EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXETG00000018640 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Xenopus_tropicalis
Status
putative
Strand
Minus strand
Length
12406 bases
Position
chrGL173666.1:80781-93186
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXETP00000040350tRNA_SADPF07973.141.5e-1111
ENSXETP00000040350HGTP_anticodonPF03129.201.5e-1611
ENSXETP00000040350tRNA-synt_2bPF00587.253.3e-2811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXETT00000040350-2034-ENSXETP00000040350677 (aa)-F7BAE6
Gene Model
Click here to download ENSXETG00000018640's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000018640's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXETG00000018640-10062.647ENSXETG00000009868tars9462.647
ENSXETG00000018640-9962.629ENSXETG00000020313tarsl28362.629
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXETG00000018640-9963.368ENSG00000113407TARS9363.368Homo_sapiens
ENSXETG00000018640-8363.204ENSAPOG00000021756tarsl210063.204Acanthochromis_polyacanthus
ENSXETG00000018640-9963.274ENSAPOG00000013465tars9363.274Acanthochromis_polyacanthus
ENSXETG00000018640-8360.167ENSAMEG00000003451TARS9260.167Ailuropoda_melanoleuca
ENSXETG00000018640-9961.267ENSACIG00000005189tarsl29661.267Amphilophus_citrinellus
ENSXETG00000018640-9959.084ENSACIG00000015719tars9965.367Amphilophus_citrinellus
ENSXETG00000018640-9960.767ENSAOCG00000009313tarsl210058.867Amphiprion_ocellaris
ENSXETG00000018640-9963.274ENSAOCG00000023847tars9363.274Amphiprion_ocellaris
ENSXETG00000018640-9963.274ENSAPEG00000013710tars9363.274Amphiprion_percula
ENSXETG00000018640-9960.767ENSAPEG00000007987tarsl29760.767Amphiprion_percula
ENSXETG00000018640-9963.717ENSATEG00000023154tars9363.717Anabas_testudineus
ENSXETG00000018640-10062.115ENSATEG00000004034tarsl28362.115Anabas_testudineus
ENSXETG00000018640-9962.925ENSAPLG00000016069TARS9862.925Anas_platyrhynchos
ENSXETG00000018640-9963.516ENSANAG00000020786TARS9363.516Aotus_nancymaae
ENSXETG00000018640-9961.119ENSACLG00000018601tarsl28361.119Astatotilapia_calliptera
ENSXETG00000018640-9962.979ENSACLG00000018603tars9762.979Astatotilapia_calliptera
ENSXETG00000018640-9964.254ENSAMXG00000014068tars9364.254Astyanax_mexicanus
ENSXETG00000018640-10061.933ENSAMXG00000020852tarsl27961.933Astyanax_mexicanus
ENSXETG00000018640-9963.811ENSBTAG00000014261TARS9363.811Bos_taurus
ENSXETG00000018640-9963.072ENSCJAG00000018663TARS9363.072Callithrix_jacchus
ENSXETG00000018640-9963.220ENSCAFG00000018858TARS9363.220Canis_familiaris
ENSXETG00000018640-9963.220ENSCAFG00020016830TARS9363.220Canis_lupus_dingo
ENSXETG00000018640-9963.959ENSCHIG00000013566TARS9763.959Capra_hircus
ENSXETG00000018640-9963.072ENSTSYG00000010851TARS9363.072Carlito_syrichta
ENSXETG00000018640-9950.885ENSCAPG00000011392TARS9950.885Cavia_aperea
ENSXETG00000018640-9963.516ENSCPOG00000014012TARS9063.516Cavia_porcellus
ENSXETG00000018640-9963.368ENSCCAG00000019805TARS9363.368Cebus_capucinus
ENSXETG00000018640-9963.368ENSCATG00000038037TARS9363.368Cercocebus_atys
ENSXETG00000018640-9963.368ENSCLAG00000008983TARS9363.368Chinchilla_lanigera
ENSXETG00000018640-9963.368ENSCSAG00000017162TARS9363.368Chlorocebus_sabaeus
ENSXETG00000018640-8262.143ENSCHOG00000005325-8562.143Choloepus_hoffmanni
