EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000017617 (Gene tree)
Gene ID: -
Gene Symbol: rpp40
Alias: -
Full Name: ribonuclease P/MRP 40kDa subunit
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 12607 bases
Position: chrGL172847.1:1119136-1131742
Accession: XB-GENE-977891
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000063248	Ribonuc_P_40	PF08584.11	4.5e-82	1	1
ENSXETP00000038248	Ribonuc_P_40	PF08584.11	1.2e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000038248	-	1074	-	ENSXETP00000038248	357 (aa)	-	F6U311
ENSXETT00000062234	-	1089	-	ENSXETP00000063248	362 (aa)	-	F7CVJ7

Gene Model

Click here to download ENSXETG00000017617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000017617's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000017617	rpp40	100	55.616	ENSG00000124787	RPP40	98	57.718	Homo_sapiens
ENSXETG00000017617	rpp40	61	36.364	ENSAPOG00000008660	rpp40	71	36.364	Acanthochromis_polyacanthus
ENSXETG00000017617	rpp40	100	53.699	ENSAMEG00000012938	RPP40	99	53.699	Ailuropoda_melanoleuca
ENSXETG00000017617	rpp40	99	38.547	ENSACIG00000003617	rpp40	98	38.547	Amphilophus_citrinellus
ENSXETG00000017617	rpp40	100	37.119	ENSAOCG00000011846	rpp40	100	37.569	Amphiprion_ocellaris
ENSXETG00000017617	rpp40	100	37.119	ENSAPEG00000001322	rpp40	100	37.569	Amphiprion_percula
ENSXETG00000017617	rpp40	99	35.833	ENSATEG00000006584	rpp40	99	37.222	Anabas_testudineus
ENSXETG00000017617	rpp40	82	62.752	ENSAPLG00000005691	RPP40	98	62.752	Anas_platyrhynchos
ENSXETG00000017617	rpp40	99	54.444	ENSACAG00000006550	RPP40	88	54.444	Anolis_carolinensis
ENSXETG00000017617	rpp40	100	53.151	ENSANAG00000029246	RPP40	99	53.151	Aotus_nancymaae
ENSXETG00000017617	rpp40	97	39.031	ENSACLG00000015883	rpp40	95	39.031	Astatotilapia_calliptera
ENSXETG00000017617	rpp40	99	46.389	ENSAMXG00000001755	rpp40	99	46.389	Astyanax_mexicanus
ENSXETG00000017617	rpp40	100	54.521	ENSBTAG00000003332	RPP40	99	54.521	Bos_taurus
ENSXETG00000017617	rpp40	100	53.973	ENSCJAG00000021373	RPP40	99	53.973	Callithrix_jacchus
ENSXETG00000017617	rpp40	100	53.973	ENSCAFG00000009435	RPP40	99	53.973	Canis_familiaris
ENSXETG00000017617	rpp40	100	53.973	ENSCAFG00020013380	RPP40	99	53.973	Canis_lupus_dingo
ENSXETG00000017617	rpp40	100	54.795	ENSCHIG00000016849	RPP40	100	55.921	Capra_hircus
ENSXETG00000017617	rpp40	100	54.545	ENSTSYG00000032857	RPP40	98	56.711	Carlito_syrichta
ENSXETG00000017617	rpp40	85	49.351	ENSCAPG00000004957	RPP40	91	49.351	Cavia_aperea
ENSXETG00000017617	rpp40	100	53.973	ENSCPOG00000005855	RPP40	99	53.973	Cavia_porcellus
ENSXETG00000017617	rpp40	100	53.699	ENSCCAG00000019809	RPP40	99	53.699	Cebus_capucinus
