EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000018101 (Gene tree)
Gene ID: -
Gene Symbol: polr3a
Alias: -
Full Name: Xenopus tropicalis polymerase (RNA) III (DNA directed) polypeptide A%2C 155kDa (polr3a)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 73062 bases
Position: chrGL172901.1:1254422-1327483
Accession: NM_001102708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000039295	RNA_pol_Rpb1_5	PF04998.17	3.9e-62	1	1
ENSXETP00000039295	RNA_pol_Rpb1_4	PF05000.17	8.7e-32	1	1
ENSXETP00000039295	RNA_pol_Rpb1_2	PF00623.20	2.2e-74	1	1
ENSXETP00000039295	RNA_pol_Rpb1_3	PF04983.18	9.5e-41	1	1
ENSXETP00000039295	RNA_pol_Rpb1_1	PF04997.12	7.2e-94	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000039295	-	5174	-	ENSXETP00000039295	1197 (aa)	-	F7AYG7

Gene Model

Click here to download ENSXETG00000018101's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000018101's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000018101	polr3a	85	39.886	ENSXETG00000012465	polr2a	51	40.116
ENSXETG00000018101	polr3a	74	32.814	ENSXETG00000001952	polr1a	71	32.193

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000018101	polr3a	100	92.398	ENSG00000148606	POLR3A	95	93.158	Homo_sapiens
ENSXETG00000018101	polr3a	72	86.395	ENSAPOG00000022727	polr3a	99	86.395	Acanthochromis_polyacanthus
ENSXETG00000018101	polr3a	100	92.250	ENSAMEG00000017801	POLR3A	86	92.250	Ailuropoda_melanoleuca
ENSXETG00000018101	polr3a	100	90.560	ENSACIG00000024504	polr3a	89	90.560	Amphilophus_citrinellus
ENSXETG00000018101	polr3a	100	90.476	ENSAOCG00000002071	polr3a	86	90.476	Amphiprion_ocellaris
ENSXETG00000018101	polr3a	100	87.302	ENSAOCG00000003949	-	86	87.302	Amphiprion_ocellaris
ENSXETG00000018101	polr3a	100	90.393	ENSAPEG00000001966	-	86	90.393	Amphiprion_percula
ENSXETG00000018101	polr3a	100	90.476	ENSAPEG00000013351	polr3a	86	90.476	Amphiprion_percula
ENSXETG00000018101	polr3a	100	90.393	ENSATEG00000023277	polr3a	86	90.393	Anabas_testudineus
ENSXETG00000018101	polr3a	99	93.068	ENSAPLG00000015878	POLR3A	85	93.068	Anas_platyrhynchos
ENSXETG00000018101	polr3a	100	90.736	ENSACAG00000007985	POLR3A	92	90.736	Anolis_carolinensis
ENSXETG00000018101	polr3a	100	89.408	ENSANAG00000028922	POLR3A	86	89.408	Aotus_nancymaae
ENSXETG00000018101	polr3a	100	90.058	ENSACLG00000005914	polr3a	89	89.151	Astatotilapia_calliptera
ENSXETG00000018101	polr3a	100	86.967	ENSAMXG00000018852	polr3a	86	86.967	Astyanax_mexicanus
ENSXETG00000018101	polr3a	100	92.314	ENSBTAG00000013259	POLR3A	86	92.314	Bos_taurus
ENSXETG00000018101	polr3a	99	56.768	WBGene00004411	rpc-1	86	56.768	Caenorhabditis_elegans
ENSXETG00000018101	polr3a	100	92.231	ENSCJAG00000001015	POLR3A	86	92.231	Callithrix_jacchus
ENSXETG00000018101	polr3a	100	92.314	ENSCAFG00000015546	POLR3A	86	92.314	Canis_familiaris
ENSXETG00000018101	polr3a	100	92.314	ENSCAFG00020014711	POLR3A	86	92.314	Canis_lupus_dingo
ENSXETG00000018101	polr3a	100	92.147	ENSCHIG00000000352	POLR3A	86	92.147	Capra_hircus
