EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000018123 (Gene tree)
Gene ID: -
Gene Symbol: rbm17
Alias: -
Full Name: Xenopus tropicalis RNA binding motif protein 17 (rbm17)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 20193 bases
Position: chrGL172647.1:3603046-3623238
Accession: NM_001006731
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000054195	RRM_1	PF00076.22	0.00013	1	1
ENSXETP00000039311	RRM_1	PF00076.22	0.00013	1	1
ENSXETP00000054195	G-patch	PF01585.23	5.1e-13	1	1
ENSXETP00000039311	G-patch	PF01585.23	5.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000054195	-	1449	-	ENSXETP00000054195	399 (aa)	XP_012814291	Q6DIQ0
ENSXETT00000039311	-	1473	-	ENSXETP00000039311	407 (aa)	-	F6W1I5

Gene Model

Click here to download ENSXETG00000018123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000018123's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000018123	rbm17	100	85.821	ENSG00000134453	RBM17	99	85.821	Homo_sapiens
ENSXETG00000018123	rbm17	99	78.856	ENSAPOG00000007101	rbm17	99	79.104	Acanthochromis_polyacanthus
ENSXETG00000018123	rbm17	100	86.070	ENSAMEG00000002107	RBM17	99	86.070	Ailuropoda_melanoleuca
ENSXETG00000018123	rbm17	100	76.296	ENSACIG00000006251	rbm17	99	77.531	Amphilophus_citrinellus
ENSXETG00000018123	rbm17	100	78.713	ENSAOCG00000014892	rbm17	99	78.960	Amphiprion_ocellaris
ENSXETG00000018123	rbm17	100	78.713	ENSAPEG00000022779	rbm17	99	78.960	Amphiprion_percula
ENSXETG00000018123	rbm17	100	75.772	ENSATEG00000004406	rbm17	99	76.010	Anabas_testudineus
ENSXETG00000018123	rbm17	100	87.250	ENSAPLG00000004190	RBM17	99	87.250	Anas_platyrhynchos
ENSXETG00000018123	rbm17	90	83.558	ENSACAG00000005418	RBM17	99	83.558	Anolis_carolinensis
ENSXETG00000018123	rbm17	100	86.318	ENSANAG00000030127	RBM17	99	86.318	Aotus_nancymaae
ENSXETG00000018123	rbm17	100	72.637	ENSANAG00000019330	-	93	84.211	Aotus_nancymaae
ENSXETG00000018123	rbm17	100	75.369	ENSACLG00000003928	rbm17	99	76.601	Astatotilapia_calliptera
ENSXETG00000018123	rbm17	100	73.697	ENSAMXG00000005853	rbm17	99	76.066	Astyanax_mexicanus
ENSXETG00000018123	rbm17	100	86.318	ENSBTAG00000021951	RBM17	99	86.318	Bos_taurus
ENSXETG00000018123	rbm17	100	85.750	ENSBTAG00000011094	-	99	85.750	Bos_taurus
ENSXETG00000018123	rbm17	75	34.194	WBGene00010233	F58B3.7	92	32.741	Caenorhabditis_elegans
ENSXETG00000018123	rbm17	100	86.318	ENSCJAG00000020573	RBM17	99	86.318	Callithrix_jacchus
ENSXETG00000018123	rbm17	100	86.070	ENSCAFG00000005206	RBM17	99	86.070	Canis_familiaris
ENSXETG00000018123	rbm17	100	82.707	ENSCAFG00020005420	RBM17	99	82.338	Canis_lupus_dingo
ENSXETG00000018123	rbm17	100	86.318	ENSCHIG00000023204	-	99	86.318	Capra_hircus
ENSXETG00000018123	rbm17	100	83.582	ENSCHIG00000019921	-	99	83.582	Capra_hircus
ENSXETG00000018123	rbm17	100	85.679	ENSTSYG00000001165	RBM17	97	88.793	Carlito_syrichta
ENSXETG00000018123	rbm17	96	66.319	ENSCAPG00000006275	RBM17	99	70.083	Cavia_aperea
ENSXETG00000018123	rbm17	100	82.338	ENSCPOG00000005679	RBM17	99	82.338	Cavia_porcellus
