EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000019379 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 1257 bases
Position: chrGL183120.1:105-1361
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000041983	zf-CCHC	PF00098.23	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000041983	-	1215	-	ENSXETP00000041983	405 (aa)	-	F7AWF5

Gene Model

Click here to download ENSXETG00000019379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000019379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000019379	-	100	95.074	ENSXETG00000006819	-	92	95.074
ENSXETG00000019379	-	100	94.828	ENSXETG00000005082	ankrd31	100	94.828
ENSXETG00000019379	-	99	90.594	ENSXETG00000026538	-	99	90.594

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000019379	-	63	44.840	ENSCPBG00000028243	-	91	44.840	Chrysemys_picta_bellii
ENSXETG00000019379	-	81	32.075	ENSCPBG00000004672	-	58	31.267	Chrysemys_picta_bellii
ENSXETG00000019379	-	51	42.342	ENSGAGG00000002892	-	99	42.342	Gopherus_agassizii
ENSXETG00000019379	-	81	32.203	ENSLBEG00000024192	-	55	31.593	Labrus_bergylta
ENSXETG00000019379	-	72	48.464	ENSLACG00000010543	-	100	48.464	Latimeria_chalumnae
ENSXETG00000019379	-	83	48.378	ENSLACG00000000325	-	99	49.118	Latimeria_chalumnae
ENSXETG00000019379	-	81	46.567	ENSLACG00000017942	-	99	46.567	Latimeria_chalumnae
ENSXETG00000019379	-	99	44.198	ENSLACG00000002363	-	100	44.198	Latimeria_chalumnae
ENSXETG00000019379	-	72	50.000	ENSLACG00000012908	-	100	50.000	Latimeria_chalumnae
ENSXETG00000019379	-	80	46.440	ENSLACG00000004000	-	99	46.440	Latimeria_chalumnae
ENSXETG00000019379	-	82	45.619	ENSLACG00000006128	-	99	45.619	Latimeria_chalumnae
ENSXETG00000019379	-	73	50.166	ENSLACG00000012373	-	88	53.759	Latimeria_chalumnae
ENSXETG00000019379	-	75	51.140	ENSLACG00000005078	-	100	50.962	Latimeria_chalumnae
ENSXETG00000019379	-	82	45.697	ENSLACG00000002836	-	99	45.697	Latimeria_chalumnae
ENSXETG00000019379	-	83	47.977	ENSLACG00000002057	-	99	47.977	Latimeria_chalumnae
ENSXETG00000019379	-	83	45.882	ENSLACG00000008039	-	100	45.882	Latimeria_chalumnae
ENSXETG00000019379	-	89	45.380	ENSLACG00000004689	-	99	45.355	Latimeria_chalumnae
ENSXETG00000019379	-	94	46.819	ENSLACG00000002768	-	97	45.202	Latimeria_chalumnae
ENSXETG00000019379	-	81	45.858	ENSLACG00000004531	-	100	45.858	Latimeria_chalumnae
ENSXETG00000019379	-	69	30.201	ENSPKIG00000008712	-	67	30.201	Paramormyrops_kingsleyae