EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000018961 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 14162 bases
Position: chrGL173513.1:313249-327410
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000041129	ResIII	PF04851.15	9.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000041129	-	3310	-	ENSXETP00000041129	1049 (aa)	-	F7AE12

Gene Model

Click here to download ENSXETG00000018961's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000018961's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000018961	-	94	67.606	ENSXETG00000002904	chd5	53	67.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000018961	-	99	82.029	ENSG00000111642	CHD4	87	82.888	Homo_sapiens
ENSXETG00000018961	-	89	67.793	ENSAPOG00000020502	-	50	65.934	Acanthochromis_polyacanthus
ENSXETG00000018961	-	89	75.920	ENSAPOG00000008935	chd4a	53	76.085	Acanthochromis_polyacanthus
ENSXETG00000018961	-	99	80.306	ENSAMEG00000014179	-	52	81.507	Ailuropoda_melanoleuca
ENSXETG00000018961	-	94	73.913	ENSACIG00000019310	chd4a	51	76.251	Amphilophus_citrinellus
ENSXETG00000018961	-	89	72.641	ENSACIG00000012387	-	51	72.698	Amphilophus_citrinellus
ENSXETG00000018961	-	99	69.825	ENSAOCG00000000507	-	51	72.647	Amphiprion_ocellaris
ENSXETG00000018961	-	94	73.960	ENSAPEG00000001757	chd4a	60	74.349	Amphiprion_percula
ENSXETG00000018961	-	95	69.200	ENSAPEG00000005957	-	52	70.230	Amphiprion_percula
ENSXETG00000018961	-	89	67.687	ENSAPEG00000020306	-	52	66.969	Amphiprion_percula
ENSXETG00000018961	-	97	73.136	ENSATEG00000016428	chd4a	55	74.171	Anabas_testudineus
ENSXETG00000018961	-	89	68.427	ENSATEG00000000976	-	52	67.433	Anabas_testudineus
ENSXETG00000018961	-	94	70.571	ENSATEG00000021141	-	61	71.702	Anabas_testudineus
ENSXETG00000018961	-	96	79.334	ENSAPLG00000014146	-	52	79.882	Anas_platyrhynchos
ENSXETG00000018961	-	96	82.854	ENSACAG00000006231	-	52	82.970	Anolis_carolinensis
ENSXETG00000018961	-	99	81.364	ENSANAG00000035685	-	52	83.907	Aotus_nancymaae
ENSXETG00000018961	-	94	71.232	ENSACLG00000024468	-	55	72.817	Astatotilapia_calliptera
ENSXETG00000018961	-	94	74.306	ENSACLG00000015837	chd4a	55	73.909	Astatotilapia_calliptera
ENSXETG00000018961	-	94	72.537	ENSAMXG00000010614	-	55	73.227	Astyanax_mexicanus
ENSXETG00000018961	-	95	76.569	ENSAMXG00000019969	chd4a	54	77.137	Astyanax_mexicanus
ENSXETG00000018961	-	99	81.478	ENSBTAG00000014734	CHD4	53	82.417	Bos_taurus
ENSXETG00000018961	-	99	80.916	ENSCJAG00000008114	-	53	82.094	Callithrix_jacchus
ENSXETG00000018961	-	99	81.478	ENSCAFG00000014929	CHD4	53	82.417	Canis_familiaris
ENSXETG00000018961	-	99	81.256	ENSCAFG00020002892	-	52	82.097	Canis_lupus_dingo
ENSXETG00000018961	-	99	82.029	ENSCHIG00000020766	-	53	82.987	Capra_hircus
ENSXETG00000018961	-	99	81.358	ENSTSYG00000006069	-	53	82.417	Carlito_syrichta
ENSXETG00000018961	-	99	81.048	ENSCPOG00000008504	-	53	82.417	Cavia_porcellus
ENSXETG00000018961	-	99	80.916	ENSCCAG00000009686	-	52	84.008	Cebus_capucinus
ENSXETG00000018961	-	99	81.382	ENSCATG00000006345	-	52	84.248	Cercocebus_atys
