EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000017668 (Gene tree)
Gene ID: -
Gene Symbol: rbm19
Alias: -
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 25078 bases
Position: chrGL173091.1:654001-679078
Accession: XB-GENE-922190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000038351	RRM_1	PF00076.22	5e-85	1	5
ENSXETP00000038351	RRM_1	PF00076.22	5e-85	2	5
ENSXETP00000038351	RRM_1	PF00076.22	5e-85	3	5
ENSXETP00000038351	RRM_1	PF00076.22	5e-85	4	5
ENSXETP00000038351	RRM_1	PF00076.22	5e-85	5	5
ENSXETP00000058493	RRM_1	PF00076.22	5.5e-46	1	3
ENSXETP00000058493	RRM_1	PF00076.22	5.5e-46	2	3
ENSXETP00000058493	RRM_1	PF00076.22	5.5e-46	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000038351	-	2818	-	ENSXETP00000038351	914 (aa)	-	F7B8P2
ENSXETT00000065427	-	1702	-	ENSXETP00000058493	542 (aa)	-	F6WSP5

Gene Model

Click here to download ENSXETG00000017668's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000017668's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000017668	rbm19	52	37.333	ENSXETG00000022831	pabpc1l	55	37.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000017668	rbm19	99	60.748	ENSG00000122965	RBM19	91	70.588	Homo_sapiens
ENSXETG00000017668	rbm19	100	56.859	ENSAPOG00000010507	rbm19	99	57.400	Acanthochromis_polyacanthus
ENSXETG00000017668	rbm19	100	58.866	ENSAMEG00000008544	RBM19	99	59.896	Ailuropoda_melanoleuca
ENSXETG00000017668	rbm19	98	58.539	ENSACIG00000017780	rbm19	99	57.540	Amphilophus_citrinellus
ENSXETG00000017668	rbm19	100	57.712	ENSAOCG00000008554	rbm19	99	57.203	Amphiprion_ocellaris
ENSXETG00000017668	rbm19	98	58.760	ENSAPEG00000022381	rbm19	97	58.643	Amphiprion_percula
ENSXETG00000017668	rbm19	98	57.816	ENSATEG00000007000	rbm19	99	57.495	Anabas_testudineus
ENSXETG00000017668	rbm19	92	59.622	ENSAPLG00000015319	RBM19	99	58.980	Anas_platyrhynchos
ENSXETG00000017668	rbm19	100	61.083	ENSACAG00000005065	RBM19	99	61.300	Anolis_carolinensis
ENSXETG00000017668	rbm19	99	60.354	ENSANAG00000024136	RBM19	99	60.288	Aotus_nancymaae
ENSXETG00000017668	rbm19	99	54.487	ENSACLG00000001399	rbm19	99	53.943	Astatotilapia_calliptera
ENSXETG00000017668	rbm19	66	60.231	ENSAMXG00000017073	rbm19	99	53.476	Astyanax_mexicanus
ENSXETG00000017668	rbm19	100	63.158	ENSBTAG00000031824	RBM19	99	62.735	Bos_taurus
ENSXETG00000017668	rbm19	84	40.580	WBGene00004315	rbd-1	99	49.495	Caenorhabditis_elegans
ENSXETG00000017668	rbm19	99	60.766	ENSCJAG00000009798	RBM19	99	60.888	Callithrix_jacchus
ENSXETG00000017668	rbm19	99	60.543	ENSCAFG00000009146	RBM19	98	60.584	Canis_familiaris
ENSXETG00000017668	rbm19	99	60.543	ENSCAFG00020017862	RBM19	98	60.584	Canis_lupus_dingo
