EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000017500 (Gene tree)
Gene ID: -
Gene Symbol: pcmt1
Alias: -
Full Name: Xenopus tropicalis protein-L-isoaspartate (D-aspartate) O-methyltransferase (pcmt1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 74201 bases
Position: chrGL173379.1:362371-436571
Accession: NM_001030445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000054856	GCD14	PF08704.10	4.8e-05	1	1
ENSXETP00000038016	GCD14	PF08704.10	9.8e-05	1	1
ENSXETP00000054856	Methyltransf_31	PF13847.6	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000054856	-	1596	-	ENSXETP00000054856	182 (aa)	-	F6QIA3
ENSXETT00000038016	-	798	-	ENSXETP00000038016	265 (aa)	-	F7BWE4

Gene Model

Click here to download ENSXETG00000017500's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000017500's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000017500	pcmt1	98	74.302	ENSXETG00000015985	-	90	70.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000017500	pcmt1	100	89.011	ENSAPOG00000013007	pcmt	96	83.077	Acanthochromis_polyacanthus
ENSXETG00000017500	pcmt1	97	73.864	ENSACIG00000024027	pcmtl	99	69.058	Amphilophus_citrinellus
ENSXETG00000017500	pcmt1	98	90.503	ENSACIG00000023767	pcmt	96	84.556	Amphilophus_citrinellus
ENSXETG00000017500	pcmt1	100	89.011	ENSAOCG00000002467	pcmt	96	83.077	Amphiprion_ocellaris
ENSXETG00000017500	pcmt1	98	88.827	ENSAPEG00000005991	pcmt	96	83.398	Amphiprion_percula
ENSXETG00000017500	pcmt1	100	89.560	ENSATEG00000020772	pcmt	99	88.053	Anabas_testudineus
ENSXETG00000017500	pcmt1	100	75.543	ENSAPLG00000004765	-	99	74.009	Anas_platyrhynchos
ENSXETG00000017500	pcmt1	98	96.089	ENSAPLG00000009762	PCMT1	99	88.889	Anas_platyrhynchos
ENSXETG00000017500	pcmt1	99	79.006	ENSACAG00000013901	-	98	76.444	Anolis_carolinensis
ENSXETG00000017500	pcmt1	98	93.296	ENSACAG00000006734	PCMT1	100	92.070	Anolis_carolinensis
ENSXETG00000017500	pcmt1	100	90.110	ENSACLG00000027300	pcmt	100	83.700	Astatotilapia_calliptera
ENSXETG00000017500	pcmt1	99	71.271	ENSAMXG00000033948	pcmtl	92	68.421	Astyanax_mexicanus
ENSXETG00000017500	pcmt1	98	88.827	ENSAMXG00000036038	pcmt	99	82.301	Astyanax_mexicanus
ENSXETG00000017500	pcmt1	98	92.179	ENSBTAG00000010204	PCMT1	91	86.873	Bos_taurus
ENSXETG00000017500	pcmt1	98	54.749	WBGene00003954	pcm-1	99	52.444	Caenorhabditis_elegans
ENSXETG00000017500	pcmt1	99	92.818	ENSCHIG00000025710	PCMT1	100	88.018	Capra_hircus
ENSXETG00000017500	pcmt1	99	76.796	ENSCHOG00000009436	PCMT1	99	79.111	Choloepus_hoffmanni
ENSXETG00000017500	pcmt1	100	77.473	ENSCPBG00000013417	-	92	73.043	Chrysemys_picta_bellii
ENSXETG00000017500	pcmt1	98	95.531	ENSCPBG00000016587	PCMT1	91	90.000	Chrysemys_picta_bellii
ENSXETG00000017500	pcmt1	100	89.011	ENSCSEG00000003382	pcmt	94	83.462	Cynoglossus_semilaevis
ENSXETG00000017500	pcmt1	100	90.110	ENSCVAG00000021517	pcmt	96	84.231	Cyprinodon_variegatus
ENSXETG00000017500	pcmt1	99	72.928	ENSCVAG00000010875	pcmtl	92	67.982	Cyprinodon_variegatus
ENSXETG00000017500	pcmt1	99	73.481	ENSDARG00000042848	pcmtl	92	67.982	Danio_rerio
ENSXETG00000017500	pcmt1	100	88.462	ENSDARG00000015201	pcmt	99	87.225	Danio_rerio
ENSXETG00000017500	pcmt1	98	93.296	ENSDORG00000003137	Pcmt1	100	92.347	Dipodomys_ordii
