EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000018276 (Gene tree)
Gene ID: -
Gene Symbol: gpatch1
Alias: -
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 21982 bases
Position: chrGL172806.1:1882144-1904125
Accession: XB-GENE-953282
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000039610	G-patch	PF01585.23	1e-06	1	1
ENSXETP00000028014	G-patch	PF01585.23	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000039610	-	2307	-	ENSXETP00000039610	769 (aa)	-	F7C3S1
ENSXETT00000028014	-	2799	-	ENSXETP00000028014	932 (aa)	-	F6XSQ2

Gene Model

Click here to download ENSXETG00000018276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000018276's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000018276	gpatch1	100	51.531	ENSG00000076650	GPATCH1	99	51.005	Homo_sapiens
ENSXETG00000018276	gpatch1	100	50.795	ENSAMEG00000015575	GPATCH1	99	50.953	Ailuropoda_melanoleuca
ENSXETG00000018276	gpatch1	83	52.874	ENSAOCG00000006668	gpatch1	99	44.082	Amphiprion_ocellaris
ENSXETG00000018276	gpatch1	84	50.525	ENSAPEG00000000026	gpatch1	99	43.814	Amphiprion_percula
ENSXETG00000018276	gpatch1	95	47.073	ENSATEG00000014494	gpatch1	99	43.655	Anabas_testudineus
ENSXETG00000018276	gpatch1	98	52.670	ENSAPLG00000007584	GPATCH1	95	50.461	Anas_platyrhynchos
ENSXETG00000018276	gpatch1	100	51.534	ENSANAG00000027002	GPATCH1	99	50.740	Aotus_nancymaae
ENSXETG00000018276	gpatch1	84	48.830	ENSACLG00000024740	gpatch1	79	47.321	Astatotilapia_calliptera
ENSXETG00000018276	gpatch1	96	49.159	ENSAMXG00000020177	gpatch1	96	45.593	Astyanax_mexicanus
ENSXETG00000018276	gpatch1	93	53.846	ENSBTAG00000000721	GPATCH1	99	50.839	Bos_taurus
ENSXETG00000018276	gpatch1	100	51.165	ENSCJAG00000000684	GPATCH1	99	50.370	Callithrix_jacchus
ENSXETG00000018276	gpatch1	100	50.997	ENSCAFG00000007457	GPATCH1	84	51.153	Canis_familiaris
ENSXETG00000018276	gpatch1	93	54.111	ENSCAFG00020019731	GPATCH1	92	52.332	Canis_lupus_dingo
ENSXETG00000018276	gpatch1	94	53.604	ENSCHIG00000019626	GPATCH1	99	50.943	Capra_hircus
ENSXETG00000018276	gpatch1	96	47.965	ENSCAPG00000008827	GPATCH1	98	48.850	Cavia_aperea
ENSXETG00000018276	gpatch1	100	49.205	ENSCPOG00000024477	GPATCH1	99	50.627	Cavia_porcellus
ENSXETG00000018276	gpatch1	100	50.847	ENSCCAG00000024676	GPATCH1	99	50.052	Cebus_capucinus
ENSXETG00000018276	gpatch1	100	51.483	ENSCATG00000043637	GPATCH1	99	50.523	Cercocebus_atys
ENSXETG00000018276	gpatch1	84	57.721	ENSCLAG00000003395	-	99	49.834	Chinchilla_lanigera
ENSXETG00000018276	gpatch1	100	50.424	ENSCSAG00000004743	GPATCH1	99	49.841	Chlorocebus_sabaeus
ENSXETG00000018276	gpatch1	93	48.880	ENSCHOG00000012865	GPATCH1	99	46.682	Choloepus_hoffmanni
ENSXETG00000018276	gpatch1	93	57.831	ENSCPBG00000000666	GPATCH1	88	60.115	Chrysemys_picta_bellii
ENSXETG00000018276	gpatch1	70	33.698	ENSCING00000012518	-	84	30.799	Ciona_intestinalis
ENSXETG00000018276	gpatch1	81	64.072	ENSCANG00000012540	GPATCH1	99	55.269	Colobus_angolensis_palliatus