ENSXETG00000018961	-	99	81.932	ENSCLAG00000012244	-	53	82.888	Chinchilla_lanigera
ENSXETG00000018961	-	99	81.382	ENSCSAG00000010429	-	53	82.318	Chlorocebus_sabaeus
ENSXETG00000018961	-	100	81.611	ENSCPBG00000027716	-	50	82.510	Chrysemys_picta_bellii
ENSXETG00000018961	-	89	50.746	ENSCSAVG00000004448	-	64	57.566	Ciona_savignyi
ENSXETG00000018961	-	98	81.364	ENSCANG00000035317	-	56	82.094	Colobus_angolensis_palliatus
ENSXETG00000018961	-	99	81.478	ENSCGRG00001020662	Chd4	53	82.417	Cricetulus_griseus_chok1gshd
ENSXETG00000018961	-	99	82.029	ENSCGRG00000015920	Chd4	53	82.987	Cricetulus_griseus_crigri
ENSXETG00000018961	-	95	72.239	ENSCSEG00000019943	-	53	73.414	Cynoglossus_semilaevis
ENSXETG00000018961	-	89	66.561	ENSCSEG00000018096	-	51	65.365	Cynoglossus_semilaevis
ENSXETG00000018961	-	91	73.354	ENSCSEG00000017173	chd4a	52	73.457	Cynoglossus_semilaevis
ENSXETG00000018961	-	89	67.471	ENSCVAG00000016412	-	52	66.667	Cyprinodon_variegatus
ENSXETG00000018961	-	98	72.753	ENSCVAG00000004940	chd4a	83	74.300	Cyprinodon_variegatus
ENSXETG00000018961	-	94	72.105	ENSCVAG00000001128	-	54	72.655	Cyprinodon_variegatus
ENSXETG00000018961	-	96	74.056	ENSDARG00000063535	chd4a	51	75.300	Danio_rerio
ENSXETG00000018961	-	100	80.584	ENSDNOG00000001134	-	53	82.417	Dasypus_novemcinctus
ENSXETG00000018961	-	100	80.773	ENSDORG00000001847	Chd4	52	82.987	Dipodomys_ordii
ENSXETG00000018961	-	94	66.269	ENSEBUG00000012670	chd4a	65	67.964	Eptatretus_burgeri
ENSXETG00000018961	-	99	81.478	ENSEASG00005016150	-	53	82.417	Equus_asinus_asinus
ENSXETG00000018961	-	99	81.382	ENSECAG00000022005	CHD4	53	82.318	Equus_caballus
ENSXETG00000018961	-	89	76.891	ENSELUG00000021276	chd4a	51	77.368	Esox_lucius
ENSXETG00000018961	-	94	74.048	ENSELUG00000018086	-	54	73.857	Esox_lucius
ENSXETG00000018961	-	99	81.478	ENSFCAG00000006877	-	53	82.417	Felis_catus
ENSXETG00000018961	-	96	83.071	ENSFALG00000004785	-	63	83.185	Ficedula_albicollis
ENSXETG00000018961	-	99	77.725	ENSFDAG00000020219	-	52	78.814	Fukomys_damarensis
ENSXETG00000018961	-	89	67.585	ENSFHEG00000003253	-	54	66.532	Fundulus_heteroclitus
ENSXETG00000018961	-	94	70.926	ENSFHEG00000012736	-	59	70.588	Fundulus_heteroclitus
ENSXETG00000018961	-	94	73.741	ENSFHEG00000002013	chd4a	56	74.725	Fundulus_heteroclitus
ENSXETG00000018961	-	78	78.261	ENSGMOG00000003394	-	65	78.261	Gadus_morhua
ENSXETG00000018961	-	94	81.029	ENSGALG00000013565	-	84	80.758	Gallus_gallus
ENSXETG00000018961	-	97	72.407	ENSGAFG00000002778	chd4a	51	74.652	Gambusia_affinis
ENSXETG00000018961	-	94	72.133	ENSGAFG00000014337	-	80	80.495	Gambusia_affinis
ENSXETG00000018961	-	94	70.374	ENSGACG00000018705	chd4a	54	68.750	Gasterosteus_aculeatus
ENSXETG00000018961	-	100	81.706	ENSGAGG00000001416	-	51	82.609	Gopherus_agassizii
ENSXETG00000018961	-	99	81.382	ENSGGOG00000001930	CHD4	52	84.248	Gorilla_gorilla
ENSXETG00000018961	-	86	92.391	ENSHBUG00000019146	chd4a	50	92.391	Haplochromis_burtoni
ENSXETG00000018961	-	94	71.232	ENSHBUG00000016000	-	55	72.817	Haplochromis_burtoni
ENSXETG00000018961	-	99	81.460	ENSHGLG00000003093	-	53	82.660	Heterocephalus_glaber_female
