EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000017895 (Gene tree)
Gene ID: -
Gene Symbol: exd1
Alias: -
Full Name: exonuclease 3'-5' domain containing 1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 14007 bases
Position: chrGL173137.1:547610-561616
Accession: XB-GENE-993341
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000063198	DNA_pol_A_exo1	PF01612.20	8e-08	1	1
ENSXETP00000038788	DNA_pol_A_exo1	PF01612.20	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000038788	-	1332	-	ENSXETP00000038788	444 (aa)	-	F6VJL5
ENSXETT00000063820	-	1167	-	ENSXETP00000063198	389 (aa)	-	F7DRE1

Gene Model

Click here to download ENSXETG00000017895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000017895's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000017895	exd1	95	48.861	ENSG00000178997	EXD1	68	49.367	Homo_sapiens
ENSXETG00000017895	exd1	97	37.533	ENSAPOG00000004287	-	69	49.756	Acanthochromis_polyacanthus
ENSXETG00000017895	exd1	95	49.242	ENSAMEG00000016793	EXD1	68	49.242	Ailuropoda_melanoleuca
ENSXETG00000017895	exd1	97	40.838	ENSAOCG00000009355	-	71	40.838	Amphiprion_ocellaris
ENSXETG00000017895	exd1	80	43.492	ENSAPEG00000002194	-	86	43.492	Amphiprion_percula
ENSXETG00000017895	exd1	65	44.094	ENSATEG00000002623	-	57	44.094	Anabas_testudineus
ENSXETG00000017895	exd1	51	53.266	ENSAPLG00000013650	-	99	52.736	Anas_platyrhynchos
ENSXETG00000017895	exd1	96	46.717	ENSACAG00000003676	EXD1	99	46.717	Anolis_carolinensis
ENSXETG00000017895	exd1	95	48.861	ENSANAG00000029058	EXD1	68	48.861	Aotus_nancymaae
ENSXETG00000017895	exd1	97	39.119	ENSACLG00000001361	-	72	39.119	Astatotilapia_calliptera
ENSXETG00000017895	exd1	98	39.378	ENSAMXG00000026016	-	82	36.629	Astyanax_mexicanus
ENSXETG00000017895	exd1	68	59.023	ENSBTAG00000008363	EXD1	55	59.770	Bos_taurus
ENSXETG00000017895	exd1	95	47.480	ENSCJAG00000020765	EXD1	67	47.480	Callithrix_jacchus
ENSXETG00000017895	exd1	95	50.127	ENSCAFG00000009510	EXD1	68	50.127	Canis_familiaris
ENSXETG00000017895	exd1	62	59.016	ENSCAFG00020005504	EXD1	57	60.251	Canis_lupus_dingo
ENSXETG00000017895	exd1	95	48.586	ENSCHIG00000019606	EXD1	69	48.586	Capra_hircus
ENSXETG00000017895	exd1	95	48.942	ENSCPOG00000010573	EXD1	67	48.942	Cavia_porcellus
ENSXETG00000017895	exd1	95	46.684	ENSCCAG00000016905	EXD1	68	46.684	Cebus_capucinus
ENSXETG00000017895	exd1	95	49.620	ENSCATG00000037400	EXD1	68	49.620	Cercocebus_atys
ENSXETG00000017895	exd1	68	42.007	ENSCSAG00000007647	EXD1	60	40.323	Chlorocebus_sabaeus
ENSXETG00000017895	exd1	94	50.000	ENSCPBG00000013511	EXD1	64	50.508	Chrysemys_picta_bellii
ENSXETG00000017895	exd1	95	48.011	ENSCANG00000036848	EXD1	67	48.011	Colobus_angolensis_palliatus
ENSXETG00000017895	exd1	95	47.739	ENSCGRG00001011355	Exd1	67	47.739	Cricetulus_griseus_chok1gshd
