EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000018417 (Gene tree)
Gene ID: -
Gene Symbol: sall1
Alias: -
Full Name: Xenopus tropicalis spalt-like transcription factor 1 (sall1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 19286 bases
Position: chrGL172748.1:1977852-1997137
Accession: NM_001097177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000039895	zf-C2H2	PF00096.26	8e-35	1	6
ENSXETP00000039895	zf-C2H2	PF00096.26	8e-35	2	6
ENSXETP00000039895	zf-C2H2	PF00096.26	8e-35	3	6
ENSXETP00000039895	zf-C2H2	PF00096.26	8e-35	4	6
ENSXETP00000039895	zf-C2H2	PF00096.26	8e-35	5	6
ENSXETP00000039895	zf-C2H2	PF00096.26	8e-35	6	6
ENSXETP00000039895	zf-met	PF12874.7	1e-25	1	6
ENSXETP00000039895	zf-met	PF12874.7	1e-25	2	6
ENSXETP00000039895	zf-met	PF12874.7	1e-25	3	6
ENSXETP00000039895	zf-met	PF12874.7	1e-25	4	6
ENSXETP00000039895	zf-met	PF12874.7	1e-25	5	6
ENSXETP00000039895	zf-met	PF12874.7	1e-25	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000039895	-	4817	-	ENSXETP00000039895	1330 (aa)	XP_012815812	F6ZJT4

Gene Model

Click here to download ENSXETG00000018417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000018417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000018417	sall1	56	43.939	ENSXETG00000002717	-	99	43.939
ENSXETG00000018417	sall1	56	51.923	ENSXETG00000023597	-	99	51.923
ENSXETG00000018417	sall1	55	36.047	ENSXETG00000016781	-	97	53.061
ENSXETG00000018417	sall1	56	36.585	ENSXETG00000001910	znf646	99	46.667
ENSXETG00000018417	sall1	100	63.462	ENSXETG00000000845	sall3	100	63.462
ENSXETG00000018417	sall1	55	51.064	ENSXETG00000008801	znf628	98	51.064
ENSXETG00000018417	sall1	55	55.556	ENSXETG00000006575	znf420	85	48.980
ENSXETG00000018417	sall1	55	46.000	ENSXETG00000023643	znf484	95	51.020
ENSXETG00000018417	sall1	78	61.538	ENSXETG00000017176	sall2	74	61.538
ENSXETG00000018417	sall1	56	43.333	ENSXETG00000017175	-	95	43.333
ENSXETG00000018417	sall1	95	65.068	ENSXETG00000012326	sall4	94	65.068
ENSXETG00000018417	sall1	55	44.898	ENSXETG00000027536	znf574	55	44.898

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000018417	sall1	99	75.588	ENSG00000103449	SALL1	100	77.670	Homo_sapiens
ENSXETG00000018417	sall1	100	66.324	ENSAPOG00000022764	sall1a	100	66.374	Acanthochromis_polyacanthus
ENSXETG00000018417	sall1	99	75.203	ENSAMEG00000006817	SALL1	100	75.798	Ailuropoda_melanoleuca
ENSXETG00000018417	sall1	100	65.540	ENSACIG00000004231	sall1a	100	65.467	Amphilophus_citrinellus
ENSXETG00000018417	sall1	100	66.764	ENSAOCG00000002800	sall1a	100	66.813	Amphiprion_ocellaris
ENSXETG00000018417	sall1	100	66.618	ENSAPEG00000010179	sall1a	100	66.667	Amphiprion_percula
ENSXETG00000018417	sall1	99	65.545	ENSATEG00000003006	sall1a	99	67.177	Anabas_testudineus
ENSXETG00000018417	sall1	100	79.210	ENSAPLG00000003356	SALL1	100	79.583	Anas_platyrhynchos
ENSXETG00000018417	sall1	96	77.537	ENSACAG00000014399	SALL1	96	77.340	Anolis_carolinensis
ENSXETG00000018417	sall1	99	75.755	ENSANAG00000027238	SALL1	99	76.124	Aotus_nancymaae