ENSXETG00000018123	rbm17	100	86.318	ENSCCAG00000018655	RBM17	99	86.318	Cebus_capucinus
ENSXETG00000018123	rbm17	100	85.821	ENSCATG00000041566	RBM17	99	85.821	Cercocebus_atys
ENSXETG00000018123	rbm17	100	85.926	ENSCLAG00000012195	RBM17	99	85.926	Chinchilla_lanigera
ENSXETG00000018123	rbm17	100	85.821	ENSCSAG00000013564	RBM17	99	85.821	Chlorocebus_sabaeus
ENSXETG00000018123	rbm17	93	71.046	ENSCHOG00000005131	RBM17	100	71.046	Choloepus_hoffmanni
ENSXETG00000018123	rbm17	100	88.279	ENSCPBG00000019836	RBM17	99	88.279	Chrysemys_picta_bellii
ENSXETG00000018123	rbm17	100	46.845	ENSCSAVG00000008782	-	99	46.845	Ciona_savignyi
ENSXETG00000018123	rbm17	100	85.572	ENSCANG00000030987	RBM17	99	85.572	Colobus_angolensis_palliatus
ENSXETG00000018123	rbm17	98	76.923	ENSCANG00000023715	-	99	76.923	Colobus_angolensis_palliatus
ENSXETG00000018123	rbm17	100	85.926	ENSCGRG00001013842	Rbm17	99	85.926	Cricetulus_griseus_chok1gshd
ENSXETG00000018123	rbm17	100	66.418	ENSCGRG00001009256	-	99	65.423	Cricetulus_griseus_chok1gshd
ENSXETG00000018123	rbm17	100	85.926	ENSCGRG00000006907	Rbm17	99	85.926	Cricetulus_griseus_crigri
ENSXETG00000018123	rbm17	100	75.862	ENSCSEG00000018164	rbm17	99	76.108	Cynoglossus_semilaevis
ENSXETG00000018123	rbm17	100	71.393	ENSCVAG00000002476	rbm17	99	73.632	Cyprinodon_variegatus
ENSXETG00000018123	rbm17	100	75.118	ENSDARG00000031346	rbm17	99	75.118	Danio_rerio
ENSXETG00000018123	rbm17	100	86.567	ENSDNOG00000035920	RBM17	99	86.567	Dasypus_novemcinctus
ENSXETG00000018123	rbm17	99	36.404	FBgn0086683	Spf45	99	36.946	Drosophila_melanogaster
ENSXETG00000018123	rbm17	86	85.990	ENSETEG00000006642	RBM17	85	85.990	Echinops_telfairi
ENSXETG00000018123	rbm17	63	69.048	ENSEBUG00000010253	rbm17	85	69.048	Eptatretus_burgeri
ENSXETG00000018123	rbm17	92	81.671	ENSEASG00005009236	-	99	81.671	Equus_asinus_asinus
ENSXETG00000018123	rbm17	100	81.638	ENSEASG00005019205	-	99	81.638	Equus_asinus_asinus
ENSXETG00000018123	rbm17	100	75.676	ENSECAG00000001379	-	99	75.676	Equus_caballus
ENSXETG00000018123	rbm17	100	72.180	ENSECAG00000008939	RBM17	99	74.687	Equus_caballus
ENSXETG00000018123	rbm17	86	69.886	ENSEEUG00000013077	RBM17	100	69.886	Erinaceus_europaeus
ENSXETG00000018123	rbm17	100	72.960	ENSELUG00000006440	rbm17	99	72.960	Esox_lucius
ENSXETG00000018123	rbm17	100	86.070	ENSFCAG00000031988	RBM17	99	86.070	Felis_catus
ENSXETG00000018123	rbm17	100	87.500	ENSFALG00000001790	RBM17	99	87.500	Ficedula_albicollis
ENSXETG00000018123	rbm17	100	85.926	ENSFDAG00000007470	RBM17	99	85.926	Fukomys_damarensis
ENSXETG00000018123	rbm17	100	74.010	ENSFHEG00000001266	rbm17	99	74.257	Fundulus_heteroclitus
ENSXETG00000018123	rbm17	100	73.571	ENSGMOG00000008438	rbm17	100	73.571	Gadus_morhua
ENSXETG00000018123	rbm17	100	87.750	ENSGALG00000006332	RBM17	99	87.750	Gallus_gallus
ENSXETG00000018123	rbm17	100	76.980	ENSGAFG00000019879	rbm17	99	77.228	Gambusia_affinis
ENSXETG00000018123	rbm17	100	79.455	ENSGACG00000019174	rbm17	99	79.455	Gasterosteus_aculeatus