ENSXETG00000018276	gpatch1	93	53.133	ENSCGRG00001016736	Gpatch1	98	50.273	Cricetulus_griseus_chok1gshd
ENSXETG00000018276	gpatch1	84	48.943	ENSCGRG00000005069	Gpatch1	80	45.216	Cricetulus_griseus_crigri
ENSXETG00000018276	gpatch1	96	37.200	ENSCSEG00000019456	-	93	39.520	Cynoglossus_semilaevis
ENSXETG00000018276	gpatch1	99	46.612	ENSDARG00000033418	gpatch1	99	44.478	Danio_rerio
ENSXETG00000018276	gpatch1	93	53.681	ENSDNOG00000005291	GPATCH1	96	51.617	Dasypus_novemcinctus
ENSXETG00000018276	gpatch1	94	51.478	ENSDORG00000012546	Gpatch1	96	49.369	Dipodomys_ordii
ENSXETG00000018276	gpatch1	99	49.093	ENSETEG00000003626	GPATCH1	100	48.453	Echinops_telfairi
ENSXETG00000018276	gpatch1	99	32.029	ENSEBUG00000011286	gpatch1	84	32.210	Eptatretus_burgeri
ENSXETG00000018276	gpatch1	93	53.439	ENSEASG00005021162	GPATCH1	100	50.746	Equus_asinus_asinus
ENSXETG00000018276	gpatch1	94	53.694	ENSECAG00000022743	GPATCH1	89	52.560	Equus_caballus
ENSXETG00000018276	gpatch1	73	50.000	ENSEEUG00000012925	GPATCH1	65	53.846	Erinaceus_europaeus
ENSXETG00000018276	gpatch1	93	47.036	ENSELUG00000018195	gpatch1	92	44.212	Esox_lucius
ENSXETG00000018276	gpatch1	100	49.580	ENSFCAG00000014917	GPATCH1	99	49.633	Felis_catus
ENSXETG00000018276	gpatch1	98	53.944	ENSFALG00000007821	GPATCH1	99	51.146	Ficedula_albicollis
ENSXETG00000018276	gpatch1	84	57.879	ENSFDAG00000003871	GPATCH1	98	49.390	Fukomys_damarensis
ENSXETG00000018276	gpatch1	83	43.969	ENSGMOG00000003830	gpatch1	98	39.792	Gadus_morhua
ENSXETG00000018276	gpatch1	98	55.641	ENSGALG00000004839	GPATCH1	96	50.726	Gallus_gallus
ENSXETG00000018276	gpatch1	99	44.085	ENSGACG00000017544	gpatch1	87	43.960	Gasterosteus_aculeatus
ENSXETG00000018276	gpatch1	94	56.746	ENSGAGG00000010067	GPATCH1	100	50.104	Gopherus_agassizii
ENSXETG00000018276	gpatch1	96	51.770	ENSGGOG00000010862	GPATCH1	98	51.054	Gorilla_gorilla
ENSXETG00000018276	gpatch1	81	46.991	ENSHBUG00000023462	gpatch1	84	45.869	Haplochromis_burtoni
ENSXETG00000018276	gpatch1	94	53.146	ENSHGLG00000009334	GPATCH1	99	49.841	Heterocephalus_glaber_female
ENSXETG00000018276	gpatch1	94	53.280	ENSHGLG00100018074	GPATCH1	99	49.947	Heterocephalus_glaber_male
ENSXETG00000018276	gpatch1	99	48.485	ENSIPUG00000014977	gpatch1	99	44.852	Ictalurus_punctatus
ENSXETG00000018276	gpatch1	100	51.477	ENSSTOG00000003720	GPATCH1	99	51.477	Ictidomys_tridecemlineatus
ENSXETG00000018276	gpatch1	93	55.855	ENSJJAG00000023765	Gpatch1	100	50.682	Jaculus_jaculus
ENSXETG00000018276	gpatch1	84	49.057	ENSKMAG00000017950	gpatch1	99	44.286	Kryptolebias_marmoratus
ENSXETG00000018276	gpatch1	84	48.355	ENSLBEG00000026527	gpatch1	88	44.160	Labrus_bergylta
ENSXETG00000018276	gpatch1	94	54.072	ENSLACG00000008130	GPATCH1	99	49.306	Latimeria_chalumnae
ENSXETG00000018276	gpatch1	84	52.932	ENSLOCG00000001800	gpatch1	99	47.500	Lepisosteus_oculatus
ENSXETG00000018276	gpatch1	94	54.308	ENSLAFG00000013589	GPATCH1	99	51.429	Loxodonta_africana