ENSXETG00000018417	sall1	100	65.348	ENSACLG00000017148	sall1a	100	66.801	Astatotilapia_calliptera
ENSXETG00000018417	sall1	99	50.109	ENSAMXG00000017702	sall1b	99	50.218	Astyanax_mexicanus
ENSXETG00000018417	sall1	100	65.396	ENSAMXG00000018599	sall1a	100	65.396	Astyanax_mexicanus
ENSXETG00000018417	sall1	100	75.702	ENSBTAG00000008544	SALL1	100	75.793	Bos_taurus
ENSXETG00000018417	sall1	99	75.829	ENSCJAG00000001740	SALL1	99	76.124	Callithrix_jacchus
ENSXETG00000018417	sall1	99	75.313	ENSCAFG00000009755	SALL1	100	75.773	Canis_familiaris
ENSXETG00000018417	sall1	99	75.313	ENSCAFG00020002842	SALL1	100	75.773	Canis_lupus_dingo
ENSXETG00000018417	sall1	100	75.332	ENSCHIG00000026074	SALL1	99	77.042	Capra_hircus
ENSXETG00000018417	sall1	99	76.684	ENSTSYG00000029464	SALL1	99	76.684	Carlito_syrichta
ENSXETG00000018417	sall1	96	78.278	ENSCPOG00000006564	SALL1	99	78.278	Cavia_porcellus
ENSXETG00000018417	sall1	99	72.935	ENSCCAG00000001639	SALL1	100	73.545	Cebus_capucinus
ENSXETG00000018417	sall1	99	76.310	ENSCATG00000004982	SALL1	100	76.327	Cercocebus_atys
ENSXETG00000018417	sall1	99	76.449	ENSCLAG00000006380	SALL1	100	76.370	Chinchilla_lanigera
ENSXETG00000018417	sall1	99	75.313	ENSCSAG00000005319	SALL1	100	75.331	Chlorocebus_sabaeus
ENSXETG00000018417	sall1	62	77.572	ENSCHOG00000000800	-	69	77.572	Choloepus_hoffmanni
ENSXETG00000018417	sall1	100	78.987	ENSCPBG00000015924	SALL1	100	81.399	Chrysemys_picta_bellii
ENSXETG00000018417	sall1	99	76.292	ENSCANG00000036664	SALL1	100	78.484	Colobus_angolensis_palliatus
ENSXETG00000018417	sall1	99	74.370	ENSCGRG00001023314	-	100	74.537	Cricetulus_griseus_chok1gshd
ENSXETG00000018417	sall1	96	76.102	ENSCGRG00000009496	Sall1	100	76.275	Cricetulus_griseus_crigri
ENSXETG00000018417	sall1	99	63.921	ENSCSEG00000009349	sall1a	99	64.942	Cynoglossus_semilaevis
ENSXETG00000018417	sall1	90	64.157	ENSCVAG00000020513	sall1a	99	64.128	Cyprinodon_variegatus
ENSXETG00000018417	sall1	94	47.523	ENSDARG00000075891	sall1b	97	46.417	Danio_rerio
ENSXETG00000018417	sall1	100	64.599	ENSDARG00000074319	sall1a	100	66.506	Danio_rerio
ENSXETG00000018417	sall1	99	77.151	ENSDNOG00000016413	SALL1	100	77.094	Dasypus_novemcinctus
ENSXETG00000018417	sall1	96	78.433	ENSETEG00000015150	SALL1	99	78.433	Echinops_telfairi
ENSXETG00000018417	sall1	62	43.764	ENSEBUG00000008798	SALL1	83	39.877	Eptatretus_burgeri
ENSXETG00000018417	sall1	68	55.072	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSXETG00000018417	sall1	99	76.300	ENSEASG00005014602	SALL1	100	76.318	Equus_asinus_asinus
ENSXETG00000018417	sall1	91	74.080	ENSECAG00000011334	SALL1	99	74.162	Equus_caballus
ENSXETG00000018417	sall1	96	77.262	ENSEEUG00000002014	SALL1	100	77.125	Erinaceus_europaeus
ENSXETG00000018417	sall1	100	63.554	ENSELUG00000006159	sall1a	100	64.602	Esox_lucius
ENSXETG00000018417	sall1	100	49.706	ENSELUG00000017774	-	100	49.817	Esox_lucius
ENSXETG00000018417	sall1	99	74.574	ENSFCAG00000024654	SALL1	100	76.923	Felis_catus