ENSXETG00000018101	polr3a	100	91.896	ENSTSYG00000006671	POLR3A	86	91.896	Carlito_syrichta
ENSXETG00000018101	polr3a	99	92.054	ENSCAPG00000016031	POLR3A	86	92.054	Cavia_aperea
ENSXETG00000018101	polr3a	100	91.980	ENSCPOG00000022387	POLR3A	86	91.980	Cavia_porcellus
ENSXETG00000018101	polr3a	100	89.975	ENSCCAG00000032995	POLR3A	86	89.975	Cebus_capucinus
ENSXETG00000018101	polr3a	100	92.398	ENSCATG00000035842	POLR3A	86	92.398	Cercocebus_atys
ENSXETG00000018101	polr3a	100	91.646	ENSCLAG00000009629	POLR3A	86	91.646	Chinchilla_lanigera
ENSXETG00000018101	polr3a	100	92.398	ENSCSAG00000009292	POLR3A	86	92.398	Chlorocebus_sabaeus
ENSXETG00000018101	polr3a	94	84.524	ENSCHOG00000008368	POLR3A	95	84.524	Choloepus_hoffmanni
ENSXETG00000018101	polr3a	100	92.481	ENSCPBG00000002079	POLR3A	86	92.481	Chrysemys_picta_bellii
ENSXETG00000018101	polr3a	100	68.865	ENSCSAVG00000009925	-	86	68.865	Ciona_savignyi
ENSXETG00000018101	polr3a	85	88.060	ENSCANG00000041071	POLR3A	83	88.060	Colobus_angolensis_palliatus
ENSXETG00000018101	polr3a	82	92.250	ENSCGRG00001015599	-	84	92.250	Cricetulus_griseus_chok1gshd
ENSXETG00000018101	polr3a	90	92.727	ENSCGRG00000001019	Polr3a	92	92.727	Cricetulus_griseus_crigri
ENSXETG00000018101	polr3a	100	90.393	ENSCSEG00000016653	polr3a	86	90.393	Cynoglossus_semilaevis
ENSXETG00000018101	polr3a	100	89.891	ENSCVAG00000023049	polr3a	86	89.891	Cyprinodon_variegatus
ENSXETG00000018101	polr3a	100	89.724	ENSDARG00000102569	polr3a	86	89.724	Danio_rerio
ENSXETG00000018101	polr3a	100	91.479	ENSDNOG00000010194	POLR3A	86	91.479	Dasypus_novemcinctus
ENSXETG00000018101	polr3a	100	92.314	ENSDORG00000000184	Polr3a	86	92.314	Dipodomys_ordii
ENSXETG00000018101	polr3a	99	57.131	FBgn0030687	CG17209	85	57.131	Drosophila_melanogaster
ENSXETG00000018101	polr3a	86	92.727	ENSETEG00000007477	POLR3A	75	92.727	Echinops_telfairi
ENSXETG00000018101	polr3a	69	76.230	ENSEBUG00000013761	polr3a	98	76.230	Eptatretus_burgeri
ENSXETG00000018101	polr3a	100	92.565	ENSEASG00005023053	POLR3A	86	92.565	Equus_asinus_asinus
ENSXETG00000018101	polr3a	100	92.314	ENSECAG00000019416	POLR3A	89	92.314	Equus_caballus
ENSXETG00000018101	polr3a	100	90.142	ENSEEUG00000001774	POLR3A	89	90.142	Erinaceus_europaeus
ENSXETG00000018101	polr3a	100	87.333	ENSELUG00000014016	polr3a	86	87.333	Esox_lucius
ENSXETG00000018101	polr3a	100	92.481	ENSFCAG00000000843	POLR3A	86	92.481	Felis_catus
ENSXETG00000018101	polr3a	100	92.988	ENSFALG00000006913	POLR3A	86	92.988	Ficedula_albicollis
ENSXETG00000018101	polr3a	100	91.896	ENSFDAG00000007813	POLR3A	86	91.896	Fukomys_damarensis
ENSXETG00000018101	polr3a	94	91.549	ENSFHEG00000011922	polr3a	84	91.549	Fundulus_heteroclitus
ENSXETG00000018101	polr3a	100	84.918	ENSGMOG00000000291	polr3a	86	84.918	Gadus_morhua
ENSXETG00000018101	polr3a	100	92.982	ENSGALG00000004947	POLR3A	86	92.982	Gallus_gallus
ENSXETG00000018101	polr3a	100	90.476	ENSGAFG00000005112	polr3a	86	90.476	Gambusia_affinis
