EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000019000 (Gene tree)
Gene ID: -
Gene Symbol: ddx56
Alias: -
Full Name: Xenopus tropicalis DEAD-box helicase 56 (ddx56)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 17255 bases
Position: chrGL172666.1:2428472-2445726
Accession: NM_001127081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000041201	ResIII	PF04851.15	1.5e-07	1	1
ENSXETP00000060937	ResIII	PF04851.15	1.5e-07	1	1
ENSXETP00000060937	DEAD	PF00270.29	2.3e-39	1	1
ENSXETP00000041201	DEAD	PF00270.29	2.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000041201	-	1773	-	ENSXETP00000041201	559 (aa)	-	F6VD80
ENSXETT00000063273	-	3066	-	ENSXETP00000060937	552 (aa)	-	F6YBN0

Gene Model

Click here to download ENSXETG00000019000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000019000's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000019000	ddx56	72	30.467	ENSXETG00000010135	ddx49	76	30.467
ENSXETG00000019000	ddx56	73	31.762	ENSXETG00000022984	ddx47	81	31.762
ENSXETG00000019000	ddx56	72	30.250	ENSXETG00000010061	ddx6	74	30.250
ENSXETG00000019000	ddx56	71	48.438	ENSXETG00000017825	ddx1	56	48.438

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000019000	ddx56	99	66.849	ENSG00000136271	DDX56	99	67.380	Homo_sapiens
ENSXETG00000019000	ddx56	99	72.302	ENSAPOG00000017113	ddx56	99	72.302	Acanthochromis_polyacanthus
ENSXETG00000019000	ddx56	99	66.788	ENSAMEG00000017711	DDX56	98	66.243	Ailuropoda_melanoleuca
ENSXETG00000019000	ddx56	91	65.600	ENSACIG00000013747	ddx56	97	71.348	Amphilophus_citrinellus
ENSXETG00000019000	ddx56	96	72.201	ENSAOCG00000018059	ddx56	94	75.250	Amphiprion_ocellaris
ENSXETG00000019000	ddx56	87	75.615	ENSAOCG00000015447	-	87	75.000	Amphiprion_ocellaris
ENSXETG00000019000	ddx56	99	72.545	ENSAPEG00000007267	ddx56	98	72.182	Amphiprion_percula
ENSXETG00000019000	ddx56	99	71.325	ENSATEG00000005279	ddx56	98	71.506	Anabas_testudineus
ENSXETG00000019000	ddx56	99	70.909	ENSACLG00000020113	ddx56	98	71.014	Astatotilapia_calliptera
ENSXETG00000019000	ddx56	99	68.996	ENSAMXG00000019357	ddx56	99	68.459	Astyanax_mexicanus
ENSXETG00000019000	ddx56	99	66.788	ENSBTAG00000010602	DDX56	98	66.243	Bos_taurus
ENSXETG00000019000	ddx56	97	41.261	WBGene00016073	C24H12.4	86	40.975	Caenorhabditis_elegans
ENSXETG00000019000	ddx56	99	66.849	ENSCJAG00000012233	DDX56	98	65.756	Callithrix_jacchus
ENSXETG00000019000	ddx56	82	65.351	ENSCAFG00000029295	DDX56	99	65.351	Canis_familiaris
ENSXETG00000019000	ddx56	99	65.517	ENSCAFG00020019695	DDX56	98	65.392	Canis_lupus_dingo
ENSXETG00000019000	ddx56	99	66.606	ENSCHIG00000014261	DDX56	98	66.243	Capra_hircus
