EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000017566 (Gene tree)
Gene ID: -
Gene Symbol: smarca5
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 17682 bases
Position: chrGL173194.1:185104-202785
Accession: XB-GENE-494817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000038157	ResIII	PF04851.15	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000038157	-	2994	-	ENSXETP00000038157	997 (aa)	-	F6Y042

Gene Model

Click here to download ENSXETG00000017566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000017566's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000017566	smarca5	93	87.996	ENSXETG00000001526	smarca1	93	87.996
ENSXETG00000017566	smarca5	54	41.549	ENSXETG00000017194	CHD8	60	41.549
ENSXETG00000017566	smarca5	52	40.993	ENSXETG00000026410	chd4	60	41.045

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000017566	smarca5	94	93.610	ENSG00000153147	SMARCA5	95	88.767	Homo_sapiens
ENSXETG00000017566	smarca5	95	93.242	ENSAMEG00000009585	SMARCA5	95	89.100	Ailuropoda_melanoleuca
ENSXETG00000017566	smarca5	93	93.737	ENSAPLG00000009206	SMARCA5	97	93.737	Anas_platyrhynchos
ENSXETG00000017566	smarca5	94	93.823	ENSACAG00000003038	SMARCA5	92	92.589	Anolis_carolinensis
ENSXETG00000017566	smarca5	95	93.122	ENSANAG00000019345	SMARCA5	94	93.610	Aotus_nancymaae
ENSXETG00000017566	smarca5	97	91.615	ENSBTAG00000003399	SMARCA5	92	91.615	Bos_taurus
ENSXETG00000017566	smarca5	95	93.228	ENSCJAG00000002735	SMARCA5	95	88.867	Callithrix_jacchus
ENSXETG00000017566	smarca5	95	93.242	ENSCAFG00000007525	SMARCA5	94	89.606	Canis_familiaris
ENSXETG00000017566	smarca5	95	93.242	ENSCAFG00020025641	SMARCA5	95	89.458	Canis_lupus_dingo
ENSXETG00000017566	smarca5	97	89.855	ENSCHIG00000016375	-	93	89.855	Capra_hircus
ENSXETG00000017566	smarca5	97	91.511	ENSCHIG00000013730	-	95	88.756	Capra_hircus
ENSXETG00000017566	smarca5	95	93.333	ENSTSYG00000009954	SMARCA5	94	93.717	Carlito_syrichta
ENSXETG00000017566	smarca5	92	94.009	ENSCAPG00000013747	SMARCA5	90	94.009	Cavia_aperea
ENSXETG00000017566	smarca5	94	93.610	ENSCPOG00000002259	SMARCA5	90	93.031	Cavia_porcellus
ENSXETG00000017566	smarca5	95	93.228	ENSCCAG00000027215	SMARCA5	94	93.717	Cebus_capucinus
ENSXETG00000017566	smarca5	95	93.122	ENSCATG00000044917	SMARCA5	95	88.767	Cercocebus_atys
ENSXETG00000017566	smarca5	95	92.835	ENSCLAG00000006153	SMARCA5	94	93.717	Chinchilla_lanigera
ENSXETG00000017566	smarca5	92	94.438	ENSCSAG00000003448	SMARCA5	94	94.438	Chlorocebus_sabaeus
ENSXETG00000017566	smarca5	83	93.591	ENSCHOG00000011724	SMARCA5	78	93.591	Choloepus_hoffmanni
ENSXETG00000017566	smarca5	94	94.143	ENSCPBG00000027535	SMARCA5	95	89.900	Chrysemys_picta_bellii
ENSXETG00000017566	smarca5	94	93.610	ENSCANG00000041629	SMARCA5	95	88.668	Colobus_angolensis_palliatus
ENSXETG00000017566	smarca5	95	93.136	ENSCGRG00001012719	Smarca5	95	88.878	Cricetulus_griseus_chok1gshd
ENSXETG00000017566	smarca5	94	93.823	ENSCGRG00000001417	Smarca5	93	93.823	Cricetulus_griseus_crigri
ENSXETG00000017566	smarca5	96	90.471	ENSDNOG00000009158	SMARCA5	90	90.471	Dasypus_novemcinctus
ENSXETG00000017566	smarca5	92	86.587	ENSDORG00000003466	Smarca5	93	86.587	Dipodomys_ordii
ENSXETG00000017566	smarca5	95	83.157	ENSEBUG00000014773	SMARCA5	94	83.209	Eptatretus_burgeri