ENSXETG00000018276	gpatch1	95	52.219	ENSMFAG00000034418	GPATCH1	95	52.174	Macaca_fascicularis
ENSXETG00000018276	gpatch1	100	51.160	ENSMMUG00000011790	GPATCH1	99	50.586	Macaca_mulatta
ENSXETG00000018276	gpatch1	100	51.477	ENSMNEG00000045084	GPATCH1	99	50.794	Macaca_nemestrina
ENSXETG00000018276	gpatch1	86	50.852	ENSMLEG00000043840	GPATCH1	94	50.946	Mandrillus_leucophaeus
ENSXETG00000018276	gpatch1	84	48.684	ENSMZEG00005001926	gpatch1	80	47.066	Maylandia_zebra
ENSXETG00000018276	gpatch1	94	56.325	ENSMGAG00000005775	GPATCH1	98	49.789	Meleagris_gallopavo
ENSXETG00000018276	gpatch1	93	50.066	ENSMICG00000004829	GPATCH1	100	45.966	Microcebus_murinus
ENSXETG00000018276	gpatch1	93	52.727	ENSMOCG00000000174	Gpatch1	100	49.844	Microtus_ochrogaster
ENSXETG00000018276	gpatch1	76	51.092	ENSMMOG00000002140	gpatch1	87	44.360	Mola_mola
ENSXETG00000018276	gpatch1	94	53.806	ENSMODG00000012226	GPATCH1	99	49.018	Monodelphis_domestica
ENSXETG00000018276	gpatch1	99	42.591	ENSMALG00000014386	gpatch1	90	44.470	Monopterus_albus
ENSXETG00000018276	gpatch1	100	50.581	ENSMUSG00000063808	Gpatch1	99	51.001	Mus_musculus
ENSXETG00000018276	gpatch1	100	51.569	MGP_PahariEiJ_G0012816	Gpatch1	99	50.678	Mus_pahari
ENSXETG00000018276	gpatch1	100	51.848	MGP_SPRETEiJ_G0030681	Gpatch1	99	51.368	Mus_spretus
ENSXETG00000018276	gpatch1	99	50.742	ENSMPUG00000007658	GPATCH1	99	50.899	Mustela_putorius_furo
ENSXETG00000018276	gpatch1	100	51.266	ENSMLUG00000012161	GPATCH1	99	49.842	Myotis_lucifugus
ENSXETG00000018276	gpatch1	99	52.165	ENSNGAG00000012455	Gpatch1	99	52.754	Nannospalax_galili
ENSXETG00000018276	gpatch1	100	51.483	ENSNLEG00000007659	GPATCH1	99	50.899	Nomascus_leucogenys
ENSXETG00000018276	gpatch1	77	58.794	ENSMEUG00000015174	GPATCH1	74	53.438	Notamacropus_eugenii
ENSXETG00000018276	gpatch1	93	52.146	ENSODEG00000007103	GPATCH1	99	49.684	Octodon_degus
ENSXETG00000018276	gpatch1	84	49.777	ENSONIG00000003302	gpatch1	93	46.364	Oreochromis_niloticus
ENSXETG00000018276	gpatch1	94	55.941	ENSOANG00000012732	GPATCH1	99	50.313	Ornithorhynchus_anatinus
ENSXETG00000018276	gpatch1	93	54.155	ENSOCUG00000015905	GPATCH1	99	51.471	Oryctolagus_cuniculus
ENSXETG00000018276	gpatch1	95	46.335	ENSORLG00000018706	gpatch1	88	44.836	Oryzias_latipes
ENSXETG00000018276	gpatch1	94	45.032	ENSOMEG00000022688	gpatch1	99	43.487	Oryzias_melastigma
ENSXETG00000018276	gpatch1	86	57.018	ENSOGAG00000004016	GPATCH1	96	53.604	Otolemur_garnettii
ENSXETG00000018276	gpatch1	93	53.887	ENSOARG00000004365	GPATCH1	99	50.581	Ovis_aries
ENSXETG00000018276	gpatch1	100	51.320	ENSPPAG00000020990	GPATCH1	99	50.794	Pan_paniscus
ENSXETG00000018276	gpatch1	100	49.948	ENSPPRG00000017245	GPATCH1	99	50.105	Panthera_pardus
ENSXETG00000018276	gpatch1	100	50.472	ENSPTIG00000019649	GPATCH1	99	50.629	Panthera_tigris_altaica
ENSXETG00000018276	gpatch1	100	51.483	ENSPTRG00000010803	GPATCH1	99	50.899	Pan_troglodytes
ENSXETG00000018276	gpatch1	93	52.785	ENSPANG00000012374	GPATCH1	96	51.839	Papio_anubis
