EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000017946 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 32884 bases
Position: chrGL173644.1:283-33166
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000060395	Suf	PF05843.14	1.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000064482	-	1455	-	ENSXETP00000060395	484 (aa)	-	F6VDL5

Gene Model

Click here to download ENSXETG00000017946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000017946's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000017946	-	99	43.685	ENSG00000176102	CSTF3	87	96.226	Homo_sapiens
ENSXETG00000017946	-	99	42.324	ENSAPOG00000014054	cstf3	66	42.324	Acanthochromis_polyacanthus
ENSXETG00000017946	-	99	43.802	ENSAMEG00000007187	CSTF3	66	43.802	Ailuropoda_melanoleuca
ENSXETG00000017946	-	99	42.324	ENSAOCG00000010930	cstf3	66	42.324	Amphiprion_ocellaris
ENSXETG00000017946	-	99	42.324	ENSAPEG00000007903	cstf3	66	42.324	Amphiprion_percula
ENSXETG00000017946	-	99	42.116	ENSATEG00000000190	cstf3	66	42.116	Anabas_testudineus
ENSXETG00000017946	-	99	43.776	ENSAPLG00000007217	CSTF3	67	43.776	Anas_platyrhynchos
ENSXETG00000017946	-	99	43.892	ENSACAG00000002823	CSTF3	66	43.892	Anolis_carolinensis
ENSXETG00000017946	-	99	43.685	ENSANAG00000020699	CSTF3	96	40.087	Aotus_nancymaae
ENSXETG00000017946	-	99	41.962	ENSACLG00000007820	cstf3	66	42.324	Astatotilapia_calliptera
ENSXETG00000017946	-	100	42.593	ENSAMXG00000014198	cstf3	67	42.593	Astyanax_mexicanus
ENSXETG00000017946	-	99	43.595	ENSBTAG00000008617	CSTF3	66	43.595	Bos_taurus
ENSXETG00000017946	-	99	43.595	ENSCJAG00000005533	CSTF3	66	43.595	Callithrix_jacchus
ENSXETG00000017946	-	100	43.621	ENSCAFG00000007264	CSTF3	67	43.621	Canis_familiaris
ENSXETG00000017946	-	99	43.685	ENSCAFG00020002715	CSTF3	66	43.685	Canis_lupus_dingo
ENSXETG00000017946	-	98	42.558	ENSCHIG00000016418	CSTF3	66	42.558	Capra_hircus
ENSXETG00000017946	-	99	43.685	ENSTSYG00000000451	CSTF3	99	40.741	Carlito_syrichta
ENSXETG00000017946	-	88	35.499	ENSCAPG00000010958	CSTF3	70	35.499	Cavia_aperea
ENSXETG00000017946	-	100	43.416	ENSCPOG00000005545	CSTF3	67	43.416	Cavia_porcellus
ENSXETG00000017946	-	99	43.685	ENSCCAG00000024790	CSTF3	96	40.741	Cebus_capucinus
ENSXETG00000017946	-	99	43.595	ENSCATG00000007080	CSTF3	66	43.595	Cercocebus_atys
ENSXETG00000017946	-	99	43.595	ENSCLAG00000016179	CSTF3	66	43.595	Chinchilla_lanigera
ENSXETG00000017946	-	99	43.685	ENSCPBG00000006753	CSTF3	66	43.685	Chrysemys_picta_bellii
ENSXETG00000017946	-	99	31.884	ENSCING00000006401	-	65	31.884	Ciona_intestinalis