ENSXETG00000018640-9165.260ENSCHOG00000013155-9965.260Choloepus_hoffmanni
ENSXETG00000018640-9963.072ENSCPBG00000013172TARS9863.072Chrysemys_picta_bellii
ENSXETG00000018640-9967.548ENSCPBG00000008240-9667.548Chrysemys_picta_bellii
ENSXETG00000018640-9159.289ENSCING00000004310-9859.289Ciona_intestinalis
ENSXETG00000018640-9963.516ENSCANG00000031774TARS9363.516Colobus_angolensis_palliatus
ENSXETG00000018640-9963.368ENSCGRG00001022888Tars9763.368Cricetulus_griseus_chok1gshd
ENSXETG00000018640-9963.368ENSCGRG00000000978Tars9763.368Cricetulus_griseus_crigri
ENSXETG00000018640-10061.437ENSCSEG00000011120tarsl28861.437Cynoglossus_semilaevis
ENSXETG00000018640-9964.454ENSCSEG00000007462tars9364.454Cynoglossus_semilaevis
ENSXETG00000018640-9963.959ENSCVAG00000012329tars9860.709Cyprinodon_variegatus
ENSXETG00000018640-9961.947ENSCVAG00000009572tarsl28461.947Cyprinodon_variegatus
ENSXETG00000018640-9963.959ENSDARG00000013250tars9463.959Danio_rerio
ENSXETG00000018640-6465.367ENSDARG00000092774tarsl29965.367Danio_rerio
ENSXETG00000018640-9962.094ENSDNOG00000017275TARS9362.094Dasypus_novemcinctus
ENSXETG00000018640-9963.368ENSDORG00000008801Tars9863.368Dipodomys_ordii
ENSXETG00000018640-9861.145ENSETEG00000006292TARS9361.145Echinops_telfairi
ENSXETG00000018640-9963.127ENSEBUG00000010935tarsl29463.127Eptatretus_burgeri
ENSXETG00000018640-9963.516ENSEASG00005015075TARS10063.772Equus_asinus_asinus
ENSXETG00000018640-9963.516ENSECAG00000020854TARS9363.516Equus_caballus
ENSXETG00000018640-9956.278ENSEEUG00000005701TARS9356.278Erinaceus_europaeus
ENSXETG00000018640-9960.857ENSELUG00000011403tars9766.258Esox_lucius
ENSXETG00000018640-10060.793ENSELUG00000007414tarsl210059.762Esox_lucius
ENSXETG00000018640-9963.220ENSFCAG00000002351TARS9363.220Felis_catus
ENSXETG00000018640-9963.368ENSFALG00000002131TARS9363.368Ficedula_albicollis
ENSXETG00000018640-9961.834ENSFDAG00000005928TARS10061.834Fukomys_damarensis
ENSXETG00000018640-9961.504ENSFHEG00000010406tarsl210061.493Fundulus_heteroclitus
ENSXETG00000018640-9963.274ENSFHEG00000004551tars9363.274Fundulus_heteroclitus
ENSXETG00000018640-9952.290ENSGMOG00000013046tars9952.290Gadus_morhua
ENSXETG00000018640-9952.507ENSGMOG00000002140tarsl29752.802Gadus_morhua
ENSXETG00000018640-9963.220ENSGALG00000003288TARS8563.220Gallus_gallus
ENSXETG00000018640-9662.634ENSGAFG00000009417tarsl27862.634Gambusia_affinis
ENSXETG00000018640-9860.778ENSGAFG00000017077tars10060.778Gambusia_affinis
ENSXETG00000018640-9963.717ENSGACG00000004921tars9563.717Gasterosteus_aculeatus
ENSXETG00000018640-10061.290ENSGACG00000014631tarsl29761.290Gasterosteus_aculeatus
ENSXETG00000018640-9966.373ENSGAGG00000001743-9666.373Gopherus_agassizii
ENSXETG00000018640-9963.368ENSGAGG00000019945TARS9563.368Gopherus_agassizii
ENSXETG00000018640-9963.220ENSGGOG00000014336TARS9663.220Gorilla_gorilla
ENSXETG00000018640-9961.119ENSHBUG00000020986tarsl28361.119Haplochromis_burtoni
ENSXETG00000018640-9962.979ENSHBUG00000011236tars9362.979Haplochromis_burtoni
ENSXETG00000018640-9962.629ENSHGLG00000004347TARS9362.629Heterocephalus_glaber_female
ENSXETG00000018640-9962.629ENSHGLG00100016510-9362.629Heterocephalus_glaber_male
ENSXETG00000018640-9549.307ENSHGLG00100009436-9349.307Heterocephalus_glaber_male