ENSXETG00000018417	sall1	100	79.061	ENSFALG00000000074	SALL1	100	79.061	Ficedula_albicollis
ENSXETG00000018417	sall1	100	64.792	ENSFHEG00000012579	sall1a	100	64.719	Fundulus_heteroclitus
ENSXETG00000018417	sall1	73	65.789	ENSFHEG00000008424	-	100	61.538	Fundulus_heteroclitus
ENSXETG00000018417	sall1	95	41.838	ENSGMOG00000013383	-	99	41.544	Gadus_morhua
ENSXETG00000018417	sall1	100	63.350	ENSGMOG00000006103	sall1a	100	63.416	Gadus_morhua
ENSXETG00000018417	sall1	100	79.226	ENSGALG00000039238	SALL1	100	79.210	Gallus_gallus
ENSXETG00000018417	sall1	100	65.912	ENSGAFG00000009964	sall1a	100	65.839	Gambusia_affinis
ENSXETG00000018417	sall1	99	65.201	ENSGACG00000016702	sall1a	99	65.179	Gasterosteus_aculeatus
ENSXETG00000018417	sall1	100	78.167	ENSGAGG00000013979	SALL1	100	80.658	Gopherus_agassizii
ENSXETG00000018417	sall1	99	75.809	ENSGGOG00000000663	SALL1	100	75.900	Gorilla_gorilla
ENSXETG00000018417	sall1	100	65.348	ENSHBUG00000022005	sall1a	100	66.801	Haplochromis_burtoni
ENSXETG00000018417	sall1	99	76.597	ENSHGLG00000004288	-	100	76.689	Heterocephalus_glaber_female
ENSXETG00000018417	sall1	99	76.597	ENSHGLG00100017496	SALL1	100	76.689	Heterocephalus_glaber_male
ENSXETG00000018417	sall1	100	63.358	ENSHCOG00000000974	sall1a	100	63.498	Hippocampus_comes
ENSXETG00000018417	sall1	99	47.141	ENSIPUG00000022928	sall1b	99	46.921	Ictalurus_punctatus
ENSXETG00000018417	sall1	100	65.033	ENSIPUG00000016265	SALL1	100	64.861	Ictalurus_punctatus
ENSXETG00000018417	sall1	99	75.740	ENSSTOG00000020885	SALL1	100	75.831	Ictidomys_tridecemlineatus
ENSXETG00000018417	sall1	100	65.106	ENSKMAG00000016681	sall1a	100	65.033	Kryptolebias_marmoratus
ENSXETG00000018417	sall1	98	64.296	ENSLBEG00000012207	sall1a	97	64.275	Labrus_bergylta
ENSXETG00000018417	sall1	58	41.858	ENSLACG00000014018	-	99	38.919	Latimeria_chalumnae
ENSXETG00000018417	sall1	100	73.810	ENSLACG00000003556	SALL1	100	73.661	Latimeria_chalumnae
ENSXETG00000018417	sall1	100	69.410	ENSLOCG00000007283	sall1b	100	69.394	Lepisosteus_oculatus
ENSXETG00000018417	sall1	96	77.580	ENSLAFG00000015251	SALL1	99	78.123	Loxodonta_africana
ENSXETG00000018417	sall1	99	75.938	ENSMFAG00000003298	SALL1	100	76.103	Macaca_fascicularis
ENSXETG00000018417	sall1	90	77.660	ENSMMUG00000017200	SALL1	100	78.084	Macaca_mulatta
ENSXETG00000018417	sall1	90	77.597	ENSMNEG00000034770	SALL1	100	78.021	Macaca_nemestrina
ENSXETG00000018417	sall1	99	76.366	ENSMLEG00000036406	SALL1	100	78.484	Mandrillus_leucophaeus
ENSXETG00000018417	sall1	99	66.715	ENSMAMG00000004164	sall1a	99	67.739	Mastacembelus_armatus
ENSXETG00000018417	sall1	100	65.348	ENSMZEG00005006479	sall1a	100	66.801	Maylandia_zebra
ENSXETG00000018417	sall1	96	81.415	ENSMGAG00000004704	SALL1	99	81.415	Meleagris_gallopavo
ENSXETG00000018417	sall1	100	74.016	ENSMAUG00000019093	Sall1	100	74.148	Mesocricetus_auratus
ENSXETG00000018417	sall1	100	75.908	ENSMICG00000036486	SALL1	100	75.908	Microcebus_murinus
ENSXETG00000018417	sall1	99	64.585	ENSMMOG00000016400	sall1a	99	64.563	Mola_mola