ENSXETG00000017946	-	99	31.677	ENSCSAVG00000004851	-	66	31.677	Ciona_savignyi
ENSXETG00000017946	-	99	43.595	ENSCANG00000035468	CSTF3	66	43.595	Colobus_angolensis_palliatus
ENSXETG00000017946	-	100	43.621	ENSCGRG00001014773	Cstf3	67	43.621	Cricetulus_griseus_chok1gshd
ENSXETG00000017946	-	100	43.621	ENSCGRG00000004142	Cstf3	67	43.621	Cricetulus_griseus_crigri
ENSXETG00000017946	-	99	42.443	ENSCSEG00000014283	cstf3	66	42.443	Cynoglossus_semilaevis
ENSXETG00000017946	-	99	42.116	ENSCVAG00000019739	cstf3	66	42.116	Cyprinodon_variegatus
ENSXETG00000017946	-	99	42.474	ENSDARG00000018904	cstf3	66	42.474	Danio_rerio
ENSXETG00000017946	-	99	43.685	ENSDNOG00000007366	CSTF3	66	43.685	Dasypus_novemcinctus
ENSXETG00000017946	-	99	42.324	ENSDORG00000005898	Cstf3	64	42.324	Dipodomys_ordii
ENSXETG00000017946	-	99	31.042	FBgn0003559	su(f)	64	31.042	Drosophila_melanogaster
ENSXETG00000017946	-	96	34.979	ENSEBUG00000015459	cstf3	73	34.979	Eptatretus_burgeri
ENSXETG00000017946	-	99	43.093	ENSEASG00005019884	CSTF3	97	40.781	Equus_asinus_asinus
ENSXETG00000017946	-	99	43.093	ENSECAG00000023338	CSTF3	97	40.781	Equus_caballus
ENSXETG00000017946	-	99	42.149	ENSEEUG00000015167	CSTF3	66	42.149	Erinaceus_europaeus
ENSXETG00000017946	-	99	42.236	ENSELUG00000023393	cstf3	66	42.236	Esox_lucius
ENSXETG00000017946	-	100	43.621	ENSFCAG00000030711	CSTF3	67	43.621	Felis_catus
ENSXETG00000017946	-	99	43.478	ENSFALG00000010764	CSTF3	66	43.478	Ficedula_albicollis
ENSXETG00000017946	-	99	43.595	ENSFDAG00000012082	CSTF3	66	43.595	Fukomys_damarensis
ENSXETG00000017946	-	99	42.116	ENSFHEG00000020623	cstf3	66	42.116	Fundulus_heteroclitus
ENSXETG00000017946	-	99	41.909	ENSGMOG00000012275	cstf3	66	41.909	Gadus_morhua
ENSXETG00000017946	-	99	43.595	ENSGALG00000011685	CSTF3	66	43.595	Gallus_gallus
ENSXETG00000017946	-	99	42.116	ENSGAFG00000002181	cstf3	66	42.116	Gambusia_affinis
ENSXETG00000017946	-	99	42.324	ENSGACG00000015997	cstf3	66	42.324	Gasterosteus_aculeatus
ENSXETG00000017946	-	99	43.685	ENSGAGG00000006200	CSTF3	66	43.685	Gopherus_agassizii
ENSXETG00000017946	-	94	39.434	ENSGGOG00000026591	CSTF3	96	39.434	Gorilla_gorilla
ENSXETG00000017946	-	99	41.962	ENSHBUG00000016656	cstf3	66	42.324	Haplochromis_burtoni
ENSXETG00000017946	-	99	43.595	ENSHGLG00000017834	CSTF3	66	43.595	Heterocephalus_glaber_female
ENSXETG00000017946	-	99	43.685	ENSHGLG00100018042	CSTF3	66	43.685	Heterocephalus_glaber_male
ENSXETG00000017946	-	99	41.250	ENSHCOG00000015218	cstf3	66	41.494	Hippocampus_comes