ENSXETG00000017668	rbm19	100	61.354	ENSCHIG00000014917	RBM19	99	63.541	Capra_hircus
ENSXETG00000017668	rbm19	94	57.914	ENSTSYG00000007207	RBM19	96	59.242	Carlito_syrichta
ENSXETG00000017668	rbm19	99	60.814	ENSCAPG00000006869	RBM19	98	60.149	Cavia_aperea
ENSXETG00000017668	rbm19	99	62.128	ENSCPOG00000026629	RBM19	99	61.441	Cavia_porcellus
ENSXETG00000017668	rbm19	99	60.436	ENSCCAG00000021665	-	99	61.267	Cebus_capucinus
ENSXETG00000017668	rbm19	94	52.174	ENSCCAG00000026637	-	99	54.080	Cebus_capucinus
ENSXETG00000017668	rbm19	99	60.632	ENSCATG00000035841	RBM19	99	60.824	Cercocebus_atys
ENSXETG00000017668	rbm19	99	60.247	ENSCLAG00000009965	RBM19	99	60.062	Chinchilla_lanigera
ENSXETG00000017668	rbm19	99	58.824	ENSCSAG00000002352	RBM19	96	65.948	Chlorocebus_sabaeus
ENSXETG00000017668	rbm19	99	64.657	ENSCPBG00000011990	RBM19	99	64.346	Chrysemys_picta_bellii
ENSXETG00000017668	rbm19	79	50.727	ENSCING00000023076	-	96	49.353	Ciona_intestinalis
ENSXETG00000017668	rbm19	99	61.522	ENSCANG00000035927	RBM19	99	61.314	Colobus_angolensis_palliatus
ENSXETG00000017668	rbm19	99	62.355	ENSCGRG00001000323	Rbm19	99	61.157	Cricetulus_griseus_chok1gshd
ENSXETG00000017668	rbm19	99	62.355	ENSCGRG00000010371	Rbm19	99	61.157	Cricetulus_griseus_crigri
ENSXETG00000017668	rbm19	100	57.503	ENSCSEG00000017436	rbm19	99	57.624	Cynoglossus_semilaevis
ENSXETG00000017668	rbm19	100	58.999	ENSCVAG00000000300	rbm19	99	58.058	Cyprinodon_variegatus
ENSXETG00000017668	rbm19	99	56.383	ENSDARG00000042590	rbm19	99	56.329	Danio_rerio
ENSXETG00000017668	rbm19	100	60.208	ENSDNOG00000024534	RBM19	96	60.331	Dasypus_novemcinctus
ENSXETG00000017668	rbm19	97	60.495	ENSDORG00000008549	Rbm19	100	60.718	Dipodomys_ordii
ENSXETG00000017668	rbm19	70	39.734	FBgn0036018	CG3335	73	39.734	Drosophila_melanogaster
ENSXETG00000017668	rbm19	76	76.812	ENSETEG00000016887	-	57	76.812	Echinops_telfairi
ENSXETG00000017668	rbm19	93	44.256	ENSEBUG00000008521	-	94	45.548	Eptatretus_burgeri
ENSXETG00000017668	rbm19	100	60.458	ENSEASG00005009452	RBM19	99	60.475	Equus_asinus_asinus
ENSXETG00000017668	rbm19	100	60.540	ENSECAG00000023716	RBM19	99	60.350	Equus_caballus
ENSXETG00000017668	rbm19	99	57.737	ENSELUG00000012561	rbm19	99	57.631	Esox_lucius
ENSXETG00000017668	rbm19	100	60.546	ENSFCAG00000002962	RBM19	98	60.673	Felis_catus
ENSXETG00000017668	rbm19	98	61.415	ENSFALG00000007768	RBM19	99	60.463	Ficedula_albicollis
ENSXETG00000017668	rbm19	99	59.688	ENSFDAG00000004629	RBM19	99	58.927	Fukomys_damarensis
ENSXETG00000017668	rbm19	99	57.372	ENSFHEG00000012578	rbm19	99	58.466	Fundulus_heteroclitus
ENSXETG00000017668	rbm19	97	55.568	ENSGMOG00000013120	rbm19	100	55.027	Gadus_morhua
