENSXETG00000017153	r3hdm2	99	61.028	ENSSMAG00000012073	r3hdm2	100	61.765	Scophthalmus_maximus
ENSXETG00000017153	r3hdm2	99	60.933	ENSSDUG00000019269	r3hdm2	100	61.860	Seriola_dumerili
ENSXETG00000017153	r3hdm2	61	35.894	ENSSDUG00000009188	-	94	36.401	Seriola_dumerili
ENSXETG00000017153	r3hdm2	99	60.741	ENSSLDG00000005252	r3hdm2	100	61.675	Seriola_lalandi_dorsalis
ENSXETG00000017153	r3hdm2	93	66.788	ENSSARG00000003958	R3HDM2	94	68.007	Sorex_araneus
ENSXETG00000017153	r3hdm2	100	70.302	ENSSPUG00000014132	R3HDM2	100	70.010	Sphenodon_punctatus
ENSXETG00000017153	r3hdm2	62	36.496	ENSSPAG00000016856	-	94	37.950	Stegastes_partitus
ENSXETG00000017153	r3hdm2	99	60.815	ENSSPAG00000022594	r3hdm2	100	62.593	Stegastes_partitus
ENSXETG00000017153	r3hdm2	100	73.193	ENSSSCG00000026498	R3HDM2	100	74.044	Sus_scrofa
ENSXETG00000017153	r3hdm2	73	68.952	ENSTGUG00000015881	R3HDM2	100	69.082	Taeniopygia_guttata
ENSXETG00000017153	r3hdm2	95	59.979	ENSTRUG00000015075	r3hdm2	99	61.267	Takifugu_rubripes
ENSXETG00000017153	r3hdm2	92	71.625	ENSTNIG00000007057	r3hdm2	89	76.602	Tetraodon_nigroviridis
ENSXETG00000017153	r3hdm2	81	75.000	ENSTBEG00000015967	R3HDM2	81	76.056	Tupaia_belangeri
ENSXETG00000017153	r3hdm2	93	73.318	ENSTTRG00000013082	R3HDM2	95	77.401	Tursiops_truncatus
ENSXETG00000017153	r3hdm2	100	72.919	ENSUAMG00000020913	R3HDM2	100	73.245	Ursus_americanus
ENSXETG00000017153	r3hdm2	100	69.169	ENSUMAG00000019179	R3HDM2	100	70.370	Ursus_maritimus
ENSXETG00000017153	r3hdm2	95	78.693	ENSVPAG00000008656	R3HDM2	95	78.693	Vicugna_pacos
ENSXETG00000017153	r3hdm2	99	72.100	ENSVVUG00000018014	R3HDM2	97	73.538	Vulpes_vulpes
ENSXETG00000017153	r3hdm2	87	59.040	ENSXCOG00000013882	r3hdm2	100	60.874	Xiphophorus_couchianus
ENSXETG00000017153	r3hdm2	50	39.818	ENSXMAG00000002994	-	76	39.464	Xiphophorus_maculatus
ENSXETG00000017153	r3hdm2	99	60.074	ENSXMAG00000017978	r3hdm2	99	62.142	Xiphophorus_maculatus