EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000019470 (Gene tree)
Gene ID: -
Gene Symbol: tnrc6c
Alias: -
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 12866 bases
Position: chrGL172814.1:1461401-1474266
Accession: XB-GENE-6044444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000042195	Ago_hook	PF10427.9	3.7e-14	1	1
ENSXETP00000042195	RRM_1	PF00076.22	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000042195	-	5010	-	ENSXETP00000042195	1669 (aa)	-	F6XU84

Gene Model

Click here to download ENSXETG00000019470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000019470's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000019470	tnrc6c	97	38.613	ENSXETG00000030437	TNRC6A	86	38.873

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000019470	tnrc6c	100	74.794	ENSG00000078687	TNRC6C	100	80.000	Homo_sapiens
ENSXETG00000019470	tnrc6c	89	54.122	ENSAPOG00000019749	tnrc6c1	92	49.857	Acanthochromis_polyacanthus
ENSXETG00000019470	tnrc6c	100	71.388	ENSAMEG00000013756	TNRC6C	96	71.900	Ailuropoda_melanoleuca
ENSXETG00000019470	tnrc6c	92	47.767	ENSACIG00000008075	tnrc6c1	91	48.120	Amphilophus_citrinellus
ENSXETG00000019470	tnrc6c	84	67.955	ENSAOCG00000023968	tnrc6c1	92	49.971	Amphiprion_ocellaris
ENSXETG00000019470	tnrc6c	89	53.173	ENSAPEG00000009020	tnrc6c1	92	50.257	Amphiprion_percula
ENSXETG00000019470	tnrc6c	100	73.948	ENSAPLG00000005456	TNRC6C	90	73.962	Anas_platyrhynchos
ENSXETG00000019470	tnrc6c	100	74.612	ENSACAG00000016198	TNRC6C	88	74.842	Anolis_carolinensis
ENSXETG00000019470	tnrc6c	100	74.956	ENSANAG00000021554	TNRC6C	100	75.485	Aotus_nancymaae
ENSXETG00000019470	tnrc6c	99	46.810	ENSACLG00000000424	tnrc6c1	85	48.864	Astatotilapia_calliptera
ENSXETG00000019470	tnrc6c	96	78.201	ENSBTAG00000018658	TNRC6C	100	73.400	Bos_taurus
ENSXETG00000019470	tnrc6c	100	74.677	ENSCJAG00000019431	TNRC6C	100	75.323	Callithrix_jacchus
ENSXETG00000019470	tnrc6c	100	73.406	ENSCAFG00000005224	TNRC6C	96	66.800	Canis_familiaris
ENSXETG00000019470	tnrc6c	100	73.987	ENSCAFG00020006661	TNRC6C	100	74.089	Canis_lupus_dingo
ENSXETG00000019470	tnrc6c	100	72.663	ENSCHIG00000026004	TNRC6C	100	71.654	Capra_hircus
ENSXETG00000019470	tnrc6c	100	73.506	ENSTSYG00000005403	TNRC6C	100	73.621	Carlito_syrichta
ENSXETG00000019470	tnrc6c	100	69.514	ENSCAPG00000007307	TNRC6C	89	69.487	Cavia_aperea
ENSXETG00000019470	tnrc6c	100	74.118	ENSCPOG00000000467	TNRC6C	97	74.457	Cavia_porcellus
ENSXETG00000019470	tnrc6c	100	74.971	ENSCCAG00000030524	TNRC6C	100	75.617	Cebus_capucinus
ENSXETG00000019470	tnrc6c	100	74.559	ENSCATG00000033135	TNRC6C	100	75.206	Cercocebus_atys
ENSXETG00000019470	tnrc6c	100	74.794	ENSCLAG00000011139	TNRC6C	89	75.132	Chinchilla_lanigera
ENSXETG00000019470	tnrc6c	100	73.119	ENSCSAG00000005167	TNRC6C	89	73.464	Chlorocebus_sabaeus
ENSXETG00000019470	tnrc6c	70	78.992	ENSCHOG00000000088	TNRC6C	68	78.992	Choloepus_hoffmanni
ENSXETG00000019470	tnrc6c	100	76.806	ENSCPBG00000027960	TNRC6C	100	77.041	Chrysemys_picta_bellii
ENSXETG00000019470	tnrc6c	100	74.618	ENSCANG00000041771	TNRC6C	100	75.264	Colobus_angolensis_palliatus