ENSXETG00000018101	polr3a	100	89.223	ENSGACG00000002304	polr3a	86	89.223	Gasterosteus_aculeatus
ENSXETG00000018101	polr3a	98	92.184	ENSGAGG00000010386	POLR3A	88	92.184	Gopherus_agassizii
ENSXETG00000018101	polr3a	99	91.275	ENSGGOG00000027729	POLR3A	84	94.100	Gorilla_gorilla
ENSXETG00000018101	polr3a	100	90.142	ENSHBUG00000018098	polr3a	86	90.142	Haplochromis_burtoni
ENSXETG00000018101	polr3a	100	91.813	ENSHGLG00000017899	POLR3A	88	91.813	Heterocephalus_glaber_female
ENSXETG00000018101	polr3a	100	91.813	ENSHGLG00100008483	POLR3A	88	91.813	Heterocephalus_glaber_male
ENSXETG00000018101	polr3a	100	89.307	ENSHCOG00000001075	polr3a	86	89.307	Hippocampus_comes
ENSXETG00000018101	polr3a	53	85.827	ENSIPUG00000001706	polr3a	96	85.827	Ictalurus_punctatus
ENSXETG00000018101	polr3a	100	92.231	ENSSTOG00000012983	POLR3A	86	92.231	Ictidomys_tridecemlineatus
ENSXETG00000018101	polr3a	53	82.205	ENSJJAG00000016217	-	98	82.205	Jaculus_jaculus
ENSXETG00000018101	polr3a	100	90.142	ENSKMAG00000015290	polr3a	86	90.142	Kryptolebias_marmoratus
ENSXETG00000018101	polr3a	100	88.304	ENSLBEG00000017214	polr3a	86	88.304	Labrus_bergylta
ENSXETG00000018101	polr3a	100	87.500	ENSLACG00000018557	POLR3A	88	87.500	Latimeria_chalumnae
ENSXETG00000018101	polr3a	100	90.750	ENSLOCG00000004942	polr3a	86	90.750	Lepisosteus_oculatus
ENSXETG00000018101	polr3a	100	92.231	ENSLAFG00000016719	POLR3A	86	92.231	Loxodonta_africana
ENSXETG00000018101	polr3a	100	92.314	ENSMFAG00000032218	POLR3A	86	92.314	Macaca_fascicularis
ENSXETG00000018101	polr3a	100	92.314	ENSMMUG00000005514	POLR3A	86	92.314	Macaca_mulatta
ENSXETG00000018101	polr3a	94	92.171	ENSMNEG00000035163	POLR3A	99	92.171	Macaca_nemestrina
ENSXETG00000018101	polr3a	100	87.803	ENSMLEG00000030014	POLR3A	86	87.803	Mandrillus_leucophaeus
ENSXETG00000018101	polr3a	100	89.975	ENSMAMG00000017497	polr3a	86	89.975	Mastacembelus_armatus
ENSXETG00000018101	polr3a	100	90.058	ENSMZEG00005000576	polr3a	86	90.058	Maylandia_zebra
ENSXETG00000018101	polr3a	100	72.016	ENSMGAG00000005713	-	86	72.016	Meleagris_gallopavo
ENSXETG00000018101	polr3a	100	89.808	ENSMAUG00000016247	Polr3a	86	89.808	Mesocricetus_auratus
ENSXETG00000018101	polr3a	100	92.398	ENSMICG00000005937	POLR3A	86	92.398	Microcebus_murinus
ENSXETG00000018101	polr3a	100	92.063	ENSMOCG00000012185	Polr3a	86	92.063	Microtus_ochrogaster
ENSXETG00000018101	polr3a	100	89.056	ENSMMOG00000013822	polr3a	86	89.056	Mola_mola
ENSXETG00000018101	polr3a	100	92.481	ENSMODG00000001036	POLR3A	86	92.481	Monodelphis_domestica
ENSXETG00000018101	polr3a	100	89.140	ENSMALG00000001249	polr3a	86	89.140	Monopterus_albus
ENSXETG00000018101	polr3a	100	92.314	MGP_CAROLIEiJ_G0019016	Polr3a	86	92.314	Mus_caroli
ENSXETG00000018101	polr3a	100	92.314	ENSMUSG00000025280	Polr3a	99	90.187	Mus_musculus
ENSXETG00000018101	polr3a	100	92.231	MGP_PahariEiJ_G0030029	Polr3a	86	92.231	Mus_pahari
ENSXETG00000018101	polr3a	100	89.307	MGP_SPRETEiJ_G0019894	Polr3a	87	97.030	Mus_spretus