ENSXETG00000017566	smarca5	95	93.242	ENSEASG00005001866	SMARCA5	94	94.962	Equus_asinus_asinus
ENSXETG00000017566	smarca5	95	93.242	ENSECAG00000002676	SMARCA5	95	88.966	Equus_caballus
ENSXETG00000017566	smarca5	94	89.670	ENSEEUG00000013176	SMARCA5	94	89.670	Erinaceus_europaeus
ENSXETG00000017566	smarca5	92	88.974	ENSELUG00000014653	SMARCA5	93	88.974	Esox_lucius
ENSXETG00000017566	smarca5	95	93.242	ENSFCAG00000004544	SMARCA5	95	89.100	Felis_catus
ENSXETG00000017566	smarca5	92	95.093	ENSFALG00000004987	SMARCA5	94	95.093	Ficedula_albicollis
ENSXETG00000017566	smarca5	94	93.717	ENSFDAG00000021016	SMARCA5	94	93.717	Fukomys_damarensis
ENSXETG00000017566	smarca5	99	83.551	ENSGMOG00000007519	SMARCA5	94	83.551	Gadus_morhua
ENSXETG00000017566	smarca5	94	94.462	ENSGALG00000009913	SMARCA5	93	92.363	Gallus_gallus
ENSXETG00000017566	smarca5	95	87.526	ENSGACG00000017238	SMARCA5	94	84.152	Gasterosteus_aculeatus
ENSXETG00000017566	smarca5	97	91.967	ENSGAGG00000019882	SMARCA5	93	91.967	Gopherus_agassizii
ENSXETG00000017566	smarca5	94	93.610	ENSGGOG00000012595	SMARCA5	94	93.610	Gorilla_gorilla
ENSXETG00000017566	smarca5	95	83.949	ENSHGLG00000000317	-	90	83.949	Heterocephalus_glaber_female
ENSXETG00000017566	smarca5	95	93.031	ENSHGLG00000000816	-	95	89.033	Heterocephalus_glaber_female
ENSXETG00000017566	smarca5	94	93.610	ENSHGLG00100018421	-	94	93.610	Heterocephalus_glaber_male
ENSXETG00000017566	smarca5	95	93.347	ENSSTOG00000010683	SMARCA5	95	89.311	Ictidomys_tridecemlineatus
ENSXETG00000017566	smarca5	95	92.819	ENSJJAG00000014965	Smarca5	90	92.819	Jaculus_jaculus
ENSXETG00000017566	smarca5	94	94.004	ENSLACG00000007091	SMARCA5	92	94.004	Latimeria_chalumnae
ENSXETG00000017566	smarca5	94	91.533	ENSLOCG00000008966	SMARCA5	95	88.706	Lepisosteus_oculatus
ENSXETG00000017566	smarca5	95	93.333	ENSLAFG00000007795	SMARCA5	95	88.756	Loxodonta_africana
ENSXETG00000017566	smarca5	95	93.122	ENSMFAG00000043649	SMARCA5	95	88.767	Macaca_fascicularis
ENSXETG00000017566	smarca5	95	93.122	ENSMMUG00000000829	SMARCA5	94	94.444	Macaca_mulatta
ENSXETG00000017566	smarca5	95	93.122	ENSMNEG00000031916	SMARCA5	95	88.767	Macaca_nemestrina
ENSXETG00000017566	smarca5	95	93.122	ENSMLEG00000042393	SMARCA5	95	88.767	Mandrillus_leucophaeus
ENSXETG00000017566	smarca5	96	93.403	ENSMGAG00000003517	SMARCA5	95	93.403	Meleagris_gallopavo
ENSXETG00000017566	smarca5	94	93.823	ENSMAUG00000015902	Smarca5	92	93.823	Mesocricetus_auratus
ENSXETG00000017566	smarca5	95	93.136	ENSMICG00000003971	SMARCA5	94	92.169	Microcebus_murinus
ENSXETG00000017566	smarca5	95	93.136	ENSMOCG00000016986	-	93	90.172	Microtus_ochrogaster
ENSXETG00000017566	smarca5	99	90.385	ENSMODG00000000391	SMARCA5	90	93.361	Monodelphis_domestica
ENSXETG00000017566	smarca5	95	93.031	ENSMUSG00000031715	Smarca5	95	89.089	Mus_musculus
ENSXETG00000017566	smarca5	95	93.242	MGP_PahariEiJ_G0022862	Smarca5	95	89.289	Mus_pahari
ENSXETG00000017566	smarca5	95	93.347	ENSMLUG00000000468	SMARCA5	94	89.839	Myotis_lucifugus
ENSXETG00000017566	smarca5	97	91.718	ENSNGAG00000000441	Smarca5	95	89.289	Nannospalax_galili
ENSXETG00000017566	smarca5	95	93.122	ENSNLEG00000005383	SMARCA5	95	88.767	Nomascus_leucogenys
ENSXETG00000017566	smarca5	92	90.591	ENSMEUG00000001267	SMARCA5	94	90.591	Notamacropus_eugenii
ENSXETG00000017566	smarca5	86	97.468	ENSOPRG00000014427	SMARCA5	83	97.468	Ochotona_princeps
