EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000018189 (Gene tree)
Gene ID: -
Gene Symbol: smn2
Alias: -
Full Name: Xenopus tropicalis survival of motor neuron 2%2C centromeric (smn2)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 6505 bases
Position: chrGL172749.1:416857-423361
Accession: NM_001100240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000039449	SMN	PF06003.12	3.4e-160	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000039449	-	1093	-	ENSXETP00000039449	291 (aa)	-	F7AWW9

Gene Model

Click here to download ENSXETG00000018189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000018189's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000018189	smn2	90	36.268	ENSXETG00000004912	-	82	50.685

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000018189	smn2	95	52.414	ENSG00000205571	SMN2	90	65.432	Homo_sapiens
ENSXETG00000018189	smn2	95	52.414	ENSG00000172062	SMN1	90	65.432	Homo_sapiens
ENSXETG00000018189	smn2	95	49.310	ENSAPOG00000011324	smn1	95	55.197	Acanthochromis_polyacanthus
ENSXETG00000018189	smn2	95	54.196	ENSAMEG00000003316	-	95	53.608	Ailuropoda_melanoleuca
ENSXETG00000018189	smn2	88	47.212	ENSACIG00000019772	-	97	48.339	Amphilophus_citrinellus
ENSXETG00000018189	smn2	95	50.859	ENSAOCG00000024444	smn1	95	57.040	Amphiprion_ocellaris
ENSXETG00000018189	smn2	95	50.859	ENSAPEG00000016504	smn1	95	56.738	Amphiprion_percula
ENSXETG00000018189	smn2	90	51.449	ENSATEG00000002182	smn1	80	55.147	Anabas_testudineus
ENSXETG00000018189	smn2	67	56.716	ENSAPLG00000010912	-	98	54.822	Anas_platyrhynchos
ENSXETG00000018189	smn2	97	61.972	ENSACAG00000010017	-	99	60.211	Anolis_carolinensis
ENSXETG00000018189	smn2	99	52.318	ENSANAG00000032133	-	99	50.166	Aotus_nancymaae
ENSXETG00000018189	smn2	94	50.345	ENSACLG00000007308	smn1	92	53.287	Astatotilapia_calliptera
ENSXETG00000018189	smn2	95	52.708	ENSAMXG00000013884	smn1	99	57.857	Astyanax_mexicanus
ENSXETG00000018189	smn2	93	55.477	ENSBTAG00000005743	SMN2	95	55.160	Bos_taurus
ENSXETG00000018189	smn2	95	51.986	ENSCJAG00000016290	-	90	67.073	Callithrix_jacchus
ENSXETG00000018189	smn2	95	54.737	ENSCAFG00000007812	SMN	95	54.093	Canis_familiaris
ENSXETG00000018189	smn2	95	54.737	ENSCAFG00020019229	-	88	54.093	Canis_lupus_dingo
ENSXETG00000018189	smn2	92	55.674	ENSCHIG00000015559	-	92	55.357	Capra_hircus
ENSXETG00000018189	smn2	96	54.671	ENSTSYG00000012058	-	93	63.415	Carlito_syrichta
ENSXETG00000018189	smn2	69	49.515	ENSCAPG00000011021	-	91	49.756	Cavia_aperea
ENSXETG00000018189	smn2	95	54.196	ENSCPOG00000036973	-	95	54.355	Cavia_porcellus
ENSXETG00000018189	smn2	95	53.952	ENSCPOG00000012328	-	96	54.795	Cavia_porcellus
ENSXETG00000018189	smn2	95	53.147	ENSCCAG00000018127	-	90	65.854	Cebus_capucinus
ENSXETG00000018189	smn2	95	51.379	ENSCATG00000037002	-	90	66.667	Cercocebus_atys
ENSXETG00000018189	smn2	96	50.699	ENSCLAG00000000284	-	94	53.929	Chinchilla_lanigera