ENSXETG00000018101	polr3a	100	91.398	ENSMPUG00000003790	POLR3A	86	91.398	Mustela_putorius_furo
ENSXETG00000018101	polr3a	100	91.228	ENSMLUG00000011522	POLR3A	86	91.228	Myotis_lucifugus
ENSXETG00000018101	polr3a	100	90.058	ENSNGAG00000015863	Polr3a	86	90.058	Nannospalax_galili
ENSXETG00000018101	polr3a	100	88.471	ENSNBRG00000014262	polr3a	86	88.471	Neolamprologus_brichardi
ENSXETG00000018101	polr3a	85	90.299	ENSNLEG00000010501	POLR3A	80	90.299	Nomascus_leucogenys
ENSXETG00000018101	polr3a	99	78.107	ENSMEUG00000012446	POLR3A	86	78.107	Notamacropus_eugenii
ENSXETG00000018101	polr3a	100	87.135	ENSOPRG00000001880	-	86	87.135	Ochotona_princeps
ENSXETG00000018101	polr3a	100	91.228	ENSODEG00000015146	POLR3A	86	91.228	Octodon_degus
ENSXETG00000018101	polr3a	100	90.476	ENSONIG00000016129	polr3a	86	90.476	Oreochromis_niloticus
ENSXETG00000018101	polr3a	98	92.014	ENSOANG00000007013	POLR3A	86	92.014	Ornithorhynchus_anatinus
ENSXETG00000018101	polr3a	100	92.147	ENSOCUG00000012450	POLR3A	86	92.147	Oryctolagus_cuniculus
ENSXETG00000018101	polr3a	100	90.142	ENSORLG00000008958	polr3a	86	90.142	Oryzias_latipes
ENSXETG00000018101	polr3a	100	90.226	ENSORLG00020007525	polr3a	88	90.226	Oryzias_latipes_hni
ENSXETG00000018101	polr3a	100	90.142	ENSORLG00015006633	polr3a	86	90.142	Oryzias_latipes_hsok
ENSXETG00000018101	polr3a	100	88.972	ENSOMEG00000012865	polr3a	86	88.972	Oryzias_melastigma
ENSXETG00000018101	polr3a	100	92.398	ENSOGAG00000010995	POLR3A	86	92.398	Otolemur_garnettii
ENSXETG00000018101	polr3a	100	92.077	ENSOARG00000009656	POLR3A	86	92.077	Ovis_aries
ENSXETG00000018101	polr3a	53	89.202	ENSPPAG00000041726	-	99	89.202	Pan_paniscus
ENSXETG00000018101	polr3a	100	92.481	ENSPPRG00000002128	POLR3A	86	92.481	Panthera_pardus
ENSXETG00000018101	polr3a	100	92.481	ENSPTIG00000020916	POLR3A	86	92.481	Panthera_tigris_altaica
ENSXETG00000018101	polr3a	100	92.481	ENSPTRG00000002664	POLR3A	86	92.481	Pan_troglodytes
ENSXETG00000018101	polr3a	100	92.231	ENSPANG00000022508	POLR3A	86	92.231	Papio_anubis
ENSXETG00000018101	polr3a	100	90.977	ENSPKIG00000008140	polr3a	86	90.977	Paramormyrops_kingsleyae
ENSXETG00000018101	polr3a	98	92.523	ENSPSIG00000002092	POLR3A	86	92.523	Pelodiscus_sinensis
ENSXETG00000018101	polr3a	51	82.085	ENSPMGG00000010601	polr3a	97	82.085	Periophthalmus_magnuspinnatus
ENSXETG00000018101	polr3a	100	92.231	ENSPEMG00000006768	Polr3a	86	92.231	Peromyscus_maniculatus_bairdii
ENSXETG00000018101	polr3a	100	92.314	ENSPCIG00000015842	POLR3A	86	92.314	Phascolarctos_cinereus
ENSXETG00000018101	polr3a	53	89.134	ENSPFOG00000022090	POLR3A	99	89.134	Poecilia_formosa
ENSXETG00000018101	polr3a	53	89.134	ENSPFOG00000021951	polr3a	99	89.134	Poecilia_formosa
ENSXETG00000018101	polr3a	53	89.134	ENSPLAG00000008311	-	96	89.134	Poecilia_latipinna
ENSXETG00000018101	polr3a	100	90.560	ENSPLAG00000000997	polr3a	86	90.560	Poecilia_latipinna
ENSXETG00000018101	polr3a	100	90.476	ENSPMEG00000006821	polr3a	86	90.476	Poecilia_mexicana