ENSXETG00000019000	ddx56	99	66.788	ENSTSYG00000008048	DDX56	98	66.302	Carlito_syrichta
ENSXETG00000019000	ddx56	86	65.474	ENSCAPG00000006286	DDX56	98	64.421	Cavia_aperea
ENSXETG00000019000	ddx56	99	66.120	ENSCPOG00000003359	DDX56	98	65.209	Cavia_porcellus
ENSXETG00000019000	ddx56	99	66.120	ENSCCAG00000025303	DDX56	98	65.756	Cebus_capucinus
ENSXETG00000019000	ddx56	99	66.667	ENSCATG00000039389	DDX56	98	65.574	Cercocebus_atys
ENSXETG00000019000	ddx56	99	65.461	ENSCLAG00000007666	DDX56	98	64.738	Chinchilla_lanigera
ENSXETG00000019000	ddx56	99	66.606	ENSCSAG00000015636	DDX56	98	65.511	Chlorocebus_sabaeus
ENSXETG00000019000	ddx56	99	72.826	ENSCPBG00000024556	DDX56	97	71.739	Chrysemys_picta_bellii
ENSXETG00000019000	ddx56	91	58.777	ENSCING00000005185	-	98	58.580	Ciona_intestinalis
ENSXETG00000019000	ddx56	89	57.200	ENSCSAVG00000011266	-	98	57.200	Ciona_savignyi
ENSXETG00000019000	ddx56	99	65.942	ENSCANG00000028187	DDX56	98	65.574	Colobus_angolensis_palliatus
ENSXETG00000019000	ddx56	98	67.033	ENSCGRG00001019019	Ddx56	99	64.273	Cricetulus_griseus_chok1gshd
ENSXETG00000019000	ddx56	98	67.033	ENSCGRG00000011870	Ddx56	99	64.273	Cricetulus_griseus_crigri
ENSXETG00000019000	ddx56	99	71.143	ENSCSEG00000008368	ddx56	98	70.962	Cynoglossus_semilaevis
ENSXETG00000019000	ddx56	99	71.171	ENSCVAG00000006499	ddx56	99	71.171	Cyprinodon_variegatus
ENSXETG00000019000	ddx56	99	72.364	ENSDARG00000020913	ddx56	99	71.993	Danio_rerio
ENSXETG00000019000	ddx56	87	65.975	ENSDNOG00000036526	DDX56	98	64.815	Dasypus_novemcinctus
ENSXETG00000019000	ddx56	91	52.183	FBgn0001565	Hlc	89	52.362	Drosophila_melanogaster
ENSXETG00000019000	ddx56	72	58.955	ENSETEG00000002969	-	74	58.025	Echinops_telfairi
ENSXETG00000019000	ddx56	86	46.234	ENSETEG00000019559	-	99	44.979	Echinops_telfairi
ENSXETG00000019000	ddx56	98	61.818	ENSEBUG00000009986	ddx56	98	61.706	Eptatretus_burgeri
ENSXETG00000019000	ddx56	99	66.667	ENSEASG00005017795	DDX56	98	66.120	Equus_asinus_asinus
ENSXETG00000019000	ddx56	99	66.485	ENSECAG00000019897	DDX56	98	65.938	Equus_caballus
ENSXETG00000019000	ddx56	86	65.409	ENSEEUG00000004849	DDX56	98	64.570	Erinaceus_europaeus
ENSXETG00000019000	ddx56	99	73.675	ENSELUG00000004150	ddx56	98	73.443	Esox_lucius
ENSXETG00000019000	ddx56	99	65.876	ENSFCAG00000010261	DDX56	98	65.328	Felis_catus
ENSXETG00000019000	ddx56	99	66.727	ENSFDAG00000007128	DDX56	98	66.004	Fukomys_damarensis
ENSXETG00000019000	ddx56	99	71.014	ENSFHEG00000018008	ddx56	96	76.305	Fundulus_heteroclitus
ENSXETG00000019000	ddx56	99	66.848	ENSGAFG00000006906	ddx56	99	66.667	Gambusia_affinis
ENSXETG00000019000	ddx56	92	75.634	ENSGAGG00000006789	DDX56	89	76.096	Gopherus_agassizii