ENSXETG00000018640-9949.633ENSHCOG00000019262tars9849.633Hippocampus_comes
ENSXETG00000018640-10062.115ENSHCOG00000001263tarsl29967.277Hippocampus_comes
ENSXETG00000018640-9963.516ENSIPUG00000012104tars9363.516Ictalurus_punctatus
ENSXETG00000018640-10061.821ENSIPUG00000010218tarsl28261.821Ictalurus_punctatus
ENSXETG00000018640-9963.220ENSSTOG00000000811TARS9863.220Ictidomys_tridecemlineatus
ENSXETG00000018640-9963.072ENSJJAG00000012711Tars9763.072Jaculus_jaculus
ENSXETG00000018640-9961.652ENSKMAG00000001740tarsl29961.652Kryptolebias_marmoratus
ENSXETG00000018640-9963.368ENSKMAG00000006120tars9363.368Kryptolebias_marmoratus
ENSXETG00000018640-9962.003ENSLBEG00000018541tarsl210060.119Labrus_bergylta
ENSXETG00000018640-9963.717ENSLBEG00000014334tars9363.717Labrus_bergylta
ENSXETG00000018640-9958.482ENSLBEG00000018238-10058.482Labrus_bergylta
ENSXETG00000018640-9963.220ENSLACG00000009316TARS9462.736Latimeria_chalumnae
ENSXETG00000018640-9962.242ENSLACG00000018690-8662.242Latimeria_chalumnae
ENSXETG00000018640-10052.616ENSLACG00000008719-9352.762Latimeria_chalumnae
ENSXETG00000018640-7058.836ENSLOCG00000014607tarsl26258.383Lepisosteus_oculatus
ENSXETG00000018640-9963.127ENSLOCG00000011402tars9363.127Lepisosteus_oculatus
ENSXETG00000018640-9962.925ENSLAFG00000009855TARS9362.925Loxodonta_africana
ENSXETG00000018640-9963.368ENSMFAG00000043658TARS9363.368Macaca_fascicularis
ENSXETG00000018640-9963.368ENSMMUG00000016224TARS9763.368Macaca_mulatta
ENSXETG00000018640-9963.368ENSMNEG00000035174TARS9363.368Macaca_nemestrina
ENSXETG00000018640-9959.151ENSMLEG00000037573TARS10061.606Mandrillus_leucophaeus
ENSXETG00000018640-9963.717ENSMAMG00000007405tars9363.717Mastacembelus_armatus
ENSXETG00000018640-10060.646ENSMAMG00000005294tarsl28260.646Mastacembelus_armatus
ENSXETG00000018640-9961.267ENSMZEG00005005731tarsl28361.267Maylandia_zebra
ENSXETG00000018640-9962.979ENSMZEG00005012967tars9362.979Maylandia_zebra
ENSXETG00000018640-9934.101ENSMGAG00000002934-9534.101Meleagris_gallopavo
ENSXETG00000018640-9963.220ENSMICG00000005593TARS10066.314Microcebus_murinus
ENSXETG00000018640-9962.777ENSMOCG00000002397Tars9761.696Microtus_ochrogaster
ENSXETG00000018640-8362.742ENSMMOG00000016276tarsl210062.742Mola_mola
ENSXETG00000018640-9863.814ENSMMOG00000017581tars10063.814Mola_mola
ENSXETG00000018640-9963.368ENSMODG00000020405TARS9363.368Monodelphis_domestica
ENSXETG00000018640-9961.504ENSMALG00000014473tarsl27861.504Monopterus_albus
ENSXETG00000018640-9963.422ENSMALG00000001448tars9363.422Monopterus_albus
ENSXETG00000018640-9963.368MGP_CAROLIEiJ_G0019674Tars9363.368Mus_caroli
ENSXETG00000018640-9963.516ENSMUSG00000022241Tars9363.516Mus_musculus
ENSXETG00000018640-9963.368MGP_PahariEiJ_G0016054Tars9363.368Mus_pahari
ENSXETG00000018640-9963.663MGP_SPRETEiJ_G0020571Tars9069.388Mus_spretus
ENSXETG00000018640-9963.516ENSMPUG00000015177TARS9363.516Mustela_putorius_furo
ENSXETG00000018640-9963.663ENSMLUG00000011189TARS9363.663Myotis_lucifugus
ENSXETG00000018640-9963.663ENSNGAG00000021115Tars9763.663Nannospalax_galili
ENSXETG00000018640-5460.218ENSNBRG00000008049-7660.218Neolamprologus_brichardi
ENSXETG00000018640-9962.832ENSNBRG00000022198tars9362.832Neolamprologus_brichardi
ENSXETG00000018640-9963.072ENSNLEG00000014187TARS10063.018Nomascus_leucogenys