ENSXETG00000017617	rpp40	100	55.068	ENSCATG00000038787	RPP40	99	55.068	Cercocebus_atys
ENSXETG00000017617	rpp40	100	53.699	ENSCLAG00000003235	RPP40	99	53.699	Chinchilla_lanigera
ENSXETG00000017617	rpp40	100	55.342	ENSCSAG00000007307	RPP40	99	55.342	Chlorocebus_sabaeus
ENSXETG00000017617	rpp40	54	66.667	ENSCHOG00000005856	-	77	66.667	Choloepus_hoffmanni
ENSXETG00000017617	rpp40	99	58.449	ENSCPBG00000009003	RPP40	99	58.449	Chrysemys_picta_bellii
ENSXETG00000017617	rpp40	100	55.342	ENSCANG00000033965	RPP40	99	55.342	Colobus_angolensis_palliatus
ENSXETG00000017617	rpp40	100	53.444	ENSCGRG00001018328	Rpp40	99	53.889	Cricetulus_griseus_chok1gshd
ENSXETG00000017617	rpp40	100	53.444	ENSCGRG00000011344	Rpp40	99	53.889	Cricetulus_griseus_crigri
ENSXETG00000017617	rpp40	98	35.211	ENSCSEG00000015006	-	98	35.674	Cynoglossus_semilaevis
ENSXETG00000017617	rpp40	75	35.587	ENSCVAG00000012169	rpp40	100	36.000	Cyprinodon_variegatus
ENSXETG00000017617	rpp40	99	46.111	ENSDARG00000017605	rpp40	99	46.111	Danio_rerio
ENSXETG00000017617	rpp40	82	49.498	ENSDNOG00000048136	RPP40	99	49.498	Dasypus_novemcinctus
ENSXETG00000017617	rpp40	100	51.515	ENSDORG00000029944	-	99	51.944	Dipodomys_ordii
ENSXETG00000017617	rpp40	100	44.837	ENSDORG00000011196	-	99	45.330	Dipodomys_ordii
ENSXETG00000017617	rpp40	71	63.889	ENSETEG00000007458	RPP40	70	63.889	Echinops_telfairi
ENSXETG00000017617	rpp40	98	41.226	ENSEBUG00000000386	rpp40	99	41.226	Eptatretus_burgeri
ENSXETG00000017617	rpp40	100	53.973	ENSEASG00005012116	RPP40	80	53.973	Equus_asinus_asinus
ENSXETG00000017617	rpp40	100	53.699	ENSECAG00000017247	RPP40	80	53.699	Equus_caballus
ENSXETG00000017617	rpp40	82	44.108	ENSEEUG00000012087	RPP40	99	44.218	Erinaceus_europaeus
ENSXETG00000017617	rpp40	100	49.311	ENSELUG00000017004	rpp40	100	49.311	Esox_lucius
ENSXETG00000017617	rpp40	100	53.151	ENSFCAG00000009249	RPP40	99	53.151	Felis_catus
ENSXETG00000017617	rpp40	86	58.514	ENSFALG00000013166	RPP40	99	58.514	Ficedula_albicollis
ENSXETG00000017617	rpp40	100	54.521	ENSFDAG00000013001	-	99	55.000	Fukomys_damarensis
ENSXETG00000017617	rpp40	80	45.017	ENSFDAG00000000265	-	98	45.017	Fukomys_damarensis
ENSXETG00000017617	rpp40	100	37.778	ENSFHEG00000021429	rpp40	89	38.398	Fundulus_heteroclitus
ENSXETG00000017617	rpp40	89	35.535	ENSGMOG00000018653	rpp40	100	35.535	Gadus_morhua
ENSXETG00000017617	rpp40	99	57.300	ENSGALG00000036074	RPP40	99	57.300	Gallus_gallus
ENSXETG00000017617	rpp40	82	30.872	ENSGAFG00000004189	-	98	30.872	Gambusia_affinis
ENSXETG00000017617	rpp40	100	39.612	ENSGACG00000002472	rpp40	100	39.612	Gasterosteus_aculeatus
ENSXETG00000017617	rpp40	99	58.726	ENSGAGG00000012918	RPP40	99	58.726	Gopherus_agassizii