ENSXETG00000018961	-	99	80.916	ENSHGLG00100007450	-	53	82.094	Heterocephalus_glaber_male
ENSXETG00000018961	-	87	70.847	ENSHCOG00000017525	-	55	71.751	Hippocampus_comes
ENSXETG00000018961	-	89	66.911	ENSHCOG00000014308	-	61	65.200	Hippocampus_comes
ENSXETG00000018961	-	95	75.345	ENSIPUG00000005694	chd4	52	77.277	Ictalurus_punctatus
ENSXETG00000018961	-	98	81.460	ENSSTOG00000007601	-	53	82.417	Ictidomys_tridecemlineatus
ENSXETG00000018961	-	100	80.189	ENSJJAG00000012394	Chd4	53	82.365	Jaculus_jaculus
ENSXETG00000018961	-	89	67.442	ENSKMAG00000017827	-	53	66.400	Kryptolebias_marmoratus
ENSXETG00000018961	-	94	73.118	ENSKMAG00000019286	chd4a	56	74.257	Kryptolebias_marmoratus
ENSXETG00000018961	-	99	68.569	ENSKMAG00000007932	-	52	70.097	Kryptolebias_marmoratus
ENSXETG00000018961	-	99	74.576	ENSLOCG00000007438	chd4a	50	77.867	Lepisosteus_oculatus
ENSXETG00000018961	-	61	74.468	ENSLAFG00000022842	-	52	77.179	Loxodonta_africana
ENSXETG00000018961	-	99	81.382	ENSMFAG00000003188	-	52	84.248	Macaca_fascicularis
ENSXETG00000018961	-	99	81.382	ENSMMUG00000018685	-	54	82.318	Macaca_mulatta
ENSXETG00000018961	-	99	81.382	ENSMNEG00000044776	-	52	84.248	Macaca_nemestrina
ENSXETG00000018961	-	99	78.503	ENSMLEG00000024661	-	51	81.199	Mandrillus_leucophaeus
ENSXETG00000018961	-	99	73.734	ENSMAMG00000018954	chd4a	54	74.533	Mastacembelus_armatus
ENSXETG00000018961	-	94	69.582	ENSMAMG00000002584	-	51	70.554	Mastacembelus_armatus
ENSXETG00000018961	-	89	66.737	ENSMAMG00000002137	-	51	66.566	Mastacembelus_armatus
ENSXETG00000018961	-	99	72.549	ENSMZEG00005001706	chd4a	55	73.909	Maylandia_zebra
ENSXETG00000018961	-	94	71.232	ENSMZEG00005017761	-	54	72.817	Maylandia_zebra
ENSXETG00000018961	-	96	82.681	ENSMGAG00000014084	-	52	83.251	Meleagris_gallopavo
ENSXETG00000018961	-	99	81.478	ENSMICG00000006588	-	53	82.417	Microcebus_murinus
ENSXETG00000018961	-	99	82.029	ENSMOCG00000020624	Chd4	52	82.987	Microtus_ochrogaster
ENSXETG00000018961	-	89	67.405	ENSMMOG00000013429	-	59	66.062	Mola_mola
ENSXETG00000018961	-	94	73.360	ENSMMOG00000000073	chd4a	52	73.069	Mola_mola
ENSXETG00000018961	-	95	71.471	ENSMMOG00000015971	-	53	71.928	Mola_mola
ENSXETG00000018961	-	94	70.611	ENSMALG00000022494	-	53	69.591	Monopterus_albus
ENSXETG00000018961	-	94	73.274	ENSMALG00000005766	chd4a	54	73.960	Monopterus_albus
ENSXETG00000018961	-	100	81.025	ENSMUSG00000063870	Chd4	52	82.888	Mus_musculus
ENSXETG00000018961	-	100	81.025	MGP_SPRETEiJ_G0029911	Chd4	52	82.888	Mus_spretus
ENSXETG00000018961	-	99	81.478	ENSMPUG00000016859	-	53	82.417	Mustela_putorius_furo
ENSXETG00000018961	-	99	81.478	ENSMLUG00000014343	-	53	82.417	Myotis_lucifugus
ENSXETG00000018961	-	100	80.302	ENSNGAG00000016920	Chd4	53	81.908	Nannospalax_galili
ENSXETG00000018961	-	94	71.133	ENSNBRG00000021576	-	54	72.718	Neolamprologus_brichardi
ENSXETG00000018961	-	99	80.590	ENSNLEG00000004330	-	52	81.943	Nomascus_leucogenys
ENSXETG00000018961	-	99	81.932	ENSODEG00000003114	-	52	82.888	Octodon_degus
ENSXETG00000018961	-	97	70.600	ENSONIG00000012953	-	51	73.817	Oreochromis_niloticus
