EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000018605 (Gene tree)
Gene ID: -
Gene Symbol: sept2-a
Alias: sept2
Full Name: Xenopus tropicalis septin-2A (sept2-a)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 48008 bases
Position: chrGL172648.1:3106987-3154994
Accession: NM_001017039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000040281	MMR_HSR1	PF01926.23	1.4e-08	1	1
ENSXETP00000062024	MMR_HSR1	PF01926.23	2.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000040281	-	1631	-	ENSXETP00000040281	350 (aa)	XP_012818671	Q5BKN4
ENSXETT00000061550	-	1080	-	ENSXETP00000062024	360 (aa)	-	F6ZL92

Gene Model

Click here to download ENSXETG00000018605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000018605's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000018605	sept2-a	96	57.341	ENSXETG00000030888	sept5	93	60.756
ENSXETG00000018605	sept2-a	91	41.791	ENSXETG00000030617	SEPT8	67	41.791
ENSXETG00000018605	sept2-a	83	48.630	ENSXETG00000012261	sept9	52	48.630
ENSXETG00000018605	sept2-a	95	57.500	ENSXETG00000030625	SEPT4	94	57.500
ENSXETG00000018605	sept2-a	85	48.355	ENSXETG00000000261	sept3	86	48.355
ENSXETG00000018605	sept2-a	84	43.098	ENSXETG00000013836	sept10	64	43.098
ENSXETG00000018605	sept2-a	83	63.448	ENSXETG00000013112	sept7	67	61.258
ENSXETG00000018605	sept2-a	83	48.805	ENSXETG00000009151	sept12	88	48.805
ENSXETG00000018605	sept2-a	91	40.533	ENSXETG00000006404	sept11	80	39.394
ENSXETG00000018605	sept2-a	99	84.393	ENSXETG00000012166	sept2	97	84.928