ENSXETG00000018101	polr3a	100	90.393	ENSPREG00000002385	polr3a	86	90.393	Poecilia_reticulata
ENSXETG00000018101	polr3a	92	92.903	ENSPPYG00000002305	POLR3A	85	92.903	Pongo_abelii
ENSXETG00000018101	polr3a	86	82.411	ENSPCAG00000005690	POLR3A	77	82.411	Procavia_capensis
ENSXETG00000018101	polr3a	100	92.314	ENSPCOG00000028311	POLR3A	86	92.314	Propithecus_coquereli
ENSXETG00000018101	polr3a	100	90.977	ENSPVAG00000015553	POLR3A	86	90.977	Pteropus_vampyrus
ENSXETG00000018101	polr3a	100	90.058	ENSPNYG00000020987	polr3a	86	90.058	Pundamilia_nyererei
ENSXETG00000018101	polr3a	100	85.213	ENSPNAG00000006629	polr3a	85	85.213	Pygocentrus_nattereri
ENSXETG00000018101	polr3a	100	92.231	ENSRNOG00000010008	Polr3a	86	92.231	Rattus_norvegicus
ENSXETG00000018101	polr3a	100	87.719	ENSRBIG00000034967	POLR3A	86	87.719	Rhinopithecus_bieti
ENSXETG00000018101	polr3a	100	92.231	ENSRROG00000025527	POLR3A	86	92.231	Rhinopithecus_roxellana
ENSXETG00000018101	polr3a	99	48.458	YOR116C	RPO31	86	48.458	Saccharomyces_cerevisiae
ENSXETG00000018101	polr3a	100	92.398	ENSSBOG00000022199	POLR3A	86	92.398	Saimiri_boliviensis_boliviensis
ENSXETG00000018101	polr3a	100	92.231	ENSSHAG00000007588	POLR3A	81	92.231	Sarcophilus_harrisii
ENSXETG00000018101	polr3a	100	91.479	ENSSFOG00015014357	polr3a	86	91.479	Scleropages_formosus
ENSXETG00000018101	polr3a	100	89.474	ENSSMAG00000001780	polr3a	86	89.474	Scophthalmus_maximus
ENSXETG00000018101	polr3a	100	90.643	ENSSDUG00000019840	polr3a	86	90.643	Seriola_dumerili
ENSXETG00000018101	polr3a	100	90.727	ENSSLDG00000023908	polr3a	86	90.727	Seriola_lalandi_dorsalis
ENSXETG00000018101	polr3a	64	93.417	ENSSARG00000009916	POLR3A	72	93.417	Sorex_araneus
ENSXETG00000018101	polr3a	100	90.226	ENSSPUG00000013209	POLR3A	86	90.226	Sphenodon_punctatus
ENSXETG00000018101	polr3a	100	90.560	ENSSPAG00000017712	polr3a	86	90.560	Stegastes_partitus
ENSXETG00000018101	polr3a	100	92.648	ENSSSCG00000010327	POLR3A	93	92.648	Sus_scrofa
ENSXETG00000018101	polr3a	100	92.815	ENSTGUG00000006423	-	86	92.815	Taeniopygia_guttata
ENSXETG00000018101	polr3a	99	90.050	ENSTRUG00000013488	polr3a	98	88.000	Takifugu_rubripes
ENSXETG00000018101	polr3a	100	89.491	ENSTNIG00000013151	polr3a	86	89.491	Tetraodon_nigroviridis
ENSXETG00000018101	polr3a	66	91.489	ENSTBEG00000015288	POLR3A	60	91.489	Tupaia_belangeri
ENSXETG00000018101	polr3a	100	84.294	ENSTTRG00000007817	POLR3A	86	84.294	Tursiops_truncatus
ENSXETG00000018101	polr3a	100	89.724	ENSUAMG00000011283	POLR3A	94	88.935	Ursus_americanus
ENSXETG00000018101	polr3a	100	92.398	ENSUMAG00000013913	POLR3A	86	92.398	Ursus_maritimus
ENSXETG00000018101	polr3a	94	90.514	ENSVPAG00000003285	POLR3A	82	90.514	Vicugna_pacos
ENSXETG00000018101	polr3a	100	92.231	ENSVVUG00000025523	POLR3A	86	92.231	Vulpes_vulpes
ENSXETG00000018101	polr3a	53	88.976	ENSXCOG00000006098	polr3a	98	88.976	Xiphophorus_couchianus
ENSXETG00000018101	polr3a	100	90.560	ENSXMAG00000015213	polr3a	91	90.533	Xiphophorus_maculatus