ENSXETG00000019000	ddx56	99	66.849	ENSGGOG00000012031	DDX56	98	65.756	Gorilla_gorilla
ENSXETG00000019000	ddx56	91	69.246	ENSHBUG00000015246	ddx56	90	69.384	Haplochromis_burtoni
ENSXETG00000019000	ddx56	99	67.027	ENSHGLG00000017271	DDX56	99	65.009	Heterocephalus_glaber_female
ENSXETG00000019000	ddx56	99	67.027	ENSHGLG00100015731	DDX56	99	65.009	Heterocephalus_glaber_male
ENSXETG00000019000	ddx56	99	71.168	ENSHCOG00000001685	ddx56	98	70.932	Hippocampus_comes
ENSXETG00000019000	ddx56	99	68.288	ENSIPUG00000006602	ddx56	97	68.223	Ictalurus_punctatus
ENSXETG00000019000	ddx56	99	65.938	ENSSTOG00000000464	DDX56	98	65.209	Ictidomys_tridecemlineatus
ENSXETG00000019000	ddx56	99	65.280	ENSJJAG00000014269	Ddx56	99	65.280	Jaculus_jaculus
ENSXETG00000019000	ddx56	99	71.583	ENSKMAG00000016611	ddx56	98	71.429	Kryptolebias_marmoratus
ENSXETG00000019000	ddx56	99	70.251	ENSLBEG00000026281	ddx56	99	70.072	Labrus_bergylta
ENSXETG00000019000	ddx56	99	73.126	ENSLACG00000015551	DDX56	96	72.313	Latimeria_chalumnae
ENSXETG00000019000	ddx56	100	72.085	ENSLOCG00000015185	ddx56	99	71.958	Lepisosteus_oculatus
ENSXETG00000019000	ddx56	99	66.426	ENSLAFG00000018206	DDX56	98	65.942	Loxodonta_africana
ENSXETG00000019000	ddx56	99	66.667	ENSMFAG00000041001	DDX56	98	65.574	Macaca_fascicularis
ENSXETG00000019000	ddx56	99	66.485	ENSMMUG00000002645	DDX56	98	65.392	Macaca_mulatta
ENSXETG00000019000	ddx56	99	66.667	ENSMNEG00000028492	DDX56	98	65.574	Macaca_nemestrina
ENSXETG00000019000	ddx56	99	67.031	ENSMLEG00000043591	DDX56	98	65.938	Mandrillus_leucophaeus
ENSXETG00000019000	ddx56	99	71.558	ENSMAMG00000007776	ddx56	98	71.558	Mastacembelus_armatus
ENSXETG00000019000	ddx56	99	70.909	ENSMZEG00005009813	ddx56	98	71.014	Maylandia_zebra
ENSXETG00000019000	ddx56	98	66.606	ENSMICG00000005550	DDX56	99	64.580	Microcebus_murinus
ENSXETG00000019000	ddx56	99	65.461	ENSMOCG00000016782	Ddx56	98	64.376	Microtus_ochrogaster
ENSXETG00000019000	ddx56	93	73.946	ENSMMOG00000009654	ddx56	94	76.305	Mola_mola
ENSXETG00000019000	ddx56	99	63.091	ENSMODG00000016137	DDX56	97	62.000	Monodelphis_domestica
ENSXETG00000019000	ddx56	68	66.227	ENSMALG00000016910	ddx56	99	65.969	Monopterus_albus
ENSXETG00000019000	ddx56	99	65.343	MGP_CAROLIEiJ_G0016069	Ddx56	99	64.260	Mus_caroli
ENSXETG00000019000	ddx56	99	65.823	ENSMUSG00000004393	Ddx56	98	64.919	Mus_musculus
ENSXETG00000019000	ddx56	99	65.823	MGP_PahariEiJ_G0016822	Ddx56	98	64.919	Mus_pahari
ENSXETG00000019000	ddx56	99	65.823	MGP_SPRETEiJ_G0016911	Ddx56	98	64.919	Mus_spretus
ENSXETG00000019000	ddx56	99	66.182	ENSMPUG00000018196	DDX56	86	65.273	Mustela_putorius_furo
ENSXETG00000019000	ddx56	99	66.606	ENSMLUG00000003509	DDX56	98	66.062	Myotis_lucifugus