ENSXETG00000017895	exd1	95	48.101	ENSCGRG00000011633	Exd1	68	48.101	Cricetulus_griseus_crigri
ENSXETG00000017895	exd1	94	41.398	ENSCSEG00000000904	-	68	41.398	Cynoglossus_semilaevis
ENSXETG00000017895	exd1	61	38.655	ENSCVAG00000013735	-	91	37.395	Cyprinodon_variegatus
ENSXETG00000017895	exd1	88	39.244	ENSDARG00000098669	exd1	91	41.754	Danio_rerio
ENSXETG00000017895	exd1	95	50.253	ENSDNOG00000011410	EXD1	68	50.253	Dasypus_novemcinctus
ENSXETG00000017895	exd1	69	56.044	ENSDORG00000012079	Exd1	56	57.143	Dipodomys_ordii
ENSXETG00000017895	exd1	54	40.654	ENSEBUG00000005530	-	79	39.286	Eptatretus_burgeri
ENSXETG00000017895	exd1	95	49.347	ENSEASG00005016394	EXD1	68	49.347	Equus_asinus_asinus
ENSXETG00000017895	exd1	95	48.724	ENSECAG00000021250	EXD1	68	48.724	Equus_caballus
ENSXETG00000017895	exd1	68	53.383	ENSEEUG00000001232	EXD1	52	54.023	Erinaceus_europaeus
ENSXETG00000017895	exd1	91	40.437	ENSELUG00000006324	-	62	40.437	Esox_lucius
ENSXETG00000017895	exd1	95	48.363	ENSFCAG00000028533	EXD1	70	48.363	Felis_catus
ENSXETG00000017895	exd1	83	39.024	ENSGMOG00000015956	-	98	39.024	Gadus_morhua
ENSXETG00000017895	exd1	96	41.809	ENSGALG00000041449	EXD1	98	41.809	Gallus_gallus
ENSXETG00000017895	exd1	96	39.948	ENSGAFG00000017161	-	72	39.948	Gambusia_affinis
ENSXETG00000017895	exd1	96	49.250	ENSGAGG00000019200	EXD1	65	49.250	Gopherus_agassizii
ENSXETG00000017895	exd1	95	48.861	ENSGGOG00000004594	EXD1	68	49.367	Gorilla_gorilla
ENSXETG00000017895	exd1	65	45.312	ENSHBUG00000017880	-	72	42.561	Haplochromis_burtoni
ENSXETG00000017895	exd1	95	48.214	ENSHGLG00000015369	EXD1	68	48.214	Heterocephalus_glaber_female
ENSXETG00000017895	exd1	95	48.214	ENSHGLG00100007398	EXD1	70	48.214	Heterocephalus_glaber_male
ENSXETG00000017895	exd1	65	44.048	ENSIPUG00000003370	-	71	44.048	Ictalurus_punctatus
ENSXETG00000017895	exd1	95	47.848	ENSSTOG00000014980	EXD1	68	47.848	Ictidomys_tridecemlineatus
ENSXETG00000017895	exd1	97	42.408	ENSLBEG00000000022	-	74	36.446	Labrus_bergylta
ENSXETG00000017895	exd1	66	46.947	ENSLBEG00000010957	-	83	46.947	Labrus_bergylta
ENSXETG00000017895	exd1	96	43.766	ENSLACG00000006680	EXD1	67	42.857	Latimeria_chalumnae
ENSXETG00000017895	exd1	95	41.534	ENSLOCG00000012278	-	95	41.489	Lepisosteus_oculatus
ENSXETG00000017895	exd1	86	50.000	ENSLAFG00000014739	EXD1	69	50.970	Loxodonta_africana
ENSXETG00000017895	exd1	95	49.620	ENSMFAG00000034670	EXD1	68	49.620	Macaca_fascicularis
ENSXETG00000017895	exd1	95	49.620	ENSMMUG00000013991	EXD1	68	49.620	Macaca_mulatta
ENSXETG00000017895	exd1	95	49.620	ENSMNEG00000037333	EXD1	68	49.620	Macaca_nemestrina
ENSXETG00000017895	exd1	83	49.254	ENSMLEG00000033153	EXD1	99	49.254	Mandrillus_leucophaeus
ENSXETG00000017895	exd1	70	41.009	ENSMAMG00000006592	exd1	73	41.009	Mastacembelus_armatus