ENSXETG00000019470	tnrc6c	100	72.743	ENSCGRG00001022686	Tnrc6c	100	72.600	Cricetulus_griseus_chok1gshd
ENSXETG00000019470	tnrc6c	100	73.086	ENSCGRG00000018041	Tnrc6c	100	72.600	Cricetulus_griseus_crigri
ENSXETG00000019470	tnrc6c	99	47.611	ENSCSEG00000012744	tnrc6c1	90	48.691	Cynoglossus_semilaevis
ENSXETG00000019470	tnrc6c	94	53.966	ENSDARG00000076847	tnrc6c1	96	53.800	Danio_rerio
ENSXETG00000019470	tnrc6c	100	71.945	ENSDNOG00000003247	TNRC6C	91	72.117	Dasypus_novemcinctus
ENSXETG00000019470	tnrc6c	100	70.444	ENSDORG00000004558	Tnrc6c	100	70.653	Dipodomys_ordii
ENSXETG00000019470	tnrc6c	90	71.515	ENSETEG00000005527	TNRC6C	87	71.859	Echinops_telfairi
ENSXETG00000019470	tnrc6c	100	74.074	ENSEASG00005004799	TNRC6C	100	74.442	Equus_asinus_asinus
ENSXETG00000019470	tnrc6c	100	74.074	ENSECAG00000012486	TNRC6C	90	74.442	Equus_caballus
ENSXETG00000019470	tnrc6c	96	73.236	ENSEEUG00000010008	TNRC6C	93	73.419	Erinaceus_europaeus
ENSXETG00000019470	tnrc6c	100	73.314	ENSFCAG00000028358	TNRC6C	100	73.533	Felis_catus
ENSXETG00000019470	tnrc6c	100	74.070	ENSFALG00000000848	TNRC6C	100	74.479	Ficedula_albicollis
ENSXETG00000019470	tnrc6c	100	74.412	ENSFDAG00000010368	TNRC6C	97	74.824	Fukomys_damarensis
ENSXETG00000019470	tnrc6c	80	50.949	ENSFHEG00000002936	tnrc6c1	92	48.258	Fundulus_heteroclitus
ENSXETG00000019470	tnrc6c	100	77.412	ENSGALG00000001725	TNRC6C	100	77.529	Gallus_gallus
ENSXETG00000019470	tnrc6c	97	48.337	ENSGAFG00000019019	tnrc6c1	97	49.025	Gambusia_affinis
ENSXETG00000019470	tnrc6c	76	54.135	ENSGACG00000012320	tnrc6c1	86	49.417	Gasterosteus_aculeatus
ENSXETG00000019470	tnrc6c	100	76.350	ENSGAGG00000022043	TNRC6C	95	76.643	Gopherus_agassizii
ENSXETG00000019470	tnrc6c	100	74.750	ENSGGOG00000011304	TNRC6C	100	74.633	Gorilla_gorilla
ENSXETG00000019470	tnrc6c	94	47.207	ENSHBUG00000010846	tnrc6c1	90	49.080	Haplochromis_burtoni
ENSXETG00000019470	tnrc6c	100	74.544	ENSHGLG00000004809	TNRC6C	89	74.838	Heterocephalus_glaber_female
ENSXETG00000019470	tnrc6c	100	73.903	ENSHGLG00100012597	TNRC6C	89	74.254	Heterocephalus_glaber_male
ENSXETG00000019470	tnrc6c	100	52.641	ENSIPUG00000000818	tnrc6c1	89	53.024	Ictalurus_punctatus
ENSXETG00000019470	tnrc6c	100	73.005	ENSSTOG00000009101	TNRC6C	97	73.415	Ictidomys_tridecemlineatus
ENSXETG00000019470	tnrc6c	100	72.749	ENSJJAG00000017055	Tnrc6c	89	73.099	Jaculus_jaculus
ENSXETG00000019470	tnrc6c	80	52.988	ENSKMAG00000021023	tnrc6c1	97	50.209	Kryptolebias_marmoratus
ENSXETG00000019470	tnrc6c	100	68.575	ENSLACG00000015283	TNRC6C	97	68.535	Latimeria_chalumnae
ENSXETG00000019470	tnrc6c	99	55.115	ENSLOCG00000013377	tnrc6c1	87	56.898	Lepisosteus_oculatus
ENSXETG00000019470	tnrc6c	100	74.429	ENSLAFG00000011122	TNRC6C	96	69.283	Loxodonta_africana
ENSXETG00000019470	tnrc6c	100	74.618	ENSMFAG00000043943	TNRC6C	100	75.264	Macaca_fascicularis
ENSXETG00000019470	tnrc6c	100	74.618	ENSMMUG00000011924	TNRC6C	100	75.264	Macaca_mulatta
ENSXETG00000019470	tnrc6c	100	74.677	ENSMNEG00000030405	TNRC6C	100	75.323	Macaca_nemestrina
ENSXETG00000019470	tnrc6c	100	74.618	ENSMLEG00000033436	TNRC6C	100	75.264	Mandrillus_leucophaeus