ENSXETG00000017668	rbm19	98	62.473	ENSGALG00000008289	RBM19	99	60.480	Gallus_gallus
ENSXETG00000017668	rbm19	99	58.547	ENSGAFG00000012337	rbm19	99	58.547	Gambusia_affinis
ENSXETG00000017668	rbm19	99	55.710	ENSGACG00000009462	rbm19	100	56.699	Gasterosteus_aculeatus
ENSXETG00000017668	rbm19	65	68.930	ENSGAGG00000019457	RBM19	99	69.270	Gopherus_agassizii
ENSXETG00000017668	rbm19	99	61.331	ENSGGOG00000007371	RBM19	99	61.435	Gorilla_gorilla
ENSXETG00000017668	rbm19	99	55.983	ENSHBUG00000009047	rbm19	99	56.051	Haplochromis_burtoni
ENSXETG00000017668	rbm19	99	60.695	ENSHGLG00000010899	RBM19	99	60.296	Heterocephalus_glaber_female
ENSXETG00000017668	rbm19	99	59.979	ENSHGLG00100017936	RBM19	99	59.666	Heterocephalus_glaber_male
ENSXETG00000017668	rbm19	99	56.902	ENSHCOG00000016446	rbm19	100	56.394	Hippocampus_comes
ENSXETG00000017668	rbm19	100	57.761	ENSIPUG00000023849	rbm19	100	57.761	Ictalurus_punctatus
ENSXETG00000017668	rbm19	100	57.429	ENSKMAG00000014807	rbm19	99	56.946	Kryptolebias_marmoratus
ENSXETG00000017668	rbm19	99	55.841	ENSLBEG00000012897	rbm19	99	54.931	Labrus_bergylta
ENSXETG00000017668	rbm19	67	58.075	ENSLACG00000012030	RBM19	88	63.258	Latimeria_chalumnae
ENSXETG00000017668	rbm19	100	59.559	ENSLOCG00000008341	rbm19	100	58.516	Lepisosteus_oculatus
ENSXETG00000017668	rbm19	94	58.349	ENSLAFG00000004187	RBM19	100	60.495	Loxodonta_africana
ENSXETG00000017668	rbm19	99	61.331	ENSMFAG00000046091	RBM19	99	59.110	Macaca_fascicularis
ENSXETG00000017668	rbm19	99	61.331	ENSMMUG00000010496	RBM19	99	61.522	Macaca_mulatta
ENSXETG00000017668	rbm19	99	56.705	ENSMNEG00000028452	RBM19	99	59.645	Macaca_nemestrina
ENSXETG00000017668	rbm19	99	59.729	ENSMLEG00000034550	RBM19	99	59.916	Mandrillus_leucophaeus
ENSXETG00000017668	rbm19	99	57.688	ENSMAMG00000014397	rbm19	99	56.526	Mastacembelus_armatus
ENSXETG00000017668	rbm19	99	57.979	ENSMZEG00005016607	rbm19	99	57.712	Maylandia_zebra
ENSXETG00000017668	rbm19	97	53.465	ENSMGAG00000010087	RBM19	99	52.484	Meleagris_gallopavo
ENSXETG00000017668	rbm19	99	61.273	ENSMAUG00000019290	Rbm19	99	61.290	Mesocricetus_auratus
ENSXETG00000017668	rbm19	100	61.674	ENSMICG00000014423	RBM19	99	60.372	Microcebus_murinus
ENSXETG00000017668	rbm19	99	55.684	ENSMMOG00000017839	rbm19	99	55.461	Mola_mola
ENSXETG00000017668	rbm19	99	62.513	ENSMODG00000003597	RBM19	99	62.764	Monodelphis_domestica
ENSXETG00000017668	rbm19	98	57.281	ENSMALG00000012647	rbm19	98	57.249	Monopterus_albus
ENSXETG00000017668	rbm19	94	58.101	MGP_CAROLIEiJ_G0027656	Rbm19	99	61.123	Mus_caroli
ENSXETG00000017668	rbm19	99	61.435	ENSMUSG00000029594	Rbm19	99	61.123	Mus_musculus
ENSXETG00000017668	rbm19	99	62.055	MGP_PahariEiJ_G0024238	Rbm19	99	61.331	Mus_pahari