ENSXETG00000018640-8458.172ENSMEUG00000002186-10058.172Notamacropus_eugenii
ENSXETG00000018640-9460.062ENSMEUG00000011216-9960.062Notamacropus_eugenii
ENSXETG00000018640-9958.936ENSOPRG00000003544TARS9358.936Ochotona_princeps
ENSXETG00000018640-9562.519ENSODEG00000011907-10062.519Octodon_degus
ENSXETG00000018640-8961.614ENSODEG00000002089-9162.988Octodon_degus
ENSXETG00000018640-9961.708ENSONIG00000002904tarsl28561.708Oreochromis_niloticus
ENSXETG00000018640-9963.181ENSONIG00000016982tars9363.181Oreochromis_niloticus
ENSXETG00000018640-9963.220ENSOANG00000014432TARS9463.220Ornithorhynchus_anatinus
ENSXETG00000018640-9963.368ENSOCUG00000000684TARS9363.368Oryctolagus_cuniculus
ENSXETG00000018640-9962.979ENSORLG00000001603tars9362.979Oryzias_latipes
ENSXETG00000018640-9961.209ENSORLG00000014313tarsl28761.209Oryzias_latipes
ENSXETG00000018640-9962.979ENSORLG00020008243tars9362.979Oryzias_latipes_hni
ENSXETG00000018640-9961.209ENSORLG00020019614tarsl210059.403Oryzias_latipes_hni
ENSXETG00000018640-9962.979ENSORLG00015000487tars9362.979Oryzias_latipes_hsok
ENSXETG00000018640-9961.504ENSORLG00015017865tarsl28761.504Oryzias_latipes_hsok
ENSXETG00000018640-9961.504ENSOMEG00000017135tarsl28361.504Oryzias_melastigma
ENSXETG00000018640-9963.569ENSOMEG00000013835tars9363.569Oryzias_melastigma
ENSXETG00000018640-9963.368ENSOGAG00000009129TARS9363.368Otolemur_garnettii
ENSXETG00000018640-9963.959ENSOARG00000012085TARS9363.959Ovis_aries
ENSXETG00000018640-9963.368ENSPPAG00000021251TARS9363.368Pan_paniscus
ENSXETG00000018640-9963.220ENSPPRG00000009764TARS9363.220Panthera_pardus
ENSXETG00000018640-9963.220ENSPTIG00000020328TARS9363.220Panthera_tigris_altaica
ENSXETG00000018640-9963.368ENSPTRG00000016775TARS9363.368Pan_troglodytes
ENSXETG00000018640-9963.368ENSPANG00000011000TARS9363.368Papio_anubis
ENSXETG00000018640-9960.619ENSPKIG00000020010tarsl28360.619Paramormyrops_kingsleyae
ENSXETG00000018640-9964.478ENSPKIG00000010725tars10064.478Paramormyrops_kingsleyae
ENSXETG00000018640-9667.428ENSPSIG00000015501-9967.428Pelodiscus_sinensis
ENSXETG00000018640-9963.220ENSPSIG00000015697TARS7563.220Pelodiscus_sinensis
ENSXETG00000018640-8364.613ENSPMGG00000006955tarsl210064.613Periophthalmus_magnuspinnatus
ENSXETG00000018640-9964.328ENSPMGG00000012642tars10064.328Periophthalmus_magnuspinnatus
ENSXETG00000018640-9962.925ENSPEMG00000024237Tars9761.224Peromyscus_maniculatus_bairdii
ENSXETG00000018640-9962.832ENSPMAG00000004957tarsl28262.832Petromyzon_marinus
ENSXETG00000018640-9664.482ENSPCIG00000016353TARS10064.482Phascolarctos_cinereus
ENSXETG00000018640-9963.569ENSPFOG00000010429tars9363.569Poecilia_formosa
ENSXETG00000018640-9961.947ENSPFOG00000013908tarsl28361.947Poecilia_formosa
ENSXETG00000018640-9961.947ENSPLAG00000011183tarsl28561.947Poecilia_latipinna
ENSXETG00000018640-9863.827ENSPLAG00000008773tars10063.827Poecilia_latipinna
ENSXETG00000018640-9963.569ENSPMEG00000016101tars9363.569Poecilia_mexicana
ENSXETG00000018640-9961.947ENSPMEG00000011154tarsl28361.947Poecilia_mexicana
ENSXETG00000018640-9959.084ENSPREG00000008101tarsl210059.084Poecilia_reticulata
ENSXETG00000018640-9963.569ENSPREG00000008856tars9363.569Poecilia_reticulata
ENSXETG00000018640-9265.008ENSPPYG00000015382TARS10065.008Pongo_abelii