ENSXETG00000017617	rpp40	100	55.890	ENSGGOG00000013764	RPP40	99	55.890	Gorilla_gorilla
ENSXETG00000017617	rpp40	82	37.919	ENSHBUG00000009378	rpp40	84	37.919	Haplochromis_burtoni
ENSXETG00000017617	rpp40	100	54.521	ENSHGLG00000004871	RPP40	99	54.722	Heterocephalus_glaber_female
ENSXETG00000017617	rpp40	100	54.521	ENSHGLG00100002080	RPP40	99	54.722	Heterocephalus_glaber_male
ENSXETG00000017617	rpp40	95	30.678	ENSHCOG00000013264	-	91	31.014	Hippocampus_comes
ENSXETG00000017617	rpp40	100	47.253	ENSIPUG00000008951	RPP40	100	48.209	Ictalurus_punctatus
ENSXETG00000017617	rpp40	100	53.973	ENSSTOG00000011199	RPP40	99	53.973	Ictidomys_tridecemlineatus
ENSXETG00000017617	rpp40	100	52.732	ENSJJAG00000020629	Rpp40	99	52.909	Jaculus_jaculus
ENSXETG00000017617	rpp40	100	37.119	ENSKMAG00000019358	rpp40	100	37.119	Kryptolebias_marmoratus
ENSXETG00000017617	rpp40	100	39.167	ENSLBEG00000022724	rpp40	100	39.167	Labrus_bergylta
ENSXETG00000017617	rpp40	100	53.186	ENSLACG00000014848	RPP40	100	54.121	Latimeria_chalumnae
ENSXETG00000017617	rpp40	100	50.549	ENSLOCG00000011650	rpp40	99	50.549	Lepisosteus_oculatus
ENSXETG00000017617	rpp40	82	55.034	ENSLAFG00000007530	RPP40	98	55.034	Loxodonta_africana
ENSXETG00000017617	rpp40	100	55.068	ENSMFAG00000043100	RPP40	99	55.068	Macaca_fascicularis
ENSXETG00000017617	rpp40	100	55.068	ENSMMUG00000004966	RPP40	99	55.068	Macaca_mulatta
ENSXETG00000017617	rpp40	100	55.068	ENSMNEG00000041986	RPP40	98	57.047	Macaca_nemestrina
ENSXETG00000017617	rpp40	99	49.167	ENSMLEG00000040851	RPP40	100	57.692	Mandrillus_leucophaeus
ENSXETG00000017617	rpp40	99	38.827	ENSMAMG00000019551	rpp40	98	38.827	Mastacembelus_armatus
ENSXETG00000017617	rpp40	99	39.665	ENSMZEG00005019475	rpp40	99	39.665	Maylandia_zebra
ENSXETG00000017617	rpp40	99	55.402	ENSMGAG00000004009	RPP40	99	55.402	Meleagris_gallopavo
ENSXETG00000017617	rpp40	100	53.425	ENSMAUG00000010268	Rpp40	99	53.611	Mesocricetus_auratus
ENSXETG00000017617	rpp40	100	53.425	ENSMICG00000003297	RPP40	99	50.829	Microcebus_murinus
ENSXETG00000017617	rpp40	100	55.342	ENSMOCG00000000305	Rpp40	99	55.342	Microtus_ochrogaster
ENSXETG00000017617	rpp40	100	35.854	ENSMMOG00000020591	-	100	35.854	Mola_mola
ENSXETG00000017617	rpp40	100	54.795	ENSMODG00000009826	RPP40	99	54.795	Monodelphis_domestica
ENSXETG00000017617	rpp40	100	38.781	ENSMALG00000020133	rpp40	99	39.385	Monopterus_albus
ENSXETG00000017617	rpp40	100	54.247	MGP_CAROLIEiJ_G0018429	Rpp40	99	54.247	Mus_caroli
ENSXETG00000017617	rpp40	100	54.521	ENSMUSG00000021418	Rpp40	99	55.000	Mus_musculus
ENSXETG00000017617	rpp40	100	53.699	MGP_PahariEiJ_G0019497	Rpp40	99	54.167	Mus_pahari
ENSXETG00000017617	rpp40	100	54.247	MGP_SPRETEiJ_G0019309	Rpp40	99	54.722	Mus_spretus