ENSXETG00000017895	exd1	97	39.378	ENSMZEG00005009193	-	75	39.378	Maylandia_zebra
ENSXETG00000017895	exd1	92	41.624	ENSMGAG00000011179	EXD1	97	41.624	Meleagris_gallopavo
ENSXETG00000017895	exd1	95	46.384	ENSMAUG00000002698	Exd1	69	46.384	Mesocricetus_auratus
ENSXETG00000017895	exd1	95	48.608	ENSMICG00000014337	EXD1	68	48.608	Microcebus_murinus
ENSXETG00000017895	exd1	97	46.305	ENSMOCG00000018151	Exd1	71	46.305	Microtus_ochrogaster
ENSXETG00000017895	exd1	95	48.744	ENSMODG00000000164	EXD1	75	48.744	Monodelphis_domestica
ENSXETG00000017895	exd1	97	39.211	ENSMALG00000015814	-	85	39.211	Monopterus_albus
ENSXETG00000017895	exd1	95	47.250	MGP_CAROLIEiJ_G0024145	Exd1	68	47.250	Mus_caroli
ENSXETG00000017895	exd1	95	47.208	ENSMUSG00000048647	Exd1	68	47.208	Mus_musculus
ENSXETG00000017895	exd1	95	43.147	MGP_PahariEiJ_G0025588	Exd1	67	43.147	Mus_pahari
ENSXETG00000017895	exd1	95	47.208	MGP_SPRETEiJ_G0025061	Exd1	68	47.208	Mus_spretus
ENSXETG00000017895	exd1	95	49.618	ENSMPUG00000008811	EXD1	68	49.618	Mustela_putorius_furo
ENSXETG00000017895	exd1	83	50.281	ENSMLUG00000001466	EXD1	66	51.381	Myotis_lucifugus
ENSXETG00000017895	exd1	95	47.487	ENSNGAG00000002319	Exd1	68	47.487	Nannospalax_galili
ENSXETG00000017895	exd1	70	46.014	ENSNBRG00000003229	-	73	47.080	Neolamprologus_brichardi
ENSXETG00000017895	exd1	95	47.739	ENSNLEG00000003456	EXD1	68	47.739	Nomascus_leucogenys
ENSXETG00000017895	exd1	96	38.400	ENSONIG00000012043	-	99	39.947	Oreochromis_niloticus
ENSXETG00000017895	exd1	56	35.316	ENSOANG00000029781	-	91	34.875	Ornithorhynchus_anatinus
ENSXETG00000017895	exd1	80	51.183	ENSOCUG00000013817	EXD1	67	52.226	Oryctolagus_cuniculus
ENSXETG00000017895	exd1	93	40.327	ENSORLG00000026344	-	73	40.327	Oryzias_latipes
ENSXETG00000017895	exd1	93	40.761	ENSORLG00020005465	-	73	40.761	Oryzias_latipes_hni
ENSXETG00000017895	exd1	96	39.895	ENSORLG00015004848	-	75	39.895	Oryzias_latipes_hsok
ENSXETG00000017895	exd1	93	40.000	ENSOMEG00000019812	-	74	39.578	Oryzias_melastigma
ENSXETG00000017895	exd1	75	49.831	ENSOGAG00000013095	EXD1	59	49.673	Otolemur_garnettii
ENSXETG00000017895	exd1	95	48.615	ENSOARG00000020330	EXD1	68	48.615	Ovis_aries
ENSXETG00000017895	exd1	95	49.114	ENSPPAG00000033760	EXD1	68	49.114	Pan_paniscus
ENSXETG00000017895	exd1	95	48.223	ENSPPRG00000011128	EXD1	70	48.223	Panthera_pardus
ENSXETG00000017895	exd1	95	48.223	ENSPTIG00000020026	EXD1	70	48.223	Panthera_tigris_altaica
ENSXETG00000017895	exd1	95	49.114	ENSPTRG00000006941	EXD1	68	49.114	Pan_troglodytes
ENSXETG00000017895	exd1	95	49.620	ENSPANG00000019000	EXD1	68	49.620	Papio_anubis
ENSXETG00000017895	exd1	95	40.323	ENSPKIG00000000671	-	75	35.431	Paramormyrops_kingsleyae
ENSXETG00000017895	exd1	96	47.118	ENSPSIG00000014473	EXD1	65	46.617	Pelodiscus_sinensis