ENSXETG00000018189	smn2	95	52.759	ENSCSAG00000015688	-	92	55.914	Chlorocebus_sabaeus
ENSXETG00000018189	smn2	68	76.667	ENSCHOG00000007346	-	100	50.000	Choloepus_hoffmanni
ENSXETG00000018189	smn2	99	61.592	ENSCPBG00000010968	-	99	62.500	Chrysemys_picta_bellii
ENSXETG00000018189	smn2	95	55.208	ENSCANG00000038242	-	90	67.901	Colobus_angolensis_palliatus
ENSXETG00000018189	smn2	90	53.114	ENSCANG00000033324	-	90	53.480	Colobus_angolensis_palliatus
ENSXETG00000018189	smn2	96	41.404	ENSCGRG00001016998	-	93	42.029	Cricetulus_griseus_chok1gshd
ENSXETG00000018189	smn2	96	54.325	ENSCGRG00001017959	-	95	54.448	Cricetulus_griseus_chok1gshd
ENSXETG00000018189	smn2	96	54.325	ENSCGRG00000007698	Smn1	95	54.448	Cricetulus_griseus_crigri
ENSXETG00000018189	smn2	93	49.129	ENSCSEG00000015227	smn1	99	49.827	Cynoglossus_semilaevis
ENSXETG00000018189	smn2	57	59.639	ENSCVAG00000007498	smn1	95	55.872	Cyprinodon_variegatus
ENSXETG00000018189	smn2	97	54.983	ENSDARG00000018494	smn1	99	54.861	Danio_rerio
ENSXETG00000018189	smn2	81	51.429	ENSDNOG00000007283	-	97	52.321	Dasypus_novemcinctus
ENSXETG00000018189	smn2	83	46.939	ENSDNOG00000045949	-	94	45.607	Dasypus_novemcinctus
ENSXETG00000018189	smn2	96	47.735	ENSDORG00000007082	Smn1	92	51.481	Dipodomys_ordii
ENSXETG00000018189	smn2	55	52.439	ENSETEG00000001406	-	76	51.235	Echinops_telfairi
ENSXETG00000018189	smn2	90	37.667	ENSEBUG00000011902	smn1	94	41.727	Eptatretus_burgeri
ENSXETG00000018189	smn2	93	48.214	ENSEASG00005018000	-	98	48.399	Equus_asinus_asinus
ENSXETG00000018189	smn2	95	50.871	ENSECAG00000015215	-	95	53.737	Equus_caballus
ENSXETG00000018189	smn2	85	55.731	ENSEEUG00000015777	-	100	54.023	Erinaceus_europaeus
ENSXETG00000018189	smn2	92	57.818	ENSELUG00000018067	smn1	95	55.311	Esox_lucius
ENSXETG00000018189	smn2	95	54.196	ENSFCAG00000028292	SMN	91	65.432	Felis_catus
ENSXETG00000018189	smn2	91	57.509	ENSFALG00000012320	-	99	58.423	Ficedula_albicollis
ENSXETG00000018189	smn2	95	53.819	ENSFDAG00000017683	-	93	54.286	Fukomys_damarensis
ENSXETG00000018189	smn2	94	49.306	ENSFHEG00000018508	smn1	97	54.545	Fundulus_heteroclitus
ENSXETG00000018189	smn2	95	53.091	ENSGMOG00000017279	smn1	93	54.307	Gadus_morhua
ENSXETG00000018189	smn2	95	61.290	ENSGALG00000002430	SMN	99	60.215	Gallus_gallus
ENSXETG00000018189	smn2	95	55.401	ENSGAFG00000009501	smn1	95	57.040	Gambusia_affinis
ENSXETG00000018189	smn2	95	52.899	ENSGACG00000010584	smn1	92	57.836	Gasterosteus_aculeatus
ENSXETG00000018189	smn2	93	37.410	ENSGAGG00000013639	-	56	54.386	Gopherus_agassizii
ENSXETG00000018189	smn2	97	61.484	ENSGAGG00000011374	-	100	61.131	Gopherus_agassizii
ENSXETG00000018189	smn2	63	58.289	ENSGGOG00000026704	-	83	58.696	Gorilla_gorilla
ENSXETG00000018189	smn2	90	52.273	ENSGGOG00000003872	-	94	52.107	Gorilla_gorilla
ENSXETG00000018189	smn2	94	52.313	ENSHBUG00000013987	smn1	98	55.160	Haplochromis_burtoni