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000018605	sept2-a	99	94.493	ENSAPOG00000021616	zgc:63587	99	94.493	Acanthochromis_polyacanthus
ENSXETG00000018605	sept2-a	87	95.425	ENSACIG00000006540	zgc:63587	99	95.425	Amphilophus_citrinellus
ENSXETG00000018605	sept2-a	99	94.203	ENSAOCG00000015026	zgc:63587	99	94.203	Amphiprion_ocellaris
ENSXETG00000018605	sept2-a	99	94.203	ENSAPEG00000017625	zgc:63587	99	94.203	Amphiprion_percula
ENSXETG00000018605	sept2-a	99	93.913	ENSATEG00000020519	zgc:63587	99	93.913	Anabas_testudineus
ENSXETG00000018605	sept2-a	99	96.848	ENSACAG00000000754	-	100	96.848	Anolis_carolinensis
ENSXETG00000018605	sept2-a	99	94.783	ENSACLG00000011287	zgc:63587	99	94.783	Astatotilapia_calliptera
ENSXETG00000018605	sept2-a	99	93.948	ENSAMXG00000006164	zgc:63587	96	93.948	Astyanax_mexicanus
ENSXETG00000018605	sept2-a	99	98.281	ENSCPBG00000010648	-	100	98.281	Chrysemys_picta_bellii
ENSXETG00000018605	sept2-a	99	93.931	ENSCSEG00000019626	zgc:63587	99	93.931	Cynoglossus_semilaevis
ENSXETG00000018605	sept2-a	99	93.623	ENSCVAG00000017959	zgc:63587	99	93.623	Cyprinodon_variegatus
ENSXETG00000018605	sept2-a	67	91.597	ENSDARG00000017140	zgc:63587	86	91.597	Danio_rerio
ENSXETG00000018605	sept2-a	99	94.493	ENSELUG00000009060	zgc:63587	99	94.493	Esox_lucius
ENSXETG00000018605	sept2-a	99	97.983	ENSFALG00000008010	-	99	97.983	Ficedula_albicollis
ENSXETG00000018605	sept2-a	99	93.623	ENSFHEG00000018583	zgc:63587	99	93.623	Fundulus_heteroclitus
ENSXETG00000018605	sept2-a	99	93.623	ENSGMOG00000013563	zgc:63587	99	93.623	Gadus_morhua
ENSXETG00000018605	sept2-a	99	97.983	ENSGALG00000001652	SEPT2L	99	97.983	Gallus_gallus
ENSXETG00000018605	sept2-a	99	93.623	ENSGAFG00000000805	zgc:63587	99	93.623	Gambusia_affinis
ENSXETG00000018605	sept2-a	99	93.623	ENSGACG00000005552	zgc:63587	99	93.623	Gasterosteus_aculeatus
ENSXETG00000018605	sept2-a	99	98.281	ENSGAGG00000014380	-	100	98.281	Gopherus_agassizii
ENSXETG00000018605	sept2-a	99	94.783	ENSHBUG00000013996	zgc:63587	99	94.783	Haplochromis_burtoni
ENSXETG00000018605	sept2-a	99	94.493	ENSHCOG00000005893	zgc:63587	99	94.493	Hippocampus_comes
ENSXETG00000018605	sept2-a	99	92.775	ENSKMAG00000003351	zgc:63587	99	92.775	Kryptolebias_marmoratus
ENSXETG00000018605	sept2-a	99	93.043	ENSLBEG00000025452	zgc:63587	99	93.043	Labrus_bergylta
ENSXETG00000018605	sept2-a	100	90.571	ENSLACG00000015335	zgc:63587	100	90.571	Latimeria_chalumnae
ENSXETG00000018605	sept2-a	99	93.983	ENSLOCG00000001793	zgc:63587	100	93.983	Lepisosteus_oculatus
ENSXETG00000018605	sept2-a	99	95.072	ENSMAMG00000014467	zgc:63587	99	95.072	Mastacembelus_armatus
ENSXETG00000018605	sept2-a	99	94.783	ENSMZEG00005009713	zgc:63587	99	94.783	Maylandia_zebra
ENSXETG00000018605	sept2-a	99	85.260	ENSMGAG00000001294	-	99	85.260	Meleagris_gallopavo
ENSXETG00000018605	sept2-a	91	94.375	ENSMMOG00000011692	zgc:63587	91	94.375	Mola_mola
ENSXETG00000018605	sept2-a	99	92.000	ENSMODG00000010193	-	95	92.000	Monodelphis_domestica
ENSXETG00000018605	sept2-a	87	94.444	ENSMALG00000020157	zgc:63587	99	94.444	Monopterus_albus
ENSXETG00000018605	sept2-a	99	94.783	ENSNBRG00000018582	-	99	94.783	Neolamprologus_brichardi
ENSXETG00000018605	sept2-a	99	94.203	ENSONIG00000014408	zgc:63587	99	94.203	Oreochromis_niloticus
ENSXETG00000018605	sept2-a	99	93.043	ENSORLG00000002669	zgc:63587	99	93.043	Oryzias_latipes
ENSXETG00000018605	sept2-a	99	93.043	ENSORLG00020005356	zgc:63587	99	93.043	Oryzias_latipes_hni
ENSXETG00000018605	sept2-a	99	93.043	ENSORLG00015015159	zgc:63587	99	93.043	Oryzias_latipes_hsok
ENSXETG00000018605	sept2-a	99	93.043	ENSOMEG00000017925	zgc:63587	99	93.043	Oryzias_melastigma
ENSXETG00000018605	sept2-a	99	93.983	ENSPKIG00000024604	zgc:63587	100	93.983	Paramormyrops_kingsleyae
ENSXETG00000018605	sept2-a	99	97.421	ENSPSIG00000002946	-	100	97.421	Pelodiscus_sinensis
ENSXETG00000018605	sept2-a	88	93.204	ENSPMGG00000018374	zgc:63587	99	93.204	Periophthalmus_magnuspinnatus
ENSXETG00000018605	sept2-a	100	93.714	ENSPCIG00000025491	-	100	93.714	Phascolarctos_cinereus
ENSXETG00000018605	sept2-a	99	93.913	ENSPFOG00000011730	zgc:63587	99	93.913	Poecilia_formosa
ENSXETG00000018605	sept2-a	99	93.913	ENSPLAG00000018604	zgc:63587	99	93.913	Poecilia_latipinna
ENSXETG00000018605	sept2-a	99	93.623	ENSPMEG00000004117	zgc:63587	99	93.623	Poecilia_mexicana
ENSXETG00000018605	sept2-a	99	93.333	ENSPREG00000011612	zgc:63587	99	93.333	Poecilia_reticulata
ENSXETG00000018605	sept2-a	99	94.493	ENSPNYG00000008409	zgc:63587	99	94.493	Pundamilia_nyererei
ENSXETG00000018605	sept2-a	99	93.948	ENSPNAG00000000463	zgc:63587	88	93.009	Pygocentrus_nattereri
ENSXETG00000018605	sept2-a	99	92.550	ENSSHAG00000011013	-	100	92.550	Sarcophilus_harrisii
ENSXETG00000018605	sept2-a	99	94.524	ENSSFOG00015014108	zgc:63587	99	94.524	Scleropages_formosus
ENSXETG00000018605	sept2-a	98	93.895	ENSSMAG00000006113	-	99	93.895	Scophthalmus_maximus
ENSXETG00000018605	sept2-a	97	94.083	ENSSDUG00000002763	zgc:63587	94	94.675	Seriola_dumerili
ENSXETG00000018605	sept2-a	99	94.203	ENSSLDG00000004826	zgc:63587	99	94.203	Seriola_lalandi_dorsalis
ENSXETG00000018605	sept2-a	99	97.421	ENSSPUG00000015358	-	100	97.421	Sphenodon_punctatus
ENSXETG00000018605	sept2-a	99	94.493	ENSSPAG00000015654	-	99	94.493	Stegastes_partitus
ENSXETG00000018605	sept2-a	57	95.455	ENSSPAG00000000807	zgc:63587	63	95.455	Stegastes_partitus
ENSXETG00000018605	sept2-a	99	97.695	ENSTGUG00000008445	-	99	97.695	Taeniopygia_guttata
ENSXETG00000018605	sept2-a	99	94.203	ENSTRUG00000016492	zgc:63587	99	94.203	Takifugu_rubripes
ENSXETG00000018605	sept2-a	99	93.623	ENSTNIG00000015927	zgc:63587	99	93.623	Tetraodon_nigroviridis
ENSXETG00000018605	sept2-a	95	92.492	ENSXCOG00000002678	zgc:63587	99	92.492	Xiphophorus_couchianus
ENSXETG00000018605	sept2-a	99	93.623	ENSXMAG00000014718	zgc:63587	99	93.623	Xiphophorus_maculatus