ENSXETG00000017946	-	100	41.770	ENSIPUG00000013170	CSTF3	67	41.909	Ictalurus_punctatus
ENSXETG00000017946	-	99	43.595	ENSSTOG00000013306	CSTF3	66	43.595	Ictidomys_tridecemlineatus
ENSXETG00000017946	-	99	42.708	ENSJJAG00000018430	Cstf3	72	42.708	Jaculus_jaculus
ENSXETG00000017946	-	99	41.701	ENSKMAG00000010916	cstf3	70	40.213	Kryptolebias_marmoratus
ENSXETG00000017946	-	100	41.975	ENSLBEG00000002306	cstf3	67	41.975	Labrus_bergylta
ENSXETG00000017946	-	99	43.093	ENSLACG00000017296	CSTF3	67	43.093	Latimeria_chalumnae
ENSXETG00000017946	-	99	42.443	ENSLOCG00000004415	cstf3	66	42.443	Lepisosteus_oculatus
ENSXETG00000017946	-	99	43.595	ENSLAFG00000008712	CSTF3	66	43.595	Loxodonta_africana
ENSXETG00000017946	-	99	43.595	ENSMFAG00000029516	CSTF3	95	40.305	Macaca_fascicularis
ENSXETG00000017946	-	99	43.595	ENSMMUG00000002542	CSTF3	66	43.595	Macaca_mulatta
ENSXETG00000017946	-	99	43.595	ENSMNEG00000021807	CSTF3	66	43.595	Macaca_nemestrina
ENSXETG00000017946	-	99	43.595	ENSMLEG00000039594	CSTF3	97	40.305	Mandrillus_leucophaeus
ENSXETG00000017946	-	99	42.531	ENSMAMG00000020423	cstf3	66	42.531	Mastacembelus_armatus
ENSXETG00000017946	-	99	41.962	ENSMZEG00005012082	cstf3	66	42.324	Maylandia_zebra
ENSXETG00000017946	-	99	43.776	ENSMGAG00000001383	CSTF3	66	43.776	Meleagris_gallopavo
ENSXETG00000017946	-	99	43.802	ENSMAUG00000002487	Cstf3	66	43.802	Mesocricetus_auratus
ENSXETG00000017946	-	99	43.595	ENSMICG00000004784	CSTF3	66	43.595	Microcebus_murinus
ENSXETG00000017946	-	99	43.595	ENSMOCG00000017583	Cstf3	66	43.595	Microtus_ochrogaster
ENSXETG00000017946	-	99	42.116	ENSMMOG00000016026	cstf3	63	42.116	Mola_mola
ENSXETG00000017946	-	100	43.416	ENSMODG00000009745	-	67	43.416	Monodelphis_domestica
ENSXETG00000017946	-	99	39.501	ENSMODG00000025205	-	66	39.501	Monodelphis_domestica
ENSXETG00000017946	-	99	42.324	ENSMALG00000012050	cstf3	66	42.324	Monopterus_albus
ENSXETG00000017946	-	99	43.595	MGP_CAROLIEiJ_G0024026	Cstf3	66	43.595	Mus_caroli
ENSXETG00000017946	-	99	43.595	ENSMUSG00000027176	Cstf3	66	43.595	Mus_musculus
ENSXETG00000017946	-	99	43.595	MGP_PahariEiJ_G0025464	Cstf3	66	43.595	Mus_pahari
ENSXETG00000017946	-	99	43.595	MGP_SPRETEiJ_G0024939	Cstf3	66	43.595	Mus_spretus
ENSXETG00000017946	-	100	43.621	ENSMPUG00000011457	CSTF3	67	43.621	Mustela_putorius_furo
ENSXETG00000017946	-	99	43.685	ENSMLUG00000003073	-	66	43.685	Myotis_lucifugus
ENSXETG00000017946	-	100	42.387	ENSMLUG00000026022	-	67	42.387	Myotis_lucifugus
ENSXETG00000017946	-	99	43.776	ENSNGAG00000010677	Cstf3	66	43.776	Nannospalax_galili