ENSXETG00000018189	smn2	95	55.709	ENSHGLG00000001018	-	93	56.940	Heterocephalus_glaber_female
ENSXETG00000018189	smn2	92	54.513	ENSHGLG00000001905	-	94	54.513	Heterocephalus_glaber_female
ENSXETG00000018189	smn2	95	55.709	ENSHGLG00100011252	-	93	56.940	Heterocephalus_glaber_male
ENSXETG00000018189	smn2	91	54.779	ENSHGLG00100018676	-	97	54.779	Heterocephalus_glaber_male
ENSXETG00000018189	smn2	88	49.281	ENSHCOG00000017136	smn1	87	54.307	Hippocampus_comes
ENSXETG00000018189	smn2	94	55.052	ENSIPUG00000012580	smn1	86	56.318	Ictalurus_punctatus
ENSXETG00000018189	smn2	90	56.506	ENSSTOG00000012288	-	95	56.877	Ictidomys_tridecemlineatus
ENSXETG00000018189	smn2	95	53.521	ENSKMAG00000007239	smn1	96	55.303	Kryptolebias_marmoratus
ENSXETG00000018189	smn2	95	53.061	ENSLBEG00000022550	smn1	95	54.135	Labrus_bergylta
ENSXETG00000018189	smn2	92	36.491	ENSLACG00000009808	-	91	36.299	Latimeria_chalumnae
ENSXETG00000018189	smn2	99	32.131	ENSLOCG00000000801	-	95	30.928	Lepisosteus_oculatus
ENSXETG00000018189	smn2	94	53.684	ENSLOCG00000011339	smn1	98	58.123	Lepisosteus_oculatus
ENSXETG00000018189	smn2	98	52.508	ENSLAFG00000003425	-	96	53.716	Loxodonta_africana
ENSXETG00000018189	smn2	95	49.655	ENSMFAG00000008812	-	92	52.688	Macaca_fascicularis
ENSXETG00000018189	smn2	95	52.414	ENSMFAG00000031523	SMN1	90	67.901	Macaca_fascicularis
ENSXETG00000018189	smn2	95	52.414	ENSMMUG00000020214	SMN1	90	67.901	Macaca_mulatta
ENSXETG00000018189	smn2	95	48.780	ENSMMUG00000030594	-	92	52.330	Macaca_mulatta
ENSXETG00000018189	smn2	95	52.431	ENSMNEG00000035094	-	90	67.901	Macaca_nemestrina
ENSXETG00000018189	smn2	73	41.441	ENSMNEG00000036423	-	84	43.119	Macaca_nemestrina
ENSXETG00000018189	smn2	93	52.982	ENSMLEG00000041902	-	93	62.791	Mandrillus_leucophaeus
ENSXETG00000018189	smn2	95	50.345	ENSMAMG00000011034	smn1	95	55.755	Mastacembelus_armatus
ENSXETG00000018189	smn2	95	53.546	ENSMZEG00005013634	smn1	98	56.584	Maylandia_zebra
ENSXETG00000018189	smn2	69	58.128	ENSMGAG00000008889	-	100	56.650	Meleagris_gallopavo
ENSXETG00000018189	smn2	96	53.287	ENSMAUG00000010262	Smn1	95	53.737	Mesocricetus_auratus
ENSXETG00000018189	smn2	77	52.119	ENSMICG00000034708	-	79	58.152	Microcebus_murinus
ENSXETG00000018189	smn2	96	53.659	ENSMOCG00000017833	Smn1	95	54.035	Microtus_ochrogaster
ENSXETG00000018189	smn2	91	50.943	ENSMMOG00000005504	smn1	96	50.752	Mola_mola
ENSXETG00000018189	smn2	91	59.176	ENSMODG00000001436	-	97	58.099	Monodelphis_domestica
ENSXETG00000018189	smn2	95	50.000	ENSMALG00000008025	smn1	98	54.895	Monopterus_albus
ENSXETG00000018189	smn2	96	53.659	MGP_CAROLIEiJ_G0018836	Smn1	96	52.837	Mus_caroli
ENSXETG00000018189	smn2	96	53.659	ENSMUSG00000021645	Smn1	95	53.405	Mus_musculus
ENSXETG00000018189	smn2	96	50.877	MGP_PahariEiJ_G0015911	Smn1	95	53.214	Mus_pahari
ENSXETG00000018189	smn2	96	53.310	MGP_SPRETEiJ_G0019718	Smn1	96	52.482	Mus_spretus