ENSXETG00000018961	-	94	74.603	ENSONIG00000006992	chd4a	52	74.034	Oreochromis_niloticus
ENSXETG00000018961	-	99	78.983	ENSOCUG00000008215	-	52	79.470	Oryctolagus_cuniculus
ENSXETG00000018961	-	89	67.970	ENSORLG00000017190	-	53	66.935	Oryzias_latipes
ENSXETG00000018961	-	94	73.653	ENSORLG00000006310	chd4a	51	74.280	Oryzias_latipes
ENSXETG00000018961	-	99	68.545	ENSORLG00000012477	-	54	70.109	Oryzias_latipes
ENSXETG00000018961	-	99	68.545	ENSORLG00020004891	-	51	71.568	Oryzias_latipes_hni
ENSXETG00000018961	-	89	67.653	ENSORLG00020011739	-	59	66.633	Oryzias_latipes_hni
ENSXETG00000018961	-	94	73.653	ENSORLG00020006529	chd4a	51	74.280	Oryzias_latipes_hni
ENSXETG00000018961	-	94	73.453	ENSORLG00015019674	chd4a	54	73.900	Oryzias_latipes_hsok
ENSXETG00000018961	-	99	68.545	ENSORLG00015010692	-	54	72.619	Oryzias_latipes_hsok
ENSXETG00000018961	-	94	74.181	ENSOMEG00000016394	chd4a	55	74.578	Oryzias_melastigma
ENSXETG00000018961	-	95	69.223	ENSOMEG00000013408	-	51	70.529	Oryzias_melastigma
ENSXETG00000018961	-	89	68.499	ENSOMEG00000014929	-	52	67.641	Oryzias_melastigma
ENSXETG00000018961	-	99	81.478	ENSOGAG00000010031	-	52	82.417	Otolemur_garnettii
ENSXETG00000018961	-	99	80.894	ENSOARG00000007398	-	54	82.255	Ovis_aries
ENSXETG00000018961	-	99	81.382	ENSPPAG00000029007	-	53	82.318	Pan_paniscus
ENSXETG00000018961	-	99	81.478	ENSPPRG00000001388	-	53	82.417	Panthera_pardus
ENSXETG00000018961	-	99	81.478	ENSPTIG00000010979	-	53	82.417	Panthera_tigris_altaica
ENSXETG00000018961	-	99	81.382	ENSPTRG00000004580	CHD4	52	84.248	Pan_troglodytes
ENSXETG00000018961	-	99	81.382	ENSPANG00000025409	-	52	84.248	Papio_anubis
ENSXETG00000018961	-	99	73.041	ENSPKIG00000008268	chd4a	53	75.386	Paramormyrops_kingsleyae
ENSXETG00000018961	-	94	69.420	ENSPKIG00000012023	-	54	69.034	Paramormyrops_kingsleyae
ENSXETG00000018961	-	96	82.237	ENSPSIG00000015546	-	52	81.961	Pelodiscus_sinensis
ENSXETG00000018961	-	86	67.588	ENSPMGG00000007681	-	55	67.920	Periophthalmus_magnuspinnatus
ENSXETG00000018961	-	90	74.217	ENSPMGG00000022981	chd4a	53	74.660	Periophthalmus_magnuspinnatus
ENSXETG00000018961	-	100	80.679	ENSPEMG00000010290	Chd4	54	82.417	Peromyscus_maniculatus_bairdii
ENSXETG00000018961	-	88	84.632	ENSPCIG00000001846	-	52	85.189	Phascolarctos_cinereus
ENSXETG00000018961	-	94	71.769	ENSPFOG00000013889	-	53	72.619	Poecilia_formosa
ENSXETG00000018961	-	89	68.081	ENSPFOG00000016981	-	53	68.150	Poecilia_formosa
ENSXETG00000018961	-	97	72.788	ENSPFOG00000009089	chd4a	51	74.950	Poecilia_formosa
ENSXETG00000018961	-	94	71.002	ENSPLAG00000004006	-	58	69.361	Poecilia_latipinna
ENSXETG00000018961	-	97	73.821	ENSPLAG00000012712	chd4a	54	75.375	Poecilia_latipinna
ENSXETG00000018961	-	94	69.486	ENSPMEG00000006064	-	53	69.261	Poecilia_mexicana
ENSXETG00000018961	-	97	72.658	ENSPMEG00000009633	chd4a	55	74.851	Poecilia_mexicana
ENSXETG00000018961	-	89	67.232	ENSPMEG00000015657	-	53	66.431	Poecilia_mexicana
ENSXETG00000018961	-	97	73.066	ENSPREG00000001202	chd4a	56	74.876	Poecilia_reticulata