ENSXETG00000019000	ddx56	99	66.910	ENSNGAG00000018785	Ddx56	98	65.814	Nannospalax_galili
ENSXETG00000019000	ddx56	91	70.259	ENSNBRG00000002656	ddx56	90	70.659	Neolamprologus_brichardi
ENSXETG00000019000	ddx56	99	67.031	ENSNLEG00000003816	DDX56	98	66.120	Nomascus_leucogenys
ENSXETG00000019000	ddx56	89	63.030	ENSMEUG00000006788	DDX56	99	62.424	Notamacropus_eugenii
ENSXETG00000019000	ddx56	99	64.663	ENSOPRG00000000292	-	98	64.117	Ochotona_princeps
ENSXETG00000019000	ddx56	68	66.489	ENSODEG00000014807	DDX56	99	66.489	Octodon_degus
ENSXETG00000019000	ddx56	99	70.879	ENSONIG00000011509	ddx56	98	71.091	Oreochromis_niloticus
ENSXETG00000019000	ddx56	72	57.921	ENSOANG00000015987	-	94	57.921	Ornithorhynchus_anatinus
ENSXETG00000019000	ddx56	96	57.649	ENSOANG00000006320	-	99	57.593	Ornithorhynchus_anatinus
ENSXETG00000019000	ddx56	99	64.674	ENSOCUG00000022918	DDX56	98	63.949	Oryctolagus_cuniculus
ENSXETG00000019000	ddx56	99	70.856	ENSORLG00000001434	ddx56	98	70.856	Oryzias_latipes
ENSXETG00000019000	ddx56	99	71.043	ENSORLG00020015718	ddx56	95	71.043	Oryzias_latipes_hni
ENSXETG00000019000	ddx56	99	70.856	ENSORLG00015003004	ddx56	94	70.856	Oryzias_latipes_hsok
ENSXETG00000019000	ddx56	99	70.674	ENSOMEG00000022072	ddx56	98	70.674	Oryzias_melastigma
ENSXETG00000019000	ddx56	99	65.818	ENSOGAG00000009981	DDX56	98	65.455	Otolemur_garnettii
ENSXETG00000019000	ddx56	99	66.606	ENSOARG00000015240	DDX56	98	66.243	Ovis_aries
ENSXETG00000019000	ddx56	99	53.430	ENSPPAG00000031263	-	98	53.069	Pan_paniscus
ENSXETG00000019000	ddx56	99	63.978	ENSPPAG00000029147	DDX56	98	62.903	Pan_paniscus
ENSXETG00000019000	ddx56	99	65.876	ENSPPRG00000014594	DDX56	98	65.328	Panthera_pardus
ENSXETG00000019000	ddx56	88	63.843	ENSPTIG00000019500	DDX56	92	63.430	Panthera_tigris_altaica
ENSXETG00000019000	ddx56	99	66.849	ENSPTRG00000019147	DDX56	98	65.756	Pan_troglodytes
ENSXETG00000019000	ddx56	94	53.030	ENSPTRG00000052765	-	99	52.462	Pan_troglodytes
ENSXETG00000019000	ddx56	99	66.485	ENSPANG00000002446	DDX56	98	65.392	Papio_anubis
ENSXETG00000019000	ddx56	99	73.056	ENSPKIG00000018998	ddx56	98	72.711	Paramormyrops_kingsleyae
ENSXETG00000019000	ddx56	94	72.692	ENSPMGG00000017421	ddx56	94	73.559	Periophthalmus_magnuspinnatus
ENSXETG00000019000	ddx56	99	68.051	ENSPCIG00000009336	DDX56	98	68.288	Phascolarctos_cinereus
ENSXETG00000019000	ddx56	99	72.152	ENSPFOG00000018658	ddx56	99	72.152	Poecilia_formosa
ENSXETG00000019000	ddx56	99	72.333	ENSPLAG00000019208	ddx56	99	72.333	Poecilia_latipinna
ENSXETG00000019000	ddx56	99	72.152	ENSPMEG00000001775	ddx56	99	72.152	Poecilia_mexicana