ENSXETG00000017566	smarca5	92	94.984	ENSOANG00000013921	SMARCA5	94	94.984	Ornithorhynchus_anatinus
ENSXETG00000017566	smarca5	92	94.656	ENSOCUG00000013042	SMARCA5	94	94.656	Oryctolagus_cuniculus
ENSXETG00000017566	smarca5	95	93.136	ENSOGAG00000009702	SMARCA5	90	93.136	Otolemur_garnettii
ENSXETG00000017566	smarca5	97	92.004	ENSOARG00000010589	SMARCA5	91	92.004	Ovis_aries
ENSXETG00000017566	smarca5	94	93.610	ENSPPAG00000028523	SMARCA5	94	93.610	Pan_paniscus
ENSXETG00000017566	smarca5	95	87.751	ENSPPRG00000004925	SMARCA5	95	84.700	Panthera_pardus
ENSXETG00000017566	smarca5	95	93.242	ENSPTIG00000020959	SMARCA5	91	93.242	Panthera_tigris_altaica
ENSXETG00000017566	smarca5	94	93.610	ENSPTRG00000016472	SMARCA5	94	93.610	Pan_troglodytes
ENSXETG00000017566	smarca5	95	93.122	ENSPANG00000001175	SMARCA5	95	88.767	Papio_anubis
ENSXETG00000017566	smarca5	93	89.719	ENSPKIG00000015699	SMARCA5	92	88.917	Paramormyrops_kingsleyae
ENSXETG00000017566	smarca5	93	89.502	ENSPKIG00000015885	SMARCA5	94	89.749	Paramormyrops_kingsleyae
ENSXETG00000017566	smarca5	95	91.640	ENSPSIG00000004177	SMARCA5	94	91.640	Pelodiscus_sinensis
ENSXETG00000017566	smarca5	92	88.804	ENSPMGG00000012316	SMARCA5	94	88.804	Periophthalmus_magnuspinnatus
ENSXETG00000017566	smarca5	94	93.823	ENSPEMG00000008060	Smarca5	92	93.823	Peromyscus_maniculatus_bairdii
ENSXETG00000017566	smarca5	64	85.446	ENSPMAG00000008026	SMARCA5	99	85.446	Petromyzon_marinus
ENSXETG00000017566	smarca5	93	69.807	ENSPMAG00000006011	SMARCA5	91	69.807	Petromyzon_marinus
ENSXETG00000017566	smarca5	95	93.644	ENSPCIG00000003926	SMARCA5	98	89.738	Phascolarctos_cinereus
ENSXETG00000017566	smarca5	95	93.122	ENSPPYG00000015091	SMARCA5	95	88.767	Pongo_abelii
ENSXETG00000017566	smarca5	84	89.055	ENSPCAG00000014230	SMARCA5	84	89.055	Procavia_capensis
ENSXETG00000017566	smarca5	95	90.285	ENSPCOG00000026744	SMARCA5	94	90.628	Propithecus_coquereli
ENSXETG00000017566	smarca5	95	93.136	ENSPVAG00000006482	SMARCA5	90	93.136	Pteropus_vampyrus
ENSXETG00000017566	smarca5	99	85.412	ENSPNAG00000027824	SMARCA5	92	90.294	Pygocentrus_nattereri
ENSXETG00000017566	smarca5	94	93.717	ENSRNOG00000018149	Smarca5	94	93.717	Rattus_norvegicus
ENSXETG00000017566	smarca5	94	93.610	ENSRBIG00000044644	SMARCA5	95	88.679	Rhinopithecus_bieti
ENSXETG00000017566	smarca5	94	93.610	ENSRROG00000029591	SMARCA5	94	93.610	Rhinopithecus_roxellana
ENSXETG00000017566	smarca5	95	93.228	ENSSBOG00000036257	SMARCA5	95	88.867	Saimiri_boliviensis_boliviensis
ENSXETG00000017566	smarca5	94	94.143	ENSSHAG00000008464	SMARCA5	94	94.143	Sarcophilus_harrisii
ENSXETG00000017566	smarca5	97	87.551	ENSSFOG00015013252	SMARCA5	94	87.551	Scleropages_formosus
ENSXETG00000017566	smarca5	95	92.585	ENSSPUG00000007604	SMARCA5	97	93.401	Sphenodon_punctatus
ENSXETG00000017566	smarca5	95	93.326	ENSSSCG00000009047	SMARCA5	95	92.259	Sus_scrofa
ENSXETG00000017566	smarca5	96	92.902	ENSTGUG00000002408	SMARCA5	94	92.902	Taeniopygia_guttata
ENSXETG00000017566	smarca5	95	93.242	ENSUAMG00000023495	SMARCA5	95	89.100	Ursus_americanus
ENSXETG00000017566	smarca5	95	93.242	ENSUMAG00000015324	SMARCA5	92	93.242	Ursus_maritimus
ENSXETG00000017566	smarca5	95	93.136	ENSVPAG00000008982	SMARCA5	92	90.872	Vicugna_pacos
ENSXETG00000017566	smarca5	95	93.242	ENSVVUG00000017473	SMARCA5	94	89.458	Vulpes_vulpes