ENSXETG00000018189	smn2	91	55.311	ENSMPUG00000014470	-	94	54.945	Mustela_putorius_furo
ENSXETG00000018189	smn2	96	53.061	ENSMLUG00000010603	-	90	53.147	Myotis_lucifugus
ENSXETG00000018189	smn2	98	54.209	ENSNGAG00000019833	Smn1	97	53.952	Nannospalax_galili
ENSXETG00000018189	smn2	95	50.853	ENSNBRG00000023000	smn1	98	56.643	Neolamprologus_brichardi
ENSXETG00000018189	smn2	95	53.103	ENSNLEG00000004454	-	90	65.432	Nomascus_leucogenys
ENSXETG00000018189	smn2	64	60.317	ENSMEUG00000011393	-	99	57.778	Notamacropus_eugenii
ENSXETG00000018189	smn2	85	55.642	ENSOPRG00000002015	-	100	57.198	Ochotona_princeps
ENSXETG00000018189	smn2	92	50.174	ENSODEG00000015976	-	99	50.825	Octodon_degus
ENSXETG00000018189	smn2	95	52.982	ENSONIG00000011799	smn1	98	56.294	Oreochromis_niloticus
ENSXETG00000018189	smn2	94	64.599	ENSOANG00000001626	-	97	63.139	Ornithorhynchus_anatinus
ENSXETG00000018189	smn2	96	55.036	ENSOCUG00000017097	-	93	56.827	Oryctolagus_cuniculus
ENSXETG00000018189	smn2	99	53.242	ENSOCUG00000026649	-	97	54.930	Oryctolagus_cuniculus
ENSXETG00000018189	smn2	96	44.710	ENSOCUG00000025183	-	97	45.918	Oryctolagus_cuniculus
ENSXETG00000018189	smn2	95	51.049	ENSORLG00000010552	smn1	95	55.755	Oryzias_latipes
ENSXETG00000018189	smn2	95	54.710	ENSORLG00020007936	smn1	98	53.623	Oryzias_latipes_hni
ENSXETG00000018189	smn2	95	51.399	ENSORLG00015022425	smn1	95	55.036	Oryzias_latipes_hsok
ENSXETG00000018189	smn2	53	60.645	ENSOMEG00000007824	smn1	95	56.318	Oryzias_melastigma
ENSXETG00000018189	smn2	90	51.273	ENSOGAG00000031414	-	92	49.275	Otolemur_garnettii
ENSXETG00000018189	smn2	88	54.887	ENSOARG00000005425	-	95	53.612	Ovis_aries
ENSXETG00000018189	smn2	95	52.759	ENSPPAG00000036640	-	90	65.432	Pan_paniscus
ENSXETG00000018189	smn2	95	54.196	ENSPPRG00000005575	-	91	65.432	Panthera_pardus
ENSXETG00000018189	smn2	95	51.916	ENSPTIG00000007745	-	92	65.432	Panthera_tigris_altaica
ENSXETG00000018189	smn2	95	53.925	ENSPTRG00000016955	-	90	65.432	Pan_troglodytes
ENSXETG00000018189	smn2	95	53.103	ENSPANG00000013601	-	90	67.901	Papio_anubis
ENSXETG00000018189	smn2	95	50.530	ENSPANG00000000253	-	94	52.797	Papio_anubis
ENSXETG00000018189	smn2	95	54.286	ENSPKIG00000011096	smn1	98	55.872	Paramormyrops_kingsleyae
ENSXETG00000018189	smn2	91	60.526	ENSPSIG00000014787	-	90	59.286	Pelodiscus_sinensis
ENSXETG00000018189	smn2	94	48.780	ENSPMGG00000012285	smn1	98	51.071	Periophthalmus_magnuspinnatus
ENSXETG00000018189	smn2	91	45.818	ENSPMAG00000005004	smn1	94	43.772	Petromyzon_marinus
ENSXETG00000018189	smn2	91	61.194	ENSPCIG00000025764	-	93	62.313	Phascolarctos_cinereus
ENSXETG00000018189	smn2	95	55.789	ENSPFOG00000007786	smn1	95	56.679	Poecilia_formosa
ENSXETG00000018189	smn2	95	55.789	ENSPLAG00000012071	smn1	95	56.679	Poecilia_latipinna
ENSXETG00000018189	smn2	95	55.789	ENSPMEG00000017085	smn1	95	56.679	Poecilia_mexicana