ENSXETG00000017500	pcmt1	98	79.888	ENSEBUG00000000561	PCMT1	100	77.551	Eptatretus_burgeri
ENSXETG00000017500	pcmt1	100	93.956	ENSEASG00005008914	-	92	86.742	Equus_asinus_asinus
ENSXETG00000017500	pcmt1	100	93.407	ENSECAG00000005292	PCMT1	92	86.038	Equus_caballus
ENSXETG00000017500	pcmt1	100	93.407	ENSEEUG00000015095	PCMT1	100	91.228	Erinaceus_europaeus
ENSXETG00000017500	pcmt1	99	72.928	ENSELUG00000016823	pcmtl	92	68.421	Esox_lucius
ENSXETG00000017500	pcmt1	100	91.209	ENSELUG00000019001	pcmt	97	84.615	Esox_lucius
ENSXETG00000017500	pcmt1	98	96.089	ENSFALG00000012172	PCMT1	100	94.388	Ficedula_albicollis
ENSXETG00000017500	pcmt1	100	77.473	ENSFALG00000001118	-	98	71.255	Ficedula_albicollis
ENSXETG00000017500	pcmt1	100	89.560	ENSFHEG00000016480	pcmt	96	84.884	Fundulus_heteroclitus
ENSXETG00000017500	pcmt1	100	87.363	ENSGMOG00000017692	pcmt	100	85.965	Gadus_morhua
ENSXETG00000017500	pcmt1	100	96.154	ENSGALG00000012388	PCMT1	100	93.833	Gallus_gallus
ENSXETG00000017500	pcmt1	100	80.220	ENSGALG00000032988	PCMT1L	92	77.778	Gallus_gallus
ENSXETG00000017500	pcmt1	100	90.110	ENSGAFG00000004794	pcmt	96	84.231	Gambusia_affinis
ENSXETG00000017500	pcmt1	99	71.271	ENSGAFG00000003376	pcmtl	97	66.228	Gambusia_affinis
ENSXETG00000017500	pcmt1	100	78.571	ENSGAGG00000013101	-	92	74.348	Gopherus_agassizii
ENSXETG00000017500	pcmt1	98	96.089	ENSGAGG00000020154	PCMT1	100	93.392	Gopherus_agassizii
ENSXETG00000017500	pcmt1	100	90.110	ENSHBUG00000010762	pcmt	100	83.700	Haplochromis_burtoni
ENSXETG00000017500	pcmt1	98	86.034	ENSHCOG00000010431	pcmt	96	81.783	Hippocampus_comes
ENSXETG00000017500	pcmt1	98	92.179	ENSIPUG00000009756	pcmt1	96	85.098	Ictalurus_punctatus
ENSXETG00000017500	pcmt1	99	72.376	ENSIPUG00000020977	pimt	92	68.421	Ictalurus_punctatus
ENSXETG00000017500	pcmt1	98	91.620	ENSJJAG00000023560	Pcmt1	99	90.708	Jaculus_jaculus
ENSXETG00000017500	pcmt1	100	90.659	ENSKMAG00000022208	pcmt	96	85.000	Kryptolebias_marmoratus
ENSXETG00000017500	pcmt1	99	71.271	ENSKMAG00000006639	pcmtl	92	67.105	Kryptolebias_marmoratus
ENSXETG00000017500	pcmt1	100	88.462	ENSLBEG00000017170	pcmt	96	82.692	Labrus_bergylta
ENSXETG00000017500	pcmt1	98	89.944	ENSLACG00000006397	PCMT1	96	85.388	Latimeria_chalumnae
ENSXETG00000017500	pcmt1	100	89.560	ENSLOCG00000017009	pcmt	98	86.809	Lepisosteus_oculatus
ENSXETG00000017500	pcmt1	98	93.296	ENSLAFG00000012417	PCMT1	100	91.630	Loxodonta_africana
ENSXETG00000017500	pcmt1	100	90.110	ENSMAMG00000000917	pcmt	96	83.462	Mastacembelus_armatus
ENSXETG00000017500	pcmt1	98	89.944	ENSMZEG00005004971	pcmt	100	83.700	Maylandia_zebra
ENSXETG00000017500	pcmt1	100	95.604	ENSMGAG00000012636	PCMT1	100	92.857	Meleagris_gallopavo
ENSXETG00000017500	pcmt1	98	80.447	ENSMGAG00000003062	-	100	77.533	Meleagris_gallopavo
ENSXETG00000017500	pcmt1	100	88.462	ENSMMOG00000015402	pcmt	98	78.462	Mola_mola
ENSXETG00000017500	pcmt1	97	72.727	ENSMMOG00000012018	pcmtl	93	69.058	Mola_mola
ENSXETG00000017500	pcmt1	100	90.110	ENSMALG00000020956	pcmt	100	87.281	Monopterus_albus
ENSXETG00000017500	pcmt1	98	89.944	ENSNBRG00000003034	pcmt	100	87.225	Neolamprologus_brichardi
ENSXETG00000017500	pcmt1	100	90.110	ENSONIG00000005572	pcmt	96	83.846	Oreochromis_niloticus
ENSXETG00000017500	pcmt1	98	94.413	ENSOANG00000001066	PCMT1	92	87.891	Ornithorhynchus_anatinus