ENSXETG00000018123	rbm17	100	88.279	ENSGAGG00000019906	RBM17	99	88.279	Gopherus_agassizii
ENSXETG00000018123	rbm17	100	79.703	ENSHBUG00000016624	rbm17	99	79.950	Haplochromis_burtoni
ENSXETG00000018123	rbm17	100	85.926	ENSHGLG00000011580	RBM17	99	85.926	Heterocephalus_glaber_female
ENSXETG00000018123	rbm17	100	85.926	ENSHGLG00100010460	RBM17	99	85.926	Heterocephalus_glaber_male
ENSXETG00000018123	rbm17	100	67.910	ENSHGLG00100010556	-	99	67.910	Heterocephalus_glaber_male
ENSXETG00000018123	rbm17	100	74.880	ENSHCOG00000010865	rbm17	100	75.120	Hippocampus_comes
ENSXETG00000018123	rbm17	100	75.490	ENSIPUG00000007699	Rbm17	99	76.284	Ictalurus_punctatus
ENSXETG00000018123	rbm17	100	85.679	ENSSTOG00000013591	RBM17	99	85.679	Ictidomys_tridecemlineatus
ENSXETG00000018123	rbm17	100	63.250	ENSJJAG00000000993	-	99	60.945	Jaculus_jaculus
ENSXETG00000018123	rbm17	100	85.926	ENSJJAG00000022886	Rbm17	99	85.926	Jaculus_jaculus
ENSXETG00000018123	rbm17	100	75.495	ENSKMAG00000021400	rbm17	99	75.990	Kryptolebias_marmoratus
ENSXETG00000018123	rbm17	100	77.970	ENSLBEG00000000881	rbm17	99	74.822	Labrus_bergylta
ENSXETG00000018123	rbm17	100	65.962	ENSLACG00000017297	RBM17	99	65.962	Latimeria_chalumnae
ENSXETG00000018123	rbm17	100	84.367	ENSLOCG00000015659	rbm17	99	84.367	Lepisosteus_oculatus
ENSXETG00000018123	rbm17	100	85.258	ENSLAFG00000011629	RBM17	99	85.258	Loxodonta_africana
ENSXETG00000018123	rbm17	100	85.821	ENSMFAG00000035521	RBM17	99	85.821	Macaca_fascicularis
ENSXETG00000018123	rbm17	100	85.821	ENSMMUG00000015152	RBM17	99	85.821	Macaca_mulatta
ENSXETG00000018123	rbm17	100	85.821	ENSMNEG00000017264	RBM17	99	85.821	Macaca_nemestrina
ENSXETG00000018123	rbm17	100	85.821	ENSMLEG00000029340	RBM17	99	85.821	Mandrillus_leucophaeus
ENSXETG00000018123	rbm17	100	73.697	ENSMAMG00000000387	rbm17	99	74.584	Mastacembelus_armatus
ENSXETG00000018123	rbm17	100	76.850	ENSMZEG00005015179	rbm17	99	77.088	Maylandia_zebra
ENSXETG00000018123	rbm17	100	86.453	ENSMGAG00000003981	RBM17	99	86.453	Meleagris_gallopavo
ENSXETG00000018123	rbm17	100	85.926	ENSMAUG00000019247	Rbm17	99	85.926	Mesocricetus_auratus
ENSXETG00000018123	rbm17	100	78.986	ENSMICG00000041489	-	99	78.986	Microcebus_murinus
ENSXETG00000018123	rbm17	100	84.938	ENSMICG00000003976	-	99	84.938	Microcebus_murinus
ENSXETG00000018123	rbm17	93	70.667	ENSMOCG00000014517	-	99	70.667	Microtus_ochrogaster
ENSXETG00000018123	rbm17	100	85.926	ENSMOCG00000011847	Rbm17	99	85.926	Microtus_ochrogaster
ENSXETG00000018123	rbm17	100	71.883	ENSMMOG00000010264	rbm17	99	71.883	Mola_mola
ENSXETG00000018123	rbm17	100	86.816	ENSMODG00000016648	RBM17	99	86.816	Monodelphis_domestica
ENSXETG00000018123	rbm17	100	74.408	ENSMALG00000010597	rbm17	99	74.815	Monopterus_albus
ENSXETG00000018123	rbm17	100	86.173	MGP_CAROLIEiJ_G0023173	Rbm17	99	86.173	Mus_caroli
ENSXETG00000018123	rbm17	100	86.173	ENSMUSG00000037197	Rbm17	99	86.173	Mus_musculus
ENSXETG00000018123	rbm17	100	86.667	MGP_PahariEiJ_G0019233	Rbm17	99	86.667	Mus_pahari