ENSXETG00000018276	gpatch1	84	50.291	ENSPKIG00000020745	gpatch1	77	48.214	Paramormyrops_kingsleyae
ENSXETG00000018276	gpatch1	94	55.336	ENSPSIG00000013433	GPATCH1	99	50.728	Pelodiscus_sinensis
ENSXETG00000018276	gpatch1	100	51.151	ENSPEMG00000000636	Gpatch1	99	50.105	Peromyscus_maniculatus_bairdii
ENSXETG00000018276	gpatch1	94	55.364	ENSPCIG00000021003	GPATCH1	94	53.099	Phascolarctos_cinereus
ENSXETG00000018276	gpatch1	88	42.075	ENSPREG00000008264	gpatch1	97	38.889	Poecilia_reticulata
ENSXETG00000018276	gpatch1	100	49.736	ENSPPYG00000009824	GPATCH1	99	49.206	Pongo_abelii
ENSXETG00000018276	gpatch1	79	69.163	ENSPCAG00000005931	GPATCH1	92	50.416	Procavia_capensis
ENSXETG00000018276	gpatch1	93	53.460	ENSPCOG00000009674	GPATCH1	98	49.309	Propithecus_coquereli
ENSXETG00000018276	gpatch1	77	56.616	ENSPVAG00000017767	GPATCH1	86	53.438	Pteropus_vampyrus
ENSXETG00000018276	gpatch1	84	49.337	ENSPNYG00000018189	gpatch1	88	47.429	Pundamilia_nyererei
ENSXETG00000018276	gpatch1	84	52.057	ENSPNAG00000013187	gpatch1	99	44.389	Pygocentrus_nattereri
ENSXETG00000018276	gpatch1	100	50.738	ENSRNOG00000011584	Gpatch1	99	51.312	Rattus_norvegicus
ENSXETG00000018276	gpatch1	100	50.586	ENSRBIG00000034723	GPATCH1	99	49.787	Rhinopithecus_bieti
ENSXETG00000018276	gpatch1	100	51.377	ENSRROG00000024428	GPATCH1	99	50.794	Rhinopithecus_roxellana
ENSXETG00000018276	gpatch1	100	50.212	ENSSBOG00000034650	GPATCH1	99	50.794	Saimiri_boliviensis_boliviensis
ENSXETG00000018276	gpatch1	99	50.785	ENSSHAG00000016016	GPATCH1	99	50.262	Sarcophilus_harrisii
ENSXETG00000018276	gpatch1	84	51.632	ENSSFOG00015011535	gpatch1	89	46.250	Scleropages_formosus
ENSXETG00000018276	gpatch1	84	45.822	ENSSMAG00000002883	gpatch1	93	41.479	Scophthalmus_maximus
ENSXETG00000018276	gpatch1	84	48.924	ENSSDUG00000007444	gpatch1	89	44.160	Seriola_dumerili
ENSXETG00000018276	gpatch1	84	50.299	ENSSLDG00000002856	gpatch1	89	46.575	Seriola_lalandi_dorsalis
ENSXETG00000018276	gpatch1	72	64.401	ENSSARG00000004108	GPATCH1	70	59.788	Sorex_araneus
ENSXETG00000018276	gpatch1	93	54.727	ENSSSCG00000002865	GPATCH1	95	52.632	Sus_scrofa
ENSXETG00000018276	gpatch1	98	54.013	ENSTGUG00000009401	GPATCH1	100	51.805	Taeniopygia_guttata
ENSXETG00000018276	gpatch1	84	46.809	ENSTRUG00000025081	gpatch1	89	42.541	Takifugu_rubripes
ENSXETG00000018276	gpatch1	84	46.747	ENSTRUG00000005785	-	89	42.541	Takifugu_rubripes
ENSXETG00000018276	gpatch1	84	48.368	ENSTNIG00000002554	gpatch1	97	45.700	Tetraodon_nigroviridis
ENSXETG00000018276	gpatch1	55	71.154	ENSTBEG00000007750	-	59	67.391	Tupaia_belangeri
ENSXETG00000018276	gpatch1	93	46.675	ENSTTRG00000012221	GPATCH1	99	45.654	Tursiops_truncatus
ENSXETG00000018276	gpatch1	93	54.083	ENSUMAG00000014645	GPATCH1	99	52.893	Ursus_maritimus
ENSXETG00000018276	gpatch1	79	70.886	ENSVPAG00000010313	GPATCH1	73	70.455	Vicugna_pacos
ENSXETG00000018276	gpatch1	93	53.979	ENSVVUG00000016572	GPATCH1	92	52.105	Vulpes_vulpes