ENSXETG00000018417	sall1	99	79.077	ENSMODG00000013114	SALL1	99	79.151	Monodelphis_domestica
ENSXETG00000018417	sall1	99	64.464	ENSMALG00000013400	sall1a	99	64.464	Monopterus_albus
ENSXETG00000018417	sall1	100	73.378	MGP_CAROLIEiJ_G0031362	Sall1	100	73.599	Mus_caroli
ENSXETG00000018417	sall1	99	73.378	ENSMUSG00000031665	Sall1	100	73.324	Mus_musculus
ENSXETG00000018417	sall1	99	73.820	MGP_PahariEiJ_G0022961	Sall1	100	73.766	Mus_pahari
ENSXETG00000018417	sall1	99	73.378	MGP_SPRETEiJ_G0032480	Sall1	100	73.324	Mus_spretus
ENSXETG00000018417	sall1	96	76.584	ENSMPUG00000003265	SALL1	96	76.762	Mustela_putorius_furo
ENSXETG00000018417	sall1	96	72.762	ENSMLUG00000015541	SALL1	99	73.963	Myotis_lucifugus
ENSXETG00000018417	sall1	100	65.593	ENSNBRG00000009307	sall1a	100	67.070	Neolamprologus_brichardi
ENSXETG00000018417	sall1	95	89.385	ENSNLEG00000001008	SALL1	99	88.889	Nomascus_leucogenys
ENSXETG00000018417	sall1	99	78.853	ENSMEUG00000012206	SALL1	99	78.853	Notamacropus_eugenii
ENSXETG00000018417	sall1	79	82.159	ENSOPRG00000005645	SALL1	73	82.036	Ochotona_princeps
ENSXETG00000018417	sall1	99	76.077	ENSODEG00000003685	SALL1	100	76.021	Octodon_degus
ENSXETG00000018417	sall1	100	65.762	ENSONIG00000002831	sall1a	100	65.689	Oreochromis_niloticus
ENSXETG00000018417	sall1	86	79.245	ENSOANG00000013399	SALL1	96	84.426	Ornithorhynchus_anatinus
ENSXETG00000018417	sall1	100	65.004	ENSORLG00000013827	sall1a	99	67.672	Oryzias_latipes
ENSXETG00000018417	sall1	100	65.004	ENSORLG00020020570	sall1a	100	64.930	Oryzias_latipes_hni
ENSXETG00000018417	sall1	100	65.077	ENSORLG00015018830	sall1a	99	67.755	Oryzias_latipes_hsok
ENSXETG00000018417	sall1	100	65.373	ENSOMEG00000016043	sall1a	100	66.909	Oryzias_melastigma
ENSXETG00000018417	sall1	100	76.032	ENSOGAG00000027316	SALL1	100	76.032	Otolemur_garnettii
ENSXETG00000018417	sall1	100	71.082	ENSOARG00000017583	SALL1	100	71.060	Ovis_aries
ENSXETG00000018417	sall1	96	57.599	ENSPPAG00000035136	-	99	58.645	Pan_paniscus
ENSXETG00000018417	sall1	96	77.513	ENSPPAG00000035657	SALL1	99	77.820	Pan_paniscus
ENSXETG00000018417	sall1	100	74.519	ENSPPRG00000023283	SALL1	100	76.923	Panthera_pardus
ENSXETG00000018417	sall1	86	66.286	ENSPTIG00000013539	-	96	66.374	Panthera_tigris_altaica
ENSXETG00000018417	sall1	94	57.845	ENSPTRG00000045256	-	98	58.907	Pan_troglodytes
ENSXETG00000018417	sall1	99	75.903	ENSPTRG00000008108	SALL1	100	76.047	Pan_troglodytes
ENSXETG00000018417	sall1	99	76.292	ENSPANG00000024176	SALL1	100	76.384	Papio_anubis
ENSXETG00000018417	sall1	100	62.546	ENSPKIG00000022251	sall1a	100	62.767	Paramormyrops_kingsleyae
ENSXETG00000018417	sall1	100	62.694	ENSPKIG00000005383	-	100	62.694	Paramormyrops_kingsleyae
ENSXETG00000018417	sall1	100	79.195	ENSPSIG00000008582	SALL1	100	79.195	Pelodiscus_sinensis
ENSXETG00000018417	sall1	99	63.623	ENSPMGG00000021788	sall1a	99	63.844	Periophthalmus_magnuspinnatus
ENSXETG00000018417	sall1	99	78.928	ENSPCIG00000017840	SALL1	99	78.928	Phascolarctos_cinereus