ENSXETG00000017946	-	82	34.509	ENSNBRG00000007345	cstf3	63	34.509	Neolamprologus_brichardi
ENSXETG00000017946	-	99	43.595	ENSNLEG00000017901	CSTF3	97	40.087	Nomascus_leucogenys
ENSXETG00000017946	-	79	31.250	ENSMEUG00000005640	-	72	31.250	Notamacropus_eugenii
ENSXETG00000017946	-	99	43.595	ENSODEG00000016737	-	66	43.595	Octodon_degus
ENSXETG00000017946	-	84	86.842	ENSODEG00000006311	-	59	86.842	Octodon_degus
ENSXETG00000017946	-	99	41.962	ENSONIG00000005563	cstf3	66	42.324	Oreochromis_niloticus
ENSXETG00000017946	-	87	34.670	ENSOANG00000015140	CSTF3	64	34.670	Ornithorhynchus_anatinus
ENSXETG00000017946	-	99	43.595	ENSOCUG00000015417	CSTF3	66	43.595	Oryctolagus_cuniculus
ENSXETG00000017946	-	99	41.250	ENSORLG00000009762	cstf3	66	41.250	Oryzias_latipes
ENSXETG00000017946	-	99	41.250	ENSORLG00020005540	cstf3	66	41.250	Oryzias_latipes_hni
ENSXETG00000017946	-	99	41.250	ENSORLG00015003551	cstf3	66	41.250	Oryzias_latipes_hsok
ENSXETG00000017946	-	99	41.458	ENSOMEG00000003848	cstf3	66	41.458	Oryzias_melastigma
ENSXETG00000017946	-	100	43.149	ENSOGAG00000010229	CSTF3	67	43.149	Otolemur_garnettii
ENSXETG00000017946	-	84	35.294	ENSOARG00000017271	CSTF3	62	35.294	Ovis_aries
ENSXETG00000017946	-	99	42.443	ENSPPAG00000027358	CSTF3	66	42.443	Pan_paniscus
ENSXETG00000017946	-	100	43.621	ENSPPRG00000016852	CSTF3	67	43.621	Panthera_pardus
ENSXETG00000017946	-	100	43.621	ENSPTIG00000008716	CSTF3	67	43.621	Panthera_tigris_altaica
ENSXETG00000017946	-	99	43.595	ENSPTRG00000003485	CSTF3	66	43.595	Pan_troglodytes
ENSXETG00000017946	-	99	43.595	ENSPANG00000013722	CSTF3	97	40.305	Papio_anubis
ENSXETG00000017946	-	100	42.798	ENSPKIG00000023648	cstf3	67	42.798	Paramormyrops_kingsleyae
ENSXETG00000017946	-	99	43.685	ENSPSIG00000009173	CSTF3	66	43.685	Pelodiscus_sinensis
ENSXETG00000017946	-	100	41.564	ENSPMGG00000000164	cstf3	87	41.564	Periophthalmus_magnuspinnatus
ENSXETG00000017946	-	99	43.595	ENSPEMG00000011481	Cstf3	66	43.595	Peromyscus_maniculatus_bairdii
ENSXETG00000017946	-	99	38.716	ENSPMAG00000007282	cstf3	67	38.525	Petromyzon_marinus
ENSXETG00000017946	-	99	38.636	ENSPCIG00000030419	-	60	38.636	Phascolarctos_cinereus
ENSXETG00000017946	-	96	40.860	ENSPCIG00000026406	-	66	39.024	Phascolarctos_cinereus
ENSXETG00000017946	-	99	42.116	ENSPFOG00000017239	cstf3	66	42.116	Poecilia_formosa
ENSXETG00000017946	-	99	42.116	ENSPLAG00000009456	cstf3	66	42.116	Poecilia_latipinna
ENSXETG00000017946	-	99	42.116	ENSPMEG00000010320	cstf3	66	42.116	Poecilia_mexicana