ENSXETG00000017500	pcmt1	100	89.560	ENSORLG00000017625	pcmt	97	83.077	Oryzias_latipes
ENSXETG00000017500	pcmt1	98	89.385	ENSORLG00020018295	pcmt	98	82.510	Oryzias_latipes_hni
ENSXETG00000017500	pcmt1	98	89.385	ENSORLG00015016675	pcmt	98	82.510	Oryzias_latipes_hsok
ENSXETG00000017500	pcmt1	100	90.659	ENSOMEG00000021999	pcmt	96	84.231	Oryzias_melastigma
ENSXETG00000017500	pcmt1	100	92.857	ENSOARG00000002890	PCMT1	100	89.623	Ovis_aries
ENSXETG00000017500	pcmt1	99	72.928	ENSPKIG00000022992	pcmtl	99	66.802	Paramormyrops_kingsleyae
ENSXETG00000017500	pcmt1	100	78.022	ENSPSIG00000012438	-	95	73.478	Pelodiscus_sinensis
ENSXETG00000017500	pcmt1	98	94.972	ENSPSIG00000017327	PCMT1	100	93.878	Pelodiscus_sinensis
ENSXETG00000017500	pcmt1	100	76.374	ENSPMGG00000013455	pcmt	97	73.846	Periophthalmus_magnuspinnatus
ENSXETG00000017500	pcmt1	100	89.560	ENSPFOG00000015367	pcmt	96	83.462	Poecilia_formosa
ENSXETG00000017500	pcmt1	100	89.560	ENSPLAG00000004032	pcmt	99	84.513	Poecilia_latipinna
ENSXETG00000017500	pcmt1	100	89.011	ENSPMEG00000010356	pcmt	96	83.462	Poecilia_mexicana
ENSXETG00000017500	pcmt1	98	84.916	ENSPREG00000015965	pcmt	99	84.513	Poecilia_reticulata
ENSXETG00000017500	pcmt1	97	71.591	ENSPREG00000016451	pcmtl	93	66.667	Poecilia_reticulata
ENSXETG00000017500	pcmt1	90	76.829	ENSPCAG00000003359	PCMT1	99	61.778	Procavia_capensis
ENSXETG00000017500	pcmt1	98	89.944	ENSPNYG00000000882	pcmt	100	83.700	Pundamilia_nyererei
ENSXETG00000017500	pcmt1	99	72.376	ENSPNAG00000005412	pcmtl	92	68.421	Pygocentrus_nattereri
ENSXETG00000017500	pcmt1	100	89.011	ENSPNAG00000002676	pcmt	97	81.538	Pygocentrus_nattereri
ENSXETG00000017500	pcmt1	88	91.925	ENSSHAG00000017541	PCMT1	100	91.411	Sarcophilus_harrisii
ENSXETG00000017500	pcmt1	100	88.462	ENSSFOG00015020607	pcmt1	99	86.784	Scleropages_formosus
ENSXETG00000017500	pcmt1	100	88.462	ENSSMAG00000003401	pcmt	96	83.462	Scophthalmus_maximus
ENSXETG00000017500	pcmt1	100	89.560	ENSSDUG00000007397	pcmt	96	83.462	Seriola_dumerili
ENSXETG00000017500	pcmt1	88	71.875	ENSSLDG00000011313	-	98	71.166	Seriola_lalandi_dorsalis
ENSXETG00000017500	pcmt1	100	89.560	ENSSLDG00000020446	pcmt	96	83.462	Seriola_lalandi_dorsalis
ENSXETG00000017500	pcmt1	98	93.855	ENSSPUG00000005816	PCMT1	100	92.511	Sphenodon_punctatus
ENSXETG00000017500	pcmt1	98	89.944	ENSSPAG00000016434	pcmt	96	84.496	Stegastes_partitus
ENSXETG00000017500	pcmt1	98	93.296	ENSSSCG00000004103	PCMT1	92	86.364	Sus_scrofa
ENSXETG00000017500	pcmt1	51	80.645	ENSTGUG00000016966	-	100	79.208	Taeniopygia_guttata
ENSXETG00000017500	pcmt1	98	77.654	ENSTGUG00000007336	-	100	75.556	Taeniopygia_guttata
ENSXETG00000017500	pcmt1	98	96.089	ENSTGUG00000011332	PCMT1	100	94.845	Taeniopygia_guttata
ENSXETG00000017500	pcmt1	99	69.613	ENSTRUG00000025102	pcmtl	92	65.789	Takifugu_rubripes
ENSXETG00000017500	pcmt1	100	86.413	ENSTNIG00000019127	pcmt	100	84.348	Tetraodon_nigroviridis
ENSXETG00000017500	pcmt1	98	84.916	ENSXCOG00000018495	pcmt	99	84.956	Xiphophorus_couchianus
ENSXETG00000017500	pcmt1	97	71.591	ENSXCOG00000007525	pcmtl	93	66.228	Xiphophorus_couchianus
ENSXETG00000017500	pcmt1	99	71.271	ENSXMAG00000013327	pcmtl	92	66.228	Xiphophorus_maculatus
ENSXETG00000017500	pcmt1	98	89.385	ENSXMAG00000006249	pcmt	96	84.496	Xiphophorus_maculatus