ENSXETG00000017668	rbm19	99	61.626	MGP_SPRETEiJ_G0028656	Rbm19	99	60.748	Mus_spretus
ENSXETG00000017668	rbm19	100	60.041	ENSMPUG00000002694	RBM19	99	60.270	Mustela_putorius_furo
ENSXETG00000017668	rbm19	100	60.678	ENSMLUG00000015075	RBM19	99	60.718	Myotis_lucifugus
ENSXETG00000017668	rbm19	100	61.409	ENSNGAG00000009076	Rbm19	99	60.354	Nannospalax_galili
ENSXETG00000017668	rbm19	99	57.112	ENSNBRG00000005913	rbm19	99	57.325	Neolamprologus_brichardi
ENSXETG00000017668	rbm19	99	61.082	ENSNLEG00000000190	RBM19	99	61.394	Nomascus_leucogenys
ENSXETG00000017668	rbm19	93	58.281	ENSMEUG00000004045	RBM19	90	57.709	Notamacropus_eugenii
ENSXETG00000017668	rbm19	99	60.744	ENSOPRG00000012064	RBM19	99	60.311	Ochotona_princeps
ENSXETG00000017668	rbm19	99	61.422	ENSODEG00000012977	RBM19	99	61.530	Octodon_degus
ENSXETG00000017668	rbm19	99	58.203	ENSONIG00000013576	rbm19	99	58.342	Oreochromis_niloticus
ENSXETG00000017668	rbm19	99	60.168	ENSOCUG00000009398	RBM19	99	59.666	Oryctolagus_cuniculus
ENSXETG00000017668	rbm19	100	56.663	ENSORLG00000008077	rbm19	99	58.082	Oryzias_latipes
ENSXETG00000017668	rbm19	99	56.674	ENSORLG00020013187	rbm19	99	58.155	Oryzias_latipes_hni
ENSXETG00000017668	rbm19	100	56.918	ENSORLG00015001774	rbm19	99	57.203	Oryzias_latipes_hsok
ENSXETG00000017668	rbm19	100	59.263	ENSOMEG00000003334	rbm19	99	58.755	Oryzias_melastigma
ENSXETG00000017668	rbm19	94	58.679	ENSOGAG00000000602	RBM19	100	60.834	Otolemur_garnettii
ENSXETG00000017668	rbm19	100	62.357	ENSOARG00000006827	RBM19	99	63.819	Ovis_aries
ENSXETG00000017668	rbm19	99	60.829	ENSPPAG00000043712	RBM19	99	61.538	Pan_paniscus
ENSXETG00000017668	rbm19	100	60.860	ENSPPRG00000023027	RBM19	98	60.673	Panthera_pardus
ENSXETG00000017668	rbm19	100	56.614	ENSPTIG00000011096	RBM19	99	56.962	Panthera_tigris_altaica
ENSXETG00000017668	rbm19	99	60.829	ENSPTRG00000005494	RBM19	99	61.435	Pan_troglodytes
ENSXETG00000017668	rbm19	99	60.707	ENSPANG00000004795	RBM19	98	59.101	Papio_anubis
ENSXETG00000017668	rbm19	99	57.827	ENSPKIG00000017095	rbm19	99	57.856	Paramormyrops_kingsleyae
ENSXETG00000017668	rbm19	89	61.932	ENSPSIG00000008191	RBM19	99	61.467	Pelodiscus_sinensis
ENSXETG00000017668	rbm19	89	60.032	ENSPMGG00000019087	rbm19	98	60.323	Periophthalmus_magnuspinnatus
ENSXETG00000017668	rbm19	99	62.173	ENSPEMG00000018058	Rbm19	99	61.427	Peromyscus_maniculatus_bairdii
ENSXETG00000017668	rbm19	99	60.829	ENSPCIG00000028861	RBM19	99	61.129	Phascolarctos_cinereus
ENSXETG00000017668	rbm19	99	58.236	ENSPFOG00000015300	rbm19	99	58.316	Poecilia_formosa
ENSXETG00000017668	rbm19	99	58.830	ENSPLAG00000000059	rbm19	99	58.476	Poecilia_latipinna