ENSXETG00000018189	smn2	95	55.052	ENSPREG00000005824	smn1	95	55.957	Poecilia_reticulata
ENSXETG00000018189	smn2	84	41.224	ENSPPYG00000019189	-	99	42.857	Pongo_abelii
ENSXETG00000018189	smn2	90	51.282	ENSPPYG00000015533	-	94	54.511	Pongo_abelii
ENSXETG00000018189	smn2	90	53.285	ENSPCAG00000004187	-	97	53.585	Procavia_capensis
ENSXETG00000018189	smn2	67	51.741	ENSPCOG00000022307	-	91	51.220	Propithecus_coquereli
ENSXETG00000018189	smn2	95	55.245	ENSPVAG00000005977	-	92	56.475	Pteropus_vampyrus
ENSXETG00000018189	smn2	95	50.853	ENSPNYG00000014148	smn1	98	56.643	Pundamilia_nyererei
ENSXETG00000018189	smn2	95	55.944	ENSPNAG00000014007	smn1	90	55.068	Pygocentrus_nattereri
ENSXETG00000018189	smn2	93	53.597	ENSRNOG00000018067	Smn1	95	53.381	Rattus_norvegicus
ENSXETG00000018189	smn2	90	48.889	ENSRBIG00000036775	-	89	50.189	Rhinopithecus_bieti
ENSXETG00000018189	smn2	95	52.759	ENSRBIG00000037052	-	90	67.901	Rhinopithecus_bieti
ENSXETG00000018189	smn2	95	49.286	ENSRROG00000031088	-	91	50.192	Rhinopithecus_roxellana
ENSXETG00000018189	smn2	95	52.759	ENSRROG00000039399	-	90	67.901	Rhinopithecus_roxellana
ENSXETG00000018189	smn2	95	54.737	ENSSBOG00000011665	-	90	66.667	Saimiri_boliviensis_boliviensis
ENSXETG00000018189	smn2	60	54.023	ENSSBOG00000020112	-	87	49.416	Saimiri_boliviensis_boliviensis
ENSXETG00000018189	smn2	97	58.947	ENSSHAG00000001499	-	97	60.300	Sarcophilus_harrisii
ENSXETG00000018189	smn2	95	58.363	ENSSFOG00015015507	smn1	95	59.707	Scleropages_formosus
ENSXETG00000018189	smn2	95	53.025	ENSSMAG00000007922	smn1	95	53.846	Scophthalmus_maximus
ENSXETG00000018189	smn2	95	49.310	ENSSDUG00000018533	smn1	95	54.676	Seriola_dumerili
ENSXETG00000018189	smn2	95	49.655	ENSSLDG00000021135	smn1	95	55.036	Seriola_lalandi_dorsalis
ENSXETG00000018189	smn2	94	62.637	ENSSPUG00000000373	-	96	63.736	Sphenodon_punctatus
ENSXETG00000018189	smn2	95	54.348	ENSSPAG00000004345	smn1	98	55.088	Stegastes_partitus
ENSXETG00000018189	smn2	96	41.608	ENSSSCG00000029127	-	90	44.689	Sus_scrofa
ENSXETG00000018189	smn2	96	56.098	ENSSSCG00000016970	-	94	56.383	Sus_scrofa
ENSXETG00000018189	smn2	88	55.849	ENSTGUG00000001548	-	95	53.585	Taeniopygia_guttata
ENSXETG00000018189	smn2	95	49.291	ENSTRUG00000000736	smn	98	53.333	Takifugu_rubripes
ENSXETG00000018189	smn2	95	48.264	ENSTNIG00000009892	smn1	98	51.399	Tetraodon_nigroviridis
ENSXETG00000018189	smn2	63	56.522	ENSTBEG00000002399	-	86	57.609	Tupaia_belangeri
ENSXETG00000018189	smn2	62	58.889	ENSTTRG00000005080	-	95	56.184	Tursiops_truncatus
ENSXETG00000018189	smn2	63	57.609	ENSUAMG00000024947	-	71	54.545	Ursus_americanus
ENSXETG00000018189	smn2	92	55.036	ENSUMAG00000007842	-	74	53.608	Ursus_maritimus
ENSXETG00000018189	smn2	90	52.060	ENSVPAG00000009887	-	94	50.562	Vicugna_pacos
ENSXETG00000018189	smn2	95	54.737	ENSVVUG00000006934	-	95	54.093	Vulpes_vulpes
ENSXETG00000018189	smn2	95	53.986	ENSXMAG00000001521	smn1	95	56.318	Xiphophorus_maculatus