EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000017599 (Gene tree)
Gene ID: -
Gene Symbol: rbm42
Alias: -
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 9607 bases
Position: chrGL173286.1:564991-574597
Accession: XB-GENE-5896695
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000038206	RRM_1	PF00076.22	6.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000038206	-	1693	-	ENSXETP00000038206	407 (aa)	-	G1K3I5

Gene Model

Click here to download ENSXETG00000017599's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000017599's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000017599	rbm42	100	58.548	ENSAPOG00000015109	rbm42	100	56.463	Acanthochromis_polyacanthus
ENSXETG00000017599	rbm42	100	56.706	ENSACIG00000010771	rbm42	100	54.897	Amphilophus_citrinellus
ENSXETG00000017599	rbm42	100	58.548	ENSAOCG00000008873	rbm42	100	56.236	Amphiprion_ocellaris
ENSXETG00000017599	rbm42	100	58.548	ENSAPEG00000012051	rbm42	99	56.236	Amphiprion_percula
ENSXETG00000017599	rbm42	100	58.057	ENSATEG00000000536	rbm42	100	58.411	Anabas_testudineus
ENSXETG00000017599	rbm42	100	58.879	ENSACLG00000004988	rbm42	100	55.405	Astatotilapia_calliptera
ENSXETG00000017599	rbm42	100	56.109	ENSAMXG00000016545	rbm42	100	56.635	Astyanax_mexicanus
ENSXETG00000017599	rbm42	59	43.852	WBGene00021901	tag-262	59	44.019	Caenorhabditis_elegans
ENSXETG00000017599	rbm42	97	58.353	ENSCSEG00000010248	rbm42	100	58.711	Cynoglossus_semilaevis
ENSXETG00000017599	rbm42	100	58.353	ENSCVAG00000015589	rbm42	100	59.624	Cyprinodon_variegatus
ENSXETG00000017599	rbm42	100	56.250	ENSDARG00000039910	rbm42	100	58.865	Danio_rerio
ENSXETG00000017599	rbm42	52	45.327	FBgn0037342	CG2931	81	41.353	Drosophila_melanogaster
ENSXETG00000017599	rbm42	100	56.854	ENSELUG00000022403	rbm42	100	55.506	Esox_lucius
ENSXETG00000017599	rbm42	52	73.094	ENSFHEG00000006764	rbm42	75	72.889	Fundulus_heteroclitus
ENSXETG00000017599	rbm42	52	69.507	ENSGMOG00000012660	rbm42	100	53.440	Gadus_morhua
ENSXETG00000017599	rbm42	76	58.438	ENSGAFG00000009059	rbm42	99	58.621	Gambusia_affinis
ENSXETG00000017599	rbm42	100	56.064	ENSGACG00000004170	rbm42	99	62.500	Gasterosteus_aculeatus
ENSXETG00000017599	rbm42	100	58.645	ENSHBUG00000011141	rbm42	100	55.180	Haplochromis_burtoni
ENSXETG00000017599	rbm42	100	56.948	ENSHCOG00000021214	rbm42	100	56.264	Hippocampus_comes
ENSXETG00000017599	rbm42	100	57.047	ENSIPUG00000022365	rbm42	99	56.208	Ictalurus_punctatus
ENSXETG00000017599	rbm42	91	51.562	ENSKMAG00000015287	rbm42	99	54.897	Kryptolebias_marmoratus
ENSXETG00000017599	rbm42	87	57.412	ENSLBEG00000004578	-	96	56.378	Labrus_bergylta
ENSXETG00000017599	rbm42	100	57.143	ENSLBEG00000017547	rbm42	100	56.858	Labrus_bergylta
ENSXETG00000017599	rbm42	100	56.167	ENSLOCG00000003368	rbm42	100	58.166	Lepisosteus_oculatus
ENSXETG00000017599	rbm42	100	57.075	ENSMAMG00000006708	rbm42	100	54.484	Mastacembelus_armatus
ENSXETG00000017599	rbm42	100	58.879	ENSMZEG00005025234	rbm42	100	55.405	Maylandia_zebra
ENSXETG00000017599	rbm42	100	52.567	ENSMALG00000015720	rbm42	97	57.592	Monopterus_albus
ENSXETG00000017599	rbm42	100	58.879	ENSONIG00000008029	rbm42	100	55.631	Oreochromis_niloticus
ENSXETG00000017599	rbm42	100	53.991	ENSORLG00020022507	rbm42	100	51.708	Oryzias_latipes_hni
ENSXETG00000017599	rbm42	100	57.783	ENSORLG00015000659	rbm42	100	57.991	Oryzias_latipes_hsok
ENSXETG00000017599	rbm42	57	69.959	ENSOMEG00000014332	rbm42	84	72.321	Oryzias_melastigma
ENSXETG00000017599	rbm42	100	58.756	ENSPKIG00000015165	rbm42	100	55.682	Paramormyrops_kingsleyae
ENSXETG00000017599	rbm42	56	76.642	ENSPSIG00000013935	-	68	84.553	Pelodiscus_sinensis
ENSXETG00000017599	rbm42	86	64.732	ENSPMGG00000003569	rbm42	100	91.429	Periophthalmus_magnuspinnatus
ENSXETG00000017599	rbm42	51	58.216	ENSPMAG00000008633	rbm42	100	48.541	Petromyzon_marinus
ENSXETG00000017599	rbm42	100	57.957	ENSPFOG00000007701	rbm42	100	59.005	Poecilia_formosa
ENSXETG00000017599	rbm42	100	57.957	ENSPLAG00000009405	rbm42	100	59.005	Poecilia_latipinna
ENSXETG00000017599	rbm42	100	57.720	ENSPMEG00000010375	rbm42	100	58.768	Poecilia_mexicana
ENSXETG00000017599	rbm42	100	57.957	ENSPREG00000018102	rbm42	100	59.005	Poecilia_reticulata
ENSXETG00000017599	rbm42	100	58.879	ENSPNYG00000014460	rbm42	100	55.405	Pundamilia_nyererei
ENSXETG00000017599	rbm42	100	57.757	ENSPNAG00000009961	rbm42	100	56.563	Pygocentrus_nattereri
ENSXETG00000017599	rbm42	100	55.457	ENSSFOG00015019227	rbm42	100	54.831	Scleropages_formosus
ENSXETG00000017599	rbm42	100	57.773	ENSSMAG00000011935	rbm42	100	55.111	Scophthalmus_maximus
ENSXETG00000017599	rbm42	100	59.670	ENSSDUG00000004033	rbm42	100	57.907	Seriola_dumerili
ENSXETG00000017599	rbm42	77	65.152	ENSSLDG00000009918	rbm42	100	71.569	Seriola_lalandi_dorsalis
ENSXETG00000017599	rbm42	100	58.080	ENSSPAG00000019871	rbm42	100	56.306	Stegastes_partitus
ENSXETG00000017599	rbm42	100	54.460	ENSTRUG00000024586	-	76	55.263	Takifugu_rubripes
ENSXETG00000017599	rbm42	99	54.084	ENSTNIG00000011669	rbm42	100	52.679	Tetraodon_nigroviridis
ENSXETG00000017599	rbm42	100	58.392	ENSXMAG00000012827	rbm42	100	58.824	Xiphophorus_maculatus