EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000018321 (Gene tree)
Gene ID: -
Gene Symbol: hnrnph1
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 11145 bases
Position: chrGL172949.1:1144179-1155323
Accession: XB-GENE-978505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000059076	zf-RNPHF	PF08080.12	3.3e-20	1	1
ENSXETP00000039694	zf-RNPHF	PF08080.12	1.6e-09	1	1
ENSXETP00000039694	RRM_1	PF00076.22	1.2e-35	1	3
ENSXETP00000039694	RRM_1	PF00076.22	1.2e-35	2	3
ENSXETP00000039694	RRM_1	PF00076.22	1.2e-35	3	3
ENSXETP00000059076	RRM_1	PF00076.22	2.3e-35	1	3
ENSXETP00000059076	RRM_1	PF00076.22	2.3e-35	2	3
ENSXETP00000059076	RRM_1	PF00076.22	2.3e-35	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000039694	-	1394	-	ENSXETP00000039694	441 (aa)	-	F7AVZ6
ENSXETT00000066452	-	1961	-	ENSXETP00000059076	473 (aa)	-	F6SEM4

Gene Model

Click here to download ENSXETG00000018321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000018321's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000018321	hnrnph1	79	42.090	ENSXETG00000013850	grsf1	99	42.541
ENSXETG00000018321	hnrnph1	90	65.693	ENSXETG00000023567	hnrnph3	97	66.015
ENSXETG00000018321	hnrnph1	78	32.086	ENSXETG00000014694	rbm12b	95	32.086