ENSXETG00000017895	exd1	93	36.088	ENSPMGG00000015466	-	75	36.088	Periophthalmus_magnuspinnatus
ENSXETG00000017895	exd1	53	45.714	ENSPMAG00000000920	-	100	45.714	Petromyzon_marinus
ENSXETG00000017895	exd1	97	48.691	ENSPCIG00000027845	EXD1	80	48.157	Phascolarctos_cinereus
ENSXETG00000017895	exd1	96	38.107	ENSPFOG00000013673	-	97	38.107	Poecilia_formosa
ENSXETG00000017895	exd1	96	38.860	ENSPLAG00000014262	-	72	38.601	Poecilia_latipinna
ENSXETG00000017895	exd1	96	38.520	ENSPMEG00000012071	-	72	38.520	Poecilia_mexicana
ENSXETG00000017895	exd1	96	39.740	ENSPREG00000019468	-	72	39.740	Poecilia_reticulata
ENSXETG00000017895	exd1	68	59.023	ENSPPYG00000006369	EXD1	59	55.482	Pongo_abelii
ENSXETG00000017895	exd1	95	48.413	ENSPCOG00000026598	EXD1	64	51.786	Propithecus_coquereli
ENSXETG00000017895	exd1	68	59.023	ENSPVAG00000003149	EXD1	63	53.628	Pteropus_vampyrus
ENSXETG00000017895	exd1	98	39.948	ENSPNAG00000008931	exd1	78	39.948	Pygocentrus_nattereri
ENSXETG00000017895	exd1	95	46.500	ENSRNOG00000025360	Exd1	69	46.500	Rattus_norvegicus
ENSXETG00000017895	exd1	83	49.425	ENSRBIG00000037257	EXD1	99	49.425	Rhinopithecus_bieti
ENSXETG00000017895	exd1	95	49.114	ENSRROG00000034491	EXD1	68	49.114	Rhinopithecus_roxellana
ENSXETG00000017895	exd1	95	42.025	ENSSBOG00000024842	EXD1	65	42.025	Saimiri_boliviensis_boliviensis
ENSXETG00000017895	exd1	95	48.990	ENSSHAG00000016701	EXD1	73	48.990	Sarcophilus_harrisii
ENSXETG00000017895	exd1	52	47.264	ENSSFOG00015016852	-	59	47.264	Scleropages_formosus
ENSXETG00000017895	exd1	66	43.726	ENSSMAG00000005451	-	53	43.893	Scophthalmus_maximus
ENSXETG00000017895	exd1	95	41.398	ENSSDUG00000004368	exd1	65	40.483	Seriola_dumerili
ENSXETG00000017895	exd1	66	45.914	ENSSLDG00000021803	-	55	46.124	Seriola_lalandi_dorsalis
ENSXETG00000017895	exd1	68	58.271	ENSSARG00000009556	-	51	59.387	Sorex_araneus
ENSXETG00000017895	exd1	96	47.872	ENSSPUG00000001716	EXD1	62	47.872	Sphenodon_punctatus
ENSXETG00000017895	exd1	53	48.058	ENSSPAG00000023228	-	65	48.341	Stegastes_partitus
ENSXETG00000017895	exd1	95	50.000	ENSSSCG00000004752	EXD1	69	50.000	Sus_scrofa
ENSXETG00000017895	exd1	96	36.951	ENSTNIG00000017431	-	96	36.951	Tetraodon_nigroviridis
ENSXETG00000017895	exd1	62	47.718	ENSTBEG00000003085	EXD1	57	48.117	Tupaia_belangeri
ENSXETG00000017895	exd1	75	54.762	ENSTTRG00000009809	EXD1	59	54.934	Tursiops_truncatus
ENSXETG00000017895	exd1	95	49.873	ENSUMAG00000012170	EXD1	68	49.873	Ursus_maritimus
ENSXETG00000017895	exd1	75	54.422	ENSVPAG00000007758	EXD1	51	59.004	Vicugna_pacos
ENSXETG00000017895	exd1	95	49.873	ENSVVUG00000026704	EXD1	68	49.873	Vulpes_vulpes
ENSXETG00000017895	exd1	79	41.935	ENSXCOG00000010879	-	84	41.935	Xiphophorus_couchianus
ENSXETG00000017895	exd1	80	42.547	ENSXMAG00000014462	-	86	41.853	Xiphophorus_maculatus