ENSXETG00000018123	rbm17	100	86.173	MGP_SPRETEiJ_G0024091	Rbm17	99	86.173	Mus_spretus
ENSXETG00000018123	rbm17	87	84.814	ENSMPUG00000016359	RBM17	97	84.814	Mustela_putorius_furo
ENSXETG00000018123	rbm17	100	83.990	ENSMLUG00000002302	-	99	83.990	Myotis_lucifugus
ENSXETG00000018123	rbm17	100	81.095	ENSMLUG00000025709	-	99	81.095	Myotis_lucifugus
ENSXETG00000018123	rbm17	100	85.926	ENSNGAG00000000741	Rbm17	99	85.926	Nannospalax_galili
ENSXETG00000018123	rbm17	99	60.000	ENSNGAG00000000663	-	99	60.000	Nannospalax_galili
ENSXETG00000018123	rbm17	100	73.881	ENSNBRG00000018148	rbm17	99	75.000	Neolamprologus_brichardi
ENSXETG00000018123	rbm17	100	85.821	ENSNLEG00000033350	RBM17	99	85.821	Nomascus_leucogenys
ENSXETG00000018123	rbm17	100	80.846	ENSMEUG00000011347	RBM17	99	80.846	Notamacropus_eugenii
ENSXETG00000018123	rbm17	100	73.134	ENSOPRG00000002993	RBM17	99	73.134	Ochotona_princeps
ENSXETG00000018123	rbm17	97	67.436	ENSODEG00000007286	-	99	67.436	Octodon_degus
ENSXETG00000018123	rbm17	100	85.926	ENSODEG00000004393	RBM17	99	85.926	Octodon_degus
ENSXETG00000018123	rbm17	100	79.753	ENSONIG00000011838	rbm17	99	80.000	Oreochromis_niloticus
ENSXETG00000018123	rbm17	100	85.856	ENSOANG00000015455	RBM17	99	85.856	Ornithorhynchus_anatinus
ENSXETG00000018123	rbm17	100	76.179	ENSORLG00000028798	rbm17	99	77.284	Oryzias_latipes
ENSXETG00000018123	rbm17	100	76.303	ENSORLG00020004593	rbm17	99	76.790	Oryzias_latipes_hni
ENSXETG00000018123	rbm17	100	79.506	ENSORLG00015000033	rbm17	99	79.753	Oryzias_latipes_hsok
ENSXETG00000018123	rbm17	100	76.066	ENSOMEG00000012060	rbm17	99	84.810	Oryzias_melastigma
ENSXETG00000018123	rbm17	100	84.938	ENSOGAG00000015687	RBM17	99	84.938	Otolemur_garnettii
ENSXETG00000018123	rbm17	100	86.318	ENSOARG00000012975	RBM17	99	86.318	Ovis_aries
ENSXETG00000018123	rbm17	100	85.821	ENSPPAG00000032347	RBM17	99	85.821	Pan_paniscus
ENSXETG00000018123	rbm17	100	86.070	ENSPPRG00000010706	RBM17	99	86.070	Panthera_pardus
ENSXETG00000018123	rbm17	100	86.070	ENSPTIG00000007596	RBM17	99	86.070	Panthera_tigris_altaica
ENSXETG00000018123	rbm17	100	85.821	ENSPTRG00000002265	RBM17	99	85.821	Pan_troglodytes
ENSXETG00000018123	rbm17	100	85.821	ENSPANG00000023425	RBM17	99	85.821	Papio_anubis
ENSXETG00000018123	rbm17	100	74.690	ENSPKIG00000005048	-	99	74.690	Paramormyrops_kingsleyae
ENSXETG00000018123	rbm17	100	77.069	ENSPKIG00000025526	rbm17	99	76.179	Paramormyrops_kingsleyae
ENSXETG00000018123	rbm17	100	87.097	ENSPSIG00000012332	RBM17	99	87.097	Pelodiscus_sinensis
ENSXETG00000018123	rbm17	100	72.749	ENSPMGG00000007980	rbm17	99	74.453	Periophthalmus_magnuspinnatus
ENSXETG00000018123	rbm17	100	85.926	ENSPEMG00000014320	Rbm17	99	85.926	Peromyscus_maniculatus_bairdii
ENSXETG00000018123	rbm17	100	86.386	ENSPCIG00000019260	-	99	86.386	Phascolarctos_cinereus
ENSXETG00000018123	rbm17	100	75.118	ENSPFOG00000013271	rbm17	99	75.355	Poecilia_formosa
ENSXETG00000018123	rbm17	100	75.355	ENSPLAG00000004455	rbm17	99	75.592	Poecilia_latipinna
ENSXETG00000018123	rbm17	100	78.272	ENSPMEG00000014864	rbm17	99	78.519	Poecilia_mexicana