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000018321	hnrnph1	85	78.706	ENSAPOG00000016614	hnrnph1	99	72.686	Acanthochromis_polyacanthus
ENSXETG00000018321	hnrnph1	85	78.976	ENSACIG00000008964	hnrnph1	97	77.500	Amphilophus_citrinellus
ENSXETG00000018321	hnrnph1	85	78.706	ENSAOCG00000008372	hnrnph1	99	73.288	Amphiprion_ocellaris
ENSXETG00000018321	hnrnph1	85	78.437	ENSAPEG00000012980	hnrnph1	99	73.059	Amphiprion_percula
ENSXETG00000018321	hnrnph1	85	78.706	ENSATEG00000002792	hnrnph1	99	73.288	Anabas_testudineus
ENSXETG00000018321	hnrnph1	100	79.348	ENSACAG00000016323	-	99	81.522	Anolis_carolinensis
ENSXETG00000018321	hnrnph1	83	83.471	ENSACLG00000003313	hnrnph1	96	81.471	Astatotilapia_calliptera
ENSXETG00000018321	hnrnph1	99	69.635	ENSAMXG00000030703	hnrnph1l	84	71.689	Astyanax_mexicanus
ENSXETG00000018321	hnrnph1	99	70.968	ENSAMXG00000002483	hnrnph1	97	76.250	Astyanax_mexicanus
ENSXETG00000018321	hnrnph1	80	79.827	ENSCSEG00000015891	hnrnph1	99	72.603	Cynoglossus_semilaevis
ENSXETG00000018321	hnrnph1	91	76.010	ENSCVAG00000014097	hnrnph1	99	71.493	Cyprinodon_variegatus
ENSXETG00000018321	hnrnph1	79	78.510	ENSDARG00000005551	hnrnph1l	99	73.349	Danio_rerio
ENSXETG00000018321	hnrnph1	92	74.065	ENSDARG00000040881	hnrnph1	99	74.533	Danio_rerio
ENSXETG00000018321	hnrnph1	91	69.849	ENSELUG00000021437	-	98	73.945	Esox_lucius
ENSXETG00000018321	hnrnph1	97	70.824	ENSELUG00000006715	hnrnph1	99	74.941	Esox_lucius
ENSXETG00000018321	hnrnph1	91	75.758	ENSFHEG00000008474	hnrnph1	99	71.754	Fundulus_heteroclitus
ENSXETG00000018321	hnrnph1	83	76.882	ENSGMOG00000006782	hnrnph1	96	73.171	Gadus_morhua
ENSXETG00000018321	hnrnph1	85	78.706	ENSGAFG00000006280	hnrnph1	99	72.398	Gambusia_affinis
ENSXETG00000018321	hnrnph1	83	77.285	ENSGACG00000018352	hnrnph1	96	73.775	Gasterosteus_aculeatus
ENSXETG00000018321	hnrnph1	83	83.471	ENSHBUG00000010547	hnrnph1	97	81.471	Haplochromis_burtoni
ENSXETG00000018321	hnrnph1	83	77.778	ENSHCOG00000004513	hnrnph1	99	72.045	Hippocampus_comes
ENSXETG00000018321	hnrnph1	99	71.560	ENSIPUG00000018262	hnrnph1	99	72.998	Ictalurus_punctatus
ENSXETG00000018321	hnrnph1	92	71.463	ENSIPUG00000024047	hnrnph1l	96	71.689	Ictalurus_punctatus
ENSXETG00000018321	hnrnph1	85	78.820	ENSKMAG00000018802	hnrnph1	99	71.493	Kryptolebias_marmoratus
ENSXETG00000018321	hnrnph1	85	77.898	ENSLBEG00000027811	hnrnph1	99	72.374	Labrus_bergylta
ENSXETG00000018321	hnrnph1	95	81.327	ENSLOCG00000012510	hnrnph1	99	77.419	Lepisosteus_oculatus
ENSXETG00000018321	hnrnph1	100	56.889	ENSMMUG00000017392	-	99	56.388	Macaca_mulatta
ENSXETG00000018321	hnrnph1	100	56.889	ENSMNEG00000030544	-	99	56.388	Macaca_nemestrina
ENSXETG00000018321	hnrnph1	84	80.811	ENSMAMG00000011478	hnrnph1	98	77.690	Mastacembelus_armatus
ENSXETG00000018321	hnrnph1	85	79.784	ENSMZEG00005009791	hnrnph1	99	73.303	Maylandia_zebra
ENSXETG00000018321	hnrnph1	83	79.178	ENSMMOG00000009064	hnrnph1	97	75.248	Mola_mola
ENSXETG00000018321	hnrnph1	74	56.886	ENSMODG00000002200	-	99	56.932	Monodelphis_domestica
ENSXETG00000018321	hnrnph1	83	81.593	ENSMALG00000003999	hnrnph1	98	81.868	Monopterus_albus
ENSXETG00000018321	hnrnph1	83	83.471	ENSNBRG00000015406	hnrnph1	97	81.471	Neolamprologus_brichardi
ENSXETG00000018321	hnrnph1	85	79.515	ENSONIG00000017754	hnrnph1	99	73.077	Oreochromis_niloticus
ENSXETG00000018321	hnrnph1	85	79.357	ENSORLG00000006932	hnrnph1	99	73.288	Oryzias_latipes
ENSXETG00000018321	hnrnph1	85	79.088	ENSORLG00020007881	hnrnph1	99	73.059	Oryzias_latipes_hni
ENSXETG00000018321	hnrnph1	85	79.357	ENSORLG00015005306	hnrnph1	99	73.288	Oryzias_latipes_hsok
ENSXETG00000018321	hnrnph1	85	79.088	ENSOMEG00000009827	hnrnph1	98	77.000	Oryzias_melastigma
ENSXETG00000018321	hnrnph1	86	79.427	ENSPKIG00000009532	-	99	73.154	Paramormyrops_kingsleyae
ENSXETG00000018321	hnrnph1	99	71.854	ENSPKIG00000018203	hnrnph1l	99	73.121	Paramormyrops_kingsleyae
ENSXETG00000018321	hnrnph1	92	74.500	ENSPMGG00000012151	hnrnph1	99	72.045	Periophthalmus_magnuspinnatus
ENSXETG00000018321	hnrnph1	85	78.976	ENSPFOG00000004097	hnrnph1	99	72.624	Poecilia_formosa
ENSXETG00000018321	hnrnph1	85	78.976	ENSPLAG00000011771	hnrnph1	99	72.624	Poecilia_latipinna
ENSXETG00000018321	hnrnph1	85	78.706	ENSPMEG00000019446	hnrnph1	99	72.398	Poecilia_mexicana
ENSXETG00000018321	hnrnph1	85	78.706	ENSPREG00000005780	hnrnph1	99	72.398	Poecilia_reticulata
ENSXETG00000018321	hnrnph1	83	83.471	ENSPNYG00000000204	hnrnph1	97	81.471	Pundamilia_nyererei
ENSXETG00000018321	hnrnph1	99	70.548	ENSPNAG00000002784	hnrnph1l	98	76.648	Pygocentrus_nattereri
ENSXETG00000018321	hnrnph1	99	72.018	ENSPNAG00000000439	hnrnph1	96	76.808	Pygocentrus_nattereri
ENSXETG00000018321	hnrnph1	96	76.224	ENSSFOG00015016055	-	92	77.037	Scleropages_formosus
ENSXETG00000018321	hnrnph1	95	76.429	ENSSFOG00015022796	hnrnph1l	99	75.000	Scleropages_formosus
ENSXETG00000018321	hnrnph1	83	80.220	ENSSMAG00000007820	hnrnph1	94	77.250	Scophthalmus_maximus
ENSXETG00000018321	hnrnph1	85	78.706	ENSSDUG00000008785	hnrnph1	99	73.288	Seriola_dumerili
ENSXETG00000018321	hnrnph1	85	78.706	ENSSLDG00000010685	hnrnph1	99	73.288	Seriola_lalandi_dorsalis
ENSXETG00000018321	hnrnph1	93	73.945	ENSSPAG00000009921	hnrnph1	99	73.288	Stegastes_partitus
ENSXETG00000018321	hnrnph1	85	76.344	ENSTRUG00000020069	hnrnph1	99	70.362	Takifugu_rubripes
ENSXETG00000018321	hnrnph1	85	80.429	ENSXCOG00000009133	hnrnph1	95	77.387	Xiphophorus_couchianus
ENSXETG00000018321	hnrnph1	85	78.706	ENSXMAG00000021332	hnrnph1	97	77.638	Xiphophorus_maculatus