ENSXETG00000018961	-	89	67.338	ENSPREG00000014285	-	53	66.532	Poecilia_reticulata
ENSXETG00000018961	-	99	80.952	ENSPPYG00000004192	-	53	82.318	Pongo_abelii
ENSXETG00000018961	-	99	80.710	ENSPCOG00000018635	-	51	84.350	Propithecus_coquereli
ENSXETG00000018961	-	99	80.934	ENSPVAG00000012574	-	53	82.220	Pteropus_vampyrus
ENSXETG00000018961	-	99	68.091	ENSPNYG00000023020	-	51	71.040	Pundamilia_nyererei
ENSXETG00000018961	-	94	74.306	ENSPNYG00000002663	chd4a	53	73.909	Pundamilia_nyererei
ENSXETG00000018961	-	98	74.672	ENSPNAG00000009629	chd4a	54	76.634	Pygocentrus_nattereri
ENSXETG00000018961	-	94	71.542	ENSPNAG00000011129	-	55	72.173	Pygocentrus_nattereri
ENSXETG00000018961	-	100	81.422	ENSRNOG00000018309	Chd4	52	82.987	Rattus_norvegicus
ENSXETG00000018961	-	99	81.382	ENSRBIG00000041491	-	54	82.318	Rhinopithecus_bieti
ENSXETG00000018961	-	99	81.382	ENSRROG00000042446	-	52	84.248	Rhinopithecus_roxellana
ENSXETG00000018961	-	99	81.460	ENSSBOG00000020782	-	52	84.008	Saimiri_boliviensis_boliviensis
ENSXETG00000018961	-	99	73.575	ENSSFOG00015002908	chd4	56	75.144	Scleropages_formosus
ENSXETG00000018961	-	99	71.974	ENSSMAG00000012594	chd4a	55	74.679	Scophthalmus_maximus
ENSXETG00000018961	-	89	64.465	ENSSMAG00000017926	-	50	63.380	Scophthalmus_maximus
ENSXETG00000018961	-	92	75.221	ENSSMAG00000010969	-	52	69.116	Scophthalmus_maximus
ENSXETG00000018961	-	89	76.261	ENSSDUG00000002891	chd4a	53	75.676	Seriola_dumerili
ENSXETG00000018961	-	89	77.370	ENSSDUG00000012051	-	52	68.948	Seriola_dumerili
ENSXETG00000018961	-	99	71.978	ENSSLDG00000018645	chd4a	52	75.053	Seriola_lalandi_dorsalis
ENSXETG00000018961	-	89	67.899	ENSSLDG00000019750	-	51	66.234	Seriola_lalandi_dorsalis
ENSXETG00000018961	-	96	82.937	ENSSPUG00000015131	-	52	82.493	Sphenodon_punctatus
ENSXETG00000018961	-	94	74.580	ENSSPAG00000013983	chd4a	55	74.724	Stegastes_partitus
ENSXETG00000018961	-	89	67.476	ENSSPAG00000018749	-	83	66.667	Stegastes_partitus
ENSXETG00000018961	-	99	82.029	ENSSSCG00000000697	-	54	82.417	Sus_scrofa
ENSXETG00000018961	-	96	82.583	ENSTGUG00000013329	-	52	83.153	Taeniopygia_guttata
ENSXETG00000018961	-	94	71.039	ENSTRUG00000007202	-	53	71.544	Takifugu_rubripes
ENSXETG00000018961	-	94	66.365	ENSTRUG00000007623	-	52	67.002	Takifugu_rubripes
ENSXETG00000018961	-	95	71.909	ENSTNIG00000008031	-	54	72.718	Tetraodon_nigroviridis
ENSXETG00000018961	-	97	69.020	ENSTNIG00000004095	-	50	76.774	Tetraodon_nigroviridis
ENSXETG00000018961	-	99	80.744	ENSTTRG00000016102	-	53	81.631	Tursiops_truncatus
ENSXETG00000018961	-	99	81.011	ENSUAMG00000016452	-	72	84.109	Ursus_americanus
ENSXETG00000018961	-	99	79.485	ENSUMAG00000005336	-	51	84.813	Ursus_maritimus
ENSXETG00000018961	-	99	81.478	ENSVVUG00000011414	-	53	82.417	Vulpes_vulpes
ENSXETG00000018961	-	94	70.393	ENSXCOG00000019269	-	54	69.670	Xiphophorus_couchianus
ENSXETG00000018961	-	89	68.399	ENSXMAG00000014686	-	56	65.538	Xiphophorus_maculatus
ENSXETG00000018961	-	94	70.393	ENSXMAG00000011263	-	53	69.461	Xiphophorus_maculatus
ENSXETG00000018961	-	94	74.851	ENSXMAG00000001037	chd4a	62	75.502	Xiphophorus_maculatus