ENSXETG00000019000	ddx56	99	71.351	ENSPREG00000015142	ddx56	99	71.351	Poecilia_reticulata
ENSXETG00000019000	ddx56	99	67.031	ENSPPYG00000017591	DDX56	98	65.938	Pongo_abelii
ENSXETG00000019000	ddx56	96	66.976	ENSPCAG00000011499	DDX56	99	66.231	Procavia_capensis
ENSXETG00000019000	ddx56	99	66.004	ENSPCOG00000024864	DDX56	98	65.461	Propithecus_coquereli
ENSXETG00000019000	ddx56	88	67.453	ENSPVAG00000000791	DDX56	88	67.453	Pteropus_vampyrus
ENSXETG00000019000	ddx56	99	71.091	ENSPNYG00000019212	ddx56	98	71.196	Pundamilia_nyererei
ENSXETG00000019000	ddx56	99	71.841	ENSPNAG00000025446	ddx56	99	71.841	Pygocentrus_nattereri
ENSXETG00000019000	ddx56	99	65.642	ENSRNOG00000004670	Ddx56	98	64.738	Rattus_norvegicus
ENSXETG00000019000	ddx56	99	66.667	ENSRBIG00000030140	DDX56	98	65.574	Rhinopithecus_bieti
ENSXETG00000019000	ddx56	99	66.485	ENSRROG00000044428	DDX56	98	65.392	Rhinopithecus_roxellana
ENSXETG00000019000	ddx56	97	43.027	YLR276C	-	97	43.101	Saccharomyces_cerevisiae
ENSXETG00000019000	ddx56	99	66.849	ENSSBOG00000034339	DDX56	98	65.756	Saimiri_boliviensis_boliviensis
ENSXETG00000019000	ddx56	86	68.211	ENSSHAG00000016615	DDX56	97	67.857	Sarcophilus_harrisii
ENSXETG00000019000	ddx56	99	71.199	ENSSFOG00015012795	ddx56	99	70.662	Scleropages_formosus
ENSXETG00000019000	ddx56	99	70.886	ENSSMAG00000011280	ddx56	98	70.811	Scophthalmus_maximus
ENSXETG00000019000	ddx56	99	71.892	ENSSDUG00000023597	ddx56	98	71.841	Seriola_dumerili
ENSXETG00000019000	ddx56	99	71.892	ENSSLDG00000018369	ddx56	98	71.841	Seriola_lalandi_dorsalis
ENSXETG00000019000	ddx56	76	75.000	ENSSARG00000014363	DDX56	78	70.149	Sorex_araneus
ENSXETG00000019000	ddx56	99	73.921	ENSSPUG00000000784	DDX56	96	73.561	Sphenodon_punctatus
ENSXETG00000019000	ddx56	91	75.686	ENSSPAG00000009392	ddx56	94	75.835	Stegastes_partitus
ENSXETG00000019000	ddx56	99	65.642	ENSSSCG00000016745	DDX56	99	65.823	Sus_scrofa
ENSXETG00000019000	ddx56	99	69.982	ENSTRUG00000018623	ddx56	98	69.982	Takifugu_rubripes
ENSXETG00000019000	ddx56	99	69.395	ENSTNIG00000013593	ddx56	98	69.479	Tetraodon_nigroviridis
ENSXETG00000019000	ddx56	99	66.120	ENSTBEG00000007119	DDX56	98	65.574	Tupaia_belangeri
ENSXETG00000019000	ddx56	86	66.034	ENSTTRG00000010552	DDX56	97	65.401	Tursiops_truncatus
ENSXETG00000019000	ddx56	99	66.606	ENSUAMG00000014194	DDX56	98	66.062	Ursus_americanus
ENSXETG00000019000	ddx56	99	66.606	ENSUMAG00000009666	DDX56	98	66.062	Ursus_maritimus
ENSXETG00000019000	ddx56	99	66.062	ENSVVUG00000011905	DDX56	98	66.062	Vulpes_vulpes
ENSXETG00000019000	ddx56	99	70.054	ENSXCOG00000017413	ddx56	99	69.873	Xiphophorus_couchianus
ENSXETG00000019000	ddx56	99	71.712	ENSXMAG00000018749	ddx56	99	71.196	Xiphophorus_maculatus