ENSXETG00000017617	rpp40	100	53.973	ENSMPUG00000000530	RPP40	93	53.973	Mustela_putorius_furo
ENSXETG00000017617	rpp40	100	53.151	ENSMLUG00000000501	RPP40	99	53.151	Myotis_lucifugus
ENSXETG00000017617	rpp40	95	51.327	ENSNGAG00000022529	-	99	51.327	Nannospalax_galili
ENSXETG00000017617	rpp40	100	54.521	ENSNGAG00000023955	-	99	54.521	Nannospalax_galili
ENSXETG00000017617	rpp40	70	38.672	ENSNBRG00000017465	rpp40	72	39.062	Neolamprologus_brichardi
ENSXETG00000017617	rpp40	100	56.438	ENSNLEG00000034397	RPP40	99	56.438	Nomascus_leucogenys
ENSXETG00000017617	rpp40	100	49.863	ENSMEUG00000005300	RPP40	99	49.863	Notamacropus_eugenii
ENSXETG00000017617	rpp40	100	49.041	ENSODEG00000018153	-	99	49.722	Octodon_degus
ENSXETG00000017617	rpp40	78	53.521	ENSODEG00000006170	-	95	53.521	Octodon_degus
ENSXETG00000017617	rpp40	100	54.294	ENSODEG00000007255	-	99	54.294	Octodon_degus
ENSXETG00000017617	rpp40	99	40.223	ENSONIG00000014016	rpp40	98	40.223	Oreochromis_niloticus
ENSXETG00000017617	rpp40	82	59.197	ENSOANG00000001200	RPP40	98	59.197	Ornithorhynchus_anatinus
ENSXETG00000017617	rpp40	99	49.307	ENSOCUG00000000354	RPP40	99	49.307	Oryctolagus_cuniculus
ENSXETG00000017617	rpp40	99	37.396	ENSORLG00000008242	-	100	37.396	Oryzias_latipes
ENSXETG00000017617	rpp40	99	36.842	ENSORLG00020013745	-	91	36.842	Oryzias_latipes_hni
ENSXETG00000017617	rpp40	99	37.119	ENSORLG00015000887	-	100	37.119	Oryzias_latipes_hsok
ENSXETG00000017617	rpp40	99	37.396	ENSOMEG00000002747	rpp40	100	37.396	Oryzias_melastigma
ENSXETG00000017617	rpp40	100	54.247	ENSOGAG00000006055	RPP40	99	54.247	Otolemur_garnettii
ENSXETG00000017617	rpp40	85	55.663	ENSOARG00000018783	RPP40	100	56.250	Ovis_aries
ENSXETG00000017617	rpp40	100	55.342	ENSPPAG00000023703	RPP40	99	55.342	Pan_paniscus
ENSXETG00000017617	rpp40	100	53.151	ENSPPRG00000005612	RPP40	99	53.151	Panthera_pardus
ENSXETG00000017617	rpp40	100	49.315	ENSPTIG00000018847	RPP40	99	49.315	Panthera_tigris_altaica
ENSXETG00000017617	rpp40	100	55.616	ENSPTRG00000017690	RPP40	99	55.616	Pan_troglodytes
ENSXETG00000017617	rpp40	100	55.616	ENSPANG00000017865	RPP40	99	55.616	Papio_anubis
ENSXETG00000017617	rpp40	99	48.324	ENSPKIG00000006311	rpp40	99	48.324	Paramormyrops_kingsleyae
ENSXETG00000017617	rpp40	62	59.459	ENSPSIG00000007854	RPP40	100	59.459	Pelodiscus_sinensis
ENSXETG00000017617	rpp40	93	48.961	ENSPEMG00000020809	Rpp40	91	48.961	Peromyscus_maniculatus_bairdii
ENSXETG00000017617	rpp40	76	50.730	ENSPMAG00000008412	rpp40	99	50.730	Petromyzon_marinus
ENSXETG00000017617	rpp40	100	54.795	ENSPCIG00000010682	RPP40	99	54.795	Phascolarctos_cinereus
ENSXETG00000017617	rpp40	100	33.978	ENSPFOG00000011460	rpp40	99	34.699	Poecilia_formosa