ENSXETG00000017946	-	99	42.116	ENSPREG00000013549	cstf3	66	42.116	Poecilia_reticulata
ENSXETG00000017946	-	99	43.595	ENSPPYG00000003375	CSTF3	66	43.595	Pongo_abelii
ENSXETG00000017946	-	99	41.909	ENSPCOG00000014417	CSTF3	64	41.822	Propithecus_coquereli
ENSXETG00000017946	-	99	42.975	ENSPVAG00000002350	CSTF3	66	42.975	Pteropus_vampyrus
ENSXETG00000017946	-	99	41.962	ENSPNYG00000018259	cstf3	66	42.324	Pundamilia_nyererei
ENSXETG00000017946	-	99	43.093	ENSPNAG00000020182	cstf3	66	43.093	Pygocentrus_nattereri
ENSXETG00000017946	-	82	35.768	ENSRNOG00000012089	Cstf3	56	52.532	Rattus_norvegicus
ENSXETG00000017946	-	99	43.271	ENSRBIG00000044258	CSTF3	66	43.271	Rhinopithecus_bieti
ENSXETG00000017946	-	99	43.595	ENSRROG00000043450	CSTF3	66	43.595	Rhinopithecus_roxellana
ENSXETG00000017946	-	99	43.595	ENSSBOG00000024764	CSTF3	98	40.741	Saimiri_boliviensis_boliviensis
ENSXETG00000017946	-	99	41.788	ENSSHAG00000003135	-	66	41.788	Sarcophilus_harrisii
ENSXETG00000017946	-	99	43.685	ENSSHAG00000018128	-	66	43.685	Sarcophilus_harrisii
ENSXETG00000017946	-	99	42.236	ENSSFOG00015022133	cstf3	66	42.236	Scleropages_formosus
ENSXETG00000017946	-	99	42.116	ENSSMAG00000002197	cstf3	72	42.116	Scophthalmus_maximus
ENSXETG00000017946	-	99	42.324	ENSSDUG00000020426	cstf3	66	42.324	Seriola_dumerili
ENSXETG00000017946	-	99	42.324	ENSSLDG00000025649	cstf3	66	42.324	Seriola_lalandi_dorsalis
ENSXETG00000017946	-	99	43.595	ENSSARG00000000391	CSTF3	66	43.595	Sorex_araneus
ENSXETG00000017946	-	96	41.720	ENSSPUG00000010546	CSTF3	66	41.720	Sphenodon_punctatus
ENSXETG00000017946	-	99	42.324	ENSSPAG00000004958	cstf3	66	42.324	Stegastes_partitus
ENSXETG00000017946	-	100	43.621	ENSSSCG00000040954	CSTF3	67	43.621	Sus_scrofa
ENSXETG00000017946	-	99	43.659	ENSTGUG00000005010	CSTF3	67	43.659	Taeniopygia_guttata
ENSXETG00000017946	-	99	42.116	ENSTRUG00000004959	cstf3	66	42.116	Takifugu_rubripes
ENSXETG00000017946	-	99	42.116	ENSTNIG00000013811	cstf3	66	42.116	Tetraodon_nigroviridis
ENSXETG00000017946	-	84	35.294	ENSTBEG00000001544	CSTF3	56	35.294	Tupaia_belangeri
ENSXETG00000017946	-	99	41.942	ENSTTRG00000016366	CSTF3	66	41.942	Tursiops_truncatus
ENSXETG00000017946	-	99	43.478	ENSUMAG00000018971	CSTF3	81	43.478	Ursus_maritimus
ENSXETG00000017946	-	99	43.595	ENSVPAG00000007800	CSTF3	66	43.595	Vicugna_pacos
ENSXETG00000017946	-	99	43.685	ENSVVUG00000014938	CSTF3	69	43.064	Vulpes_vulpes
ENSXETG00000017946	-	82	34.761	ENSXCOG00000011741	cstf3	63	34.761	Xiphophorus_couchianus
ENSXETG00000017946	-	99	42.116	ENSXMAG00000009545	cstf3	66	42.116	Xiphophorus_maculatus