ENSXETG00000018640-7560.197ENSPCAG00000006885TARS7960.197Procavia_capensis
ENSXETG00000018640-9952.802ENSPCOG00000019044TARS9553.540Propithecus_coquereli
ENSXETG00000018640-9962.925ENSPVAG00000008939TARS9362.925Pteropus_vampyrus
ENSXETG00000018640-9962.979ENSPNYG00000003864tars9362.979Pundamilia_nyererei
ENSXETG00000018640-9958.929ENSPNYG00000009768tarsl210058.929Pundamilia_nyererei
ENSXETG00000018640-9964.106ENSPNAG00000014293tars9364.106Pygocentrus_nattereri
ENSXETG00000018640-9962.059ENSPNAG00000015361tarsl28162.059Pygocentrus_nattereri
ENSXETG00000018640-9963.516ENSRNOG00000019023Tars9763.516Rattus_norvegicus
ENSXETG00000018640-9963.663ENSRBIG00000009935TARS9363.663Rhinopithecus_bieti
ENSXETG00000018640-9963.663ENSRROG00000030698TARS9363.663Rhinopithecus_roxellana
ENSXETG00000018640-9963.368ENSSBOG00000021854TARS9363.368Saimiri_boliviensis_boliviensis
ENSXETG00000018640-6165.133ENSSHAG00000011084TARS9665.133Sarcophilus_harrisii
ENSXETG00000018640-9963.864ENSSFOG00015015118tars9363.864Scleropages_formosus
ENSXETG00000018640-9560.802ENSSFOG00015017057tarsl28460.802Scleropages_formosus
ENSXETG00000018640-10061.527ENSSMAG00000009984tarsl28361.527Scophthalmus_maximus
ENSXETG00000018640-9963.274ENSSMAG00000009718tars9363.274Scophthalmus_maximus
ENSXETG00000018640-9964.307ENSSDUG00000014184tars9761.947Seriola_dumerili
ENSXETG00000018640-10061.380ENSSDUG00000007476tarsl28361.380Seriola_dumerili
ENSXETG00000018640-9964.307ENSSLDG00000020363tars9364.307Seriola_lalandi_dorsalis
ENSXETG00000018640-10061.527ENSSLDG00000016574tarsl28361.527Seriola_lalandi_dorsalis
ENSXETG00000018640-7466.000ENSSARG00000009829TARS7966.000Sorex_araneus
ENSXETG00000018640-9161.526ENSSPUG00000000604-9468.788Sphenodon_punctatus
ENSXETG00000018640-9963.220ENSSPUG00000016844TARS9863.220Sphenodon_punctatus
ENSXETG00000018640-10060.997ENSSPAG00000020448tarsl28360.997Stegastes_partitus
ENSXETG00000018640-9264.172ENSSPAG00000019655tars8864.172Stegastes_partitus
ENSXETG00000018640-9864.126ENSSSCG00000016817TARS10064.126Sus_scrofa
ENSXETG00000018640-9963.368ENSTGUG00000001925TARS9563.368Taeniopygia_guttata
ENSXETG00000018640-9963.663ENSTRUG00000002380tars9363.663Takifugu_rubripes
ENSXETG00000018640-6465.760ENSTRUG00000003405tarsl29965.760Takifugu_rubripes
ENSXETG00000018640-9963.798ENSTNIG00000015959tars9463.798Tetraodon_nigroviridis
ENSXETG00000018640-9962.500ENSTNIG00000011928tarsl28462.500Tetraodon_nigroviridis
ENSXETG00000018640-7964.846ENSTBEG00000002740TARS7464.846Tupaia_belangeri
ENSXETG00000018640-9962.186ENSTTRG00000005996TARS9562.186Tursiops_truncatus
ENSXETG00000018640-9962.925ENSUAMG00000027966TARS9362.925Ursus_americanus
ENSXETG00000018640-9962.925ENSUMAG00000013743TARS9362.925Ursus_maritimus
ENSXETG00000018640-8561.458ENSVPAG00000010118TARS8661.458Vicugna_pacos
ENSXETG00000018640-9963.072ENSVVUG00000022139TARS8463.072Vulpes_vulpes
ENSXETG00000018640-9864.114ENSXCOG00000009480tars10064.114Xiphophorus_couchianus
ENSXETG00000018640-9958.728ENSXCOG00000012648tarsl29858.728Xiphophorus_couchianus
ENSXETG00000018640-9961.652ENSXMAG00000016645tarsl210058.894Xiphophorus_maculatus
ENSXETG00000018640-9963.864ENSXMAG00000002878tars9363.864Xiphophorus_maculatus

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