ENSXETG00000018123	rbm17	100	74.257	ENSPREG00000015589	rbm17	99	74.505	Poecilia_reticulata
ENSXETG00000018123	rbm17	100	85.821	ENSPPYG00000002067	RBM17	99	85.821	Pongo_abelii
ENSXETG00000018123	rbm17	100	63.092	ENSPPYG00000019881	-	100	63.092	Pongo_abelii
ENSXETG00000018123	rbm17	81	59.692	ENSPPYG00000019042	-	100	59.568	Pongo_abelii
ENSXETG00000018123	rbm17	100	78.358	ENSPCAG00000016879	RBM17	99	78.358	Procavia_capensis
ENSXETG00000018123	rbm17	100	85.821	ENSPCOG00000027881	RBM17	99	85.821	Propithecus_coquereli
ENSXETG00000018123	rbm17	100	75.622	ENSPVAG00000015499	RBM17	99	75.622	Pteropus_vampyrus
ENSXETG00000018123	rbm17	100	72.932	ENSPNYG00000015274	rbm17	99	73.183	Pundamilia_nyererei
ENSXETG00000018123	rbm17	100	76.066	ENSPNAG00000030046	rbm17	99	76.066	Pygocentrus_nattereri
ENSXETG00000018123	rbm17	100	85.926	ENSRNOG00000018767	Rbm17	99	85.926	Rattus_norvegicus
ENSXETG00000018123	rbm17	100	85.821	ENSRBIG00000043727	RBM17	99	85.821	Rhinopithecus_bieti
ENSXETG00000018123	rbm17	100	85.821	ENSRROG00000044142	RBM17	99	85.821	Rhinopithecus_roxellana
ENSXETG00000018123	rbm17	100	86.070	ENSSBOG00000031661	-	99	86.070	Saimiri_boliviensis_boliviensis
ENSXETG00000018123	rbm17	100	77.307	ENSSBOG00000023653	-	99	77.307	Saimiri_boliviensis_boliviensis
ENSXETG00000018123	rbm17	100	86.816	ENSSHAG00000012480	-	99	86.816	Sarcophilus_harrisii
ENSXETG00000018123	rbm17	100	80.494	ENSSFOG00015009892	rbm17	99	80.494	Scleropages_formosus
ENSXETG00000018123	rbm17	100	75.561	ENSSMAG00000012368	rbm17	99	75.561	Scophthalmus_maximus
ENSXETG00000018123	rbm17	100	77.913	ENSSDUG00000015015	rbm17	99	78.832	Seriola_dumerili
ENSXETG00000018123	rbm17	100	77.913	ENSSLDG00000014486	rbm17	99	78.832	Seriola_lalandi_dorsalis
ENSXETG00000018123	rbm17	59	66.383	ENSSARG00000001792	-	79	92.381	Sorex_araneus
ENSXETG00000018123	rbm17	100	88.000	ENSSPUG00000001036	RBM17	99	88.000	Sphenodon_punctatus
ENSXETG00000018123	rbm17	100	79.208	ENSSPAG00000002338	rbm17	99	79.455	Stegastes_partitus
ENSXETG00000018123	rbm17	100	86.070	ENSSSCG00000011134	RBM17	99	86.070	Sus_scrofa
ENSXETG00000018123	rbm17	100	86.600	ENSTGUG00000002013	RBM17	99	86.600	Taeniopygia_guttata
ENSXETG00000018123	rbm17	100	78.218	ENSTRUG00000010698	rbm17	99	78.218	Takifugu_rubripes
ENSXETG00000018123	rbm17	100	79.607	ENSTNIG00000006892	rbm17	99	79.607	Tetraodon_nigroviridis
ENSXETG00000018123	rbm17	100	66.584	ENSTBEG00000014686	RBM17	99	66.584	Tupaia_belangeri
ENSXETG00000018123	rbm17	90	84.765	ENSTTRG00000001344	RBM17	99	84.765	Tursiops_truncatus
ENSXETG00000018123	rbm17	100	82.957	ENSUAMG00000009499	RBM17	99	82.957	Ursus_americanus
ENSXETG00000018123	rbm17	100	85.821	ENSUMAG00000012237	RBM17	99	85.821	Ursus_maritimus
ENSXETG00000018123	rbm17	100	73.464	ENSVPAG00000005497	RBM17	99	73.464	Vicugna_pacos
ENSXETG00000018123	rbm17	100	82.707	ENSVVUG00000006780	RBM17	97	84.814	Vulpes_vulpes
ENSXETG00000018123	rbm17	100	77.475	ENSXMAG00000008674	rbm17	99	77.970	Xiphophorus_maculatus