ENSXETG00000018417	sall1	96	66.793	ENSPFOG00000015799	sall1a	96	66.440	Poecilia_formosa
ENSXETG00000018417	sall1	100	65.598	ENSPLAG00000022539	sall1a	100	65.265	Poecilia_latipinna
ENSXETG00000018417	sall1	100	65.743	ENSPMEG00000020894	sall1a	100	65.410	Poecilia_mexicana
ENSXETG00000018417	sall1	100	65.716	ENSPREG00000006802	sall1a	99	67.333	Poecilia_reticulata
ENSXETG00000018417	sall1	90	74.629	ENSPPYG00000007345	SALL1	96	74.629	Pongo_abelii
ENSXETG00000018417	sall1	85	78.536	ENSPCAG00000008162	SALL1	92	78.734	Procavia_capensis
ENSXETG00000018417	sall1	100	75.870	ENSPCOG00000028192	SALL1	100	76.405	Propithecus_coquereli
ENSXETG00000018417	sall1	70	78.271	ENSPVAG00000015374	SALL1	100	78.505	Pteropus_vampyrus
ENSXETG00000018417	sall1	100	65.421	ENSPNYG00000010865	sall1a	100	66.882	Pundamilia_nyererei
ENSXETG00000018417	sall1	100	63.716	ENSPNAG00000023644	sall1a	100	63.716	Pygocentrus_nattereri
ENSXETG00000018417	sall1	99	49.015	ENSPNAG00000007442	sall1b	99	49.015	Pygocentrus_nattereri
ENSXETG00000018417	sall1	100	73.314	ENSRNOG00000013907	Sall1	100	73.610	Rattus_norvegicus
ENSXETG00000018417	sall1	90	77.868	ENSRBIG00000015707	SALL1	100	78.293	Rhinopithecus_bieti
ENSXETG00000018417	sall1	96	77.667	ENSRROG00000035777	SALL1	100	78.310	Rhinopithecus_roxellana
ENSXETG00000018417	sall1	99	75.350	ENSSBOG00000032186	SALL1	99	75.791	Saimiri_boliviensis_boliviensis
ENSXETG00000018417	sall1	99	78.332	ENSSHAG00000009477	SALL1	99	78.332	Sarcophilus_harrisii
ENSXETG00000018417	sall1	100	63.127	ENSSFOG00015020020	sall1a	100	63.201	Scleropages_formosus
ENSXETG00000018417	sall1	95	65.358	ENSSFOG00015001590	sall1a	98	65.358	Scleropages_formosus
ENSXETG00000018417	sall1	99	65.520	ENSSMAG00000009160	sall1a	99	65.447	Scophthalmus_maximus
ENSXETG00000018417	sall1	85	59.184	ENSSDUG00000000748	sall1b	95	59.184	Seriola_dumerili
ENSXETG00000018417	sall1	99	65.934	ENSSDUG00000006507	sall1a	99	67.690	Seriola_dumerili
ENSXETG00000018417	sall1	99	65.934	ENSSLDG00000017721	sall1a	99	66.081	Seriola_lalandi_dorsalis
ENSXETG00000018417	sall1	96	77.519	ENSSARG00000000661	SALL1	100	77.537	Sorex_araneus
ENSXETG00000018417	sall1	100	78.779	ENSSPUG00000000156	SALL1	100	79.151	Sphenodon_punctatus
ENSXETG00000018417	sall1	100	66.691	ENSSPAG00000021615	sall1a	100	66.813	Stegastes_partitus
ENSXETG00000018417	sall1	99	75.276	ENSSSCG00000002836	SALL1	100	75.294	Sus_scrofa
ENSXETG00000018417	sall1	100	79.210	ENSTGUG00000007514	SALL1	100	79.210	Taeniopygia_guttata
ENSXETG00000018417	sall1	92	63.171	ENSTRUG00000008950	sall1a	100	62.960	Takifugu_rubripes
ENSXETG00000018417	sall1	92	62.910	ENSTNIG00000004257	sall1a	100	63.099	Tetraodon_nigroviridis
ENSXETG00000018417	sall1	77	85.616	ENSTBEG00000002119	-	53	85.616	Tupaia_belangeri
ENSXETG00000018417	sall1	90	74.442	ENSUAMG00000023379	-	92	74.442	Ursus_americanus
ENSXETG00000018417	sall1	90	73.849	ENSVVUG00000019383	-	99	74.178	Vulpes_vulpes
ENSXETG00000018417	sall1	100	65.816	ENSXMAG00000016273	sall1a	100	67.068	Xiphophorus_maculatus