ENSXETG00000017617	rpp40	100	33.333	ENSPLAG00000001334	rpp40	100	34.066	Poecilia_latipinna
ENSXETG00000017617	rpp40	100	33.889	ENSPMEG00000007721	rpp40	100	34.530	Poecilia_mexicana
ENSXETG00000017617	rpp40	100	35.000	ENSPREG00000009215	rpp40	100	35.440	Poecilia_reticulata
ENSXETG00000017617	rpp40	100	55.342	ENSPPYG00000016194	RPP40	99	55.342	Pongo_abelii
ENSXETG00000017617	rpp40	50	51.630	ENSPCAG00000002700	-	98	51.630	Procavia_capensis
ENSXETG00000017617	rpp40	100	53.973	ENSPCOG00000003907	RPP40	99	54.017	Propithecus_coquereli
ENSXETG00000017617	rpp40	100	53.973	ENSPVAG00000011325	RPP40	99	53.973	Pteropus_vampyrus
ENSXETG00000017617	rpp40	82	36.913	ENSPNYG00000004432	rpp40	98	36.913	Pundamilia_nyererei
ENSXETG00000017617	rpp40	99	45.810	ENSPNAG00000019125	rpp40	99	45.810	Pygocentrus_nattereri
ENSXETG00000017617	rpp40	100	55.342	ENSRNOG00000016226	Rpp40	98	58.054	Rattus_norvegicus
ENSXETG00000017617	rpp40	100	55.342	ENSRBIG00000035800	RPP40	98	57.383	Rhinopithecus_bieti
ENSXETG00000017617	rpp40	100	55.342	ENSRROG00000039116	RPP40	99	55.342	Rhinopithecus_roxellana
ENSXETG00000017617	rpp40	100	53.425	ENSSBOG00000020297	RPP40	99	53.425	Saimiri_boliviensis_boliviensis
ENSXETG00000017617	rpp40	76	61.091	ENSSHAG00000002102	RPP40	99	61.091	Sarcophilus_harrisii
ENSXETG00000017617	rpp40	100	49.451	ENSSFOG00015001142	rpp40	81	49.451	Scleropages_formosus
ENSXETG00000017617	rpp40	99	38.268	ENSSDUG00000007202	rpp40	99	38.268	Seriola_dumerili
ENSXETG00000017617	rpp40	99	38.547	ENSSLDG00000017563	rpp40	99	38.547	Seriola_lalandi_dorsalis
ENSXETG00000017617	rpp40	99	55.556	ENSSPUG00000017487	-	99	55.556	Sphenodon_punctatus
ENSXETG00000017617	rpp40	81	54.915	ENSSPUG00000018950	-	99	54.915	Sphenodon_punctatus
ENSXETG00000017617	rpp40	99	38.375	ENSSPAG00000022716	rpp40	99	38.547	Stegastes_partitus
ENSXETG00000017617	rpp40	99	52.778	ENSSSCG00000000998	RPP40	98	54.362	Sus_scrofa
ENSXETG00000017617	rpp40	99	58.380	ENSTGUG00000002258	-	99	58.380	Taeniopygia_guttata
ENSXETG00000017617	rpp40	98	38.983	ENSTRUG00000003755	rpp40	98	38.983	Takifugu_rubripes
ENSXETG00000017617	rpp40	100	36.389	ENSTNIG00000003077	rpp40	100	36.740	Tetraodon_nigroviridis
ENSXETG00000017617	rpp40	69	41.600	ENSTBEG00000014467	-	73	41.600	Tupaia_belangeri
ENSXETG00000017617	rpp40	100	50.137	ENSTTRG00000007319	RPP40	100	50.137	Tursiops_truncatus
ENSXETG00000017617	rpp40	100	53.699	ENSUAMG00000002159	RPP40	99	61.538	Ursus_americanus
ENSXETG00000017617	rpp40	100	53.699	ENSUMAG00000018639	RPP40	94	53.699	Ursus_maritimus
ENSXETG00000017617	rpp40	51	46.995	ENSVPAG00000004652	-	63	47.253	Vicugna_pacos
ENSXETG00000017617	rpp40	100	53.973	ENSVVUG00000005451	RPP40	99	53.973	Vulpes_vulpes