ENSXETG00000017668	rbm19	99	58.511	ENSPMEG00000018585	rbm19	99	58.661	Poecilia_mexicana
ENSXETG00000017668	rbm19	99	59.192	ENSPREG00000000978	rbm19	99	59.509	Poecilia_reticulata
ENSXETG00000017668	rbm19	99	59.001	ENSPPYG00000004993	RBM19	99	58.247	Pongo_abelii
ENSXETG00000017668	rbm19	99	61.250	ENSPCOG00000016190	RBM19	99	60.041	Propithecus_coquereli
ENSXETG00000017668	rbm19	99	59.834	ENSPVAG00000011618	RBM19	99	60.167	Pteropus_vampyrus
ENSXETG00000017668	rbm19	99	57.386	ENSPNYG00000017434	rbm19	99	57.900	Pundamilia_nyererei
ENSXETG00000017668	rbm19	98	58.110	ENSPNAG00000012069	rbm19	99	57.806	Pygocentrus_nattereri
ENSXETG00000017668	rbm19	99	60.788	ENSRNOG00000001397	Rbm19	99	60.852	Rattus_norvegicus
ENSXETG00000017668	rbm19	99	61.954	ENSRBIG00000041419	RBM19	99	61.314	Rhinopithecus_bieti
ENSXETG00000017668	rbm19	99	61.850	ENSRROG00000031938	RBM19	99	61.940	Rhinopithecus_roxellana
ENSXETG00000017668	rbm19	94	43.871	YPR112C	-	77	38.376	Saccharomyces_cerevisiae
ENSXETG00000017668	rbm19	99	58.359	ENSSBOG00000021434	-	99	58.161	Saimiri_boliviensis_boliviensis
ENSXETG00000017668	rbm19	94	53.008	ENSSBOG00000022679	-	99	52.354	Saimiri_boliviensis_boliviensis
ENSXETG00000017668	rbm19	99	62.062	ENSSHAG00000012256	RBM19	99	62.040	Sarcophilus_harrisii
ENSXETG00000017668	rbm19	99	56.426	ENSSFOG00015005124	rbm19	99	55.255	Scleropages_formosus
ENSXETG00000017668	rbm19	100	57.834	ENSSMAG00000011828	rbm19	99	56.780	Scophthalmus_maximus
ENSXETG00000017668	rbm19	99	58.654	ENSSDUG00000013544	rbm19	99	57.692	Seriola_dumerili
ENSXETG00000017668	rbm19	70	60.153	ENSSLDG00000025413	rbm19	76	59.969	Seriola_lalandi_dorsalis
ENSXETG00000017668	rbm19	67	69.338	ENSSPUG00000011064	RBM19	98	69.284	Sphenodon_punctatus
ENSXETG00000017668	rbm19	97	57.582	ENSSPAG00000018685	rbm19	98	57.473	Stegastes_partitus
ENSXETG00000017668	rbm19	100	63.358	ENSSSCG00000009868	RBM19	99	63.235	Sus_scrofa
ENSXETG00000017668	rbm19	100	61.715	ENSTGUG00000009017	RBM19	100	60.924	Taeniopygia_guttata
ENSXETG00000017668	rbm19	99	56.859	ENSTRUG00000016032	rbm19	99	56.348	Takifugu_rubripes
ENSXETG00000017668	rbm19	74	68.627	ENSTBEG00000000703	RBM19	69	81.967	Tupaia_belangeri
ENSXETG00000017668	rbm19	82	60.656	ENSTTRG00000003987	RBM19	84	60.984	Tursiops_truncatus
ENSXETG00000017668	rbm19	99	59.053	ENSUAMG00000002076	RBM19	98	60.063	Ursus_americanus
ENSXETG00000017668	rbm19	99	59.479	ENSUMAG00000010816	RBM19	100	60.480	Ursus_maritimus
ENSXETG00000017668	rbm19	99	60.417	ENSVVUG00000007886	RBM19	98	60.145	Vulpes_vulpes
ENSXETG00000017668	rbm19	99	56.754	ENSXCOG00000016995	rbm19	99	56.590	Xiphophorus_couchianus
ENSXETG00000017668	rbm19	99	58.786	ENSXMAG00000007641	rbm19	99	58.911	Xiphophorus_maculatus