ENSXETG00000019470	tnrc6c	80	52.464	ENSMAMG00000023613	tnrc6c1	97	49.827	Mastacembelus_armatus
ENSXETG00000019470	tnrc6c	99	46.810	ENSMZEG00005010920	tnrc6c1	85	48.864	Maylandia_zebra
ENSXETG00000019470	tnrc6c	100	68.800	ENSMGAG00000003906	TNRC6C	90	68.247	Meleagris_gallopavo
ENSXETG00000019470	tnrc6c	100	73.684	ENSMAUG00000021618	Tnrc6c	100	73.672	Mesocricetus_auratus
ENSXETG00000019470	tnrc6c	100	75.103	ENSMICG00000003952	TNRC6C	100	75.441	Microcebus_murinus
ENSXETG00000019470	tnrc6c	100	73.635	ENSMOCG00000015879	Tnrc6c	97	74.194	Microtus_ochrogaster
ENSXETG00000019470	tnrc6c	76	55.395	ENSMMOG00000005203	tnrc6c1	97	50.264	Mola_mola
ENSXETG00000019470	tnrc6c	100	75.439	ENSMODG00000001785	TNRC6C	89	75.395	Monodelphis_domestica
ENSXETG00000019470	tnrc6c	100	73.267	MGP_CAROLIEiJ_G0017465	Tnrc6c	97	73.783	Mus_caroli
ENSXETG00000019470	tnrc6c	100	73.208	ENSMUSG00000025571	Tnrc6c	97	73.724	Mus_musculus
ENSXETG00000019470	tnrc6c	100	73.502	MGP_PahariEiJ_G0018593	Tnrc6c	97	74.018	Mus_pahari
ENSXETG00000019470	tnrc6c	100	73.149	MGP_SPRETEiJ_G0018309	Tnrc6c	97	73.666	Mus_spretus
ENSXETG00000019470	tnrc6c	100	71.568	ENSMPUG00000013348	TNRC6C	88	71.855	Mustela_putorius_furo
ENSXETG00000019470	tnrc6c	100	67.829	ENSMLUG00000014431	TNRC6C	88	68.057	Myotis_lucifugus
ENSXETG00000019470	tnrc6c	100	74.195	ENSNGAG00000012203	Tnrc6c	89	73.949	Nannospalax_galili
ENSXETG00000019470	tnrc6c	99	47.039	ENSNBRG00000005344	tnrc6c1	91	48.585	Neolamprologus_brichardi
ENSXETG00000019470	tnrc6c	100	70.898	ENSNLEG00000000047	TNRC6C	89	71.069	Nomascus_leucogenys
ENSXETG00000019470	tnrc6c	97	69.819	ENSMEUG00000005104	TNRC6C	97	70.078	Notamacropus_eugenii
ENSXETG00000019470	tnrc6c	100	74.235	ENSODEG00000012499	TNRC6C	100	74.647	Octodon_degus
ENSXETG00000019470	tnrc6c	94	49.602	ENSONIG00000002210	tnrc6c1	97	50.855	Oreochromis_niloticus
ENSXETG00000019470	tnrc6c	99	57.775	ENSOANG00000009758	-	67	69.664	Ornithorhynchus_anatinus
ENSXETG00000019470	tnrc6c	84	69.697	ENSOCUG00000006122	TNRC6C	83	59.516	Oryctolagus_cuniculus
ENSXETG00000019470	tnrc6c	99	48.011	ENSORLG00000009837	tnrc6c1	100	67.658	Oryzias_latipes
ENSXETG00000019470	tnrc6c	99	47.587	ENSORLG00020016510	tnrc6c1	99	48.624	Oryzias_latipes_hni
ENSXETG00000019470	tnrc6c	80	42.558	ENSORLG00015000171	tnrc6c1	98	43.515	Oryzias_latipes_hsok
ENSXETG00000019470	tnrc6c	99	48.708	ENSOMEG00000000357	tnrc6c1	94	49.249	Oryzias_melastigma
ENSXETG00000019470	tnrc6c	100	71.650	ENSOGAG00000007197	TNRC6C	100	72.225	Otolemur_garnettii
ENSXETG00000019470	tnrc6c	96	68.307	ENSOARG00000006041	TNRC6C	87	68.307	Ovis_aries
ENSXETG00000019470	tnrc6c	100	74.618	ENSPPAG00000027160	TNRC6C	100	75.264	Pan_paniscus
ENSXETG00000019470	tnrc6c	100	73.063	ENSPPRG00000018881	TNRC6C	100	73.239	Panthera_pardus
ENSXETG00000019470	tnrc6c	91	77.293	ENSPTIG00000008791	TNRC6C	83	81.301	Panthera_tigris_altaica
ENSXETG00000019470	tnrc6c	100	74.618	ENSPTRG00000009699	TNRC6C	100	75.264	Pan_troglodytes
ENSXETG00000019470	tnrc6c	100	74.559	ENSPANG00000019994	TNRC6C	100	75.206	Papio_anubis
ENSXETG00000019470	tnrc6c	96	52.014	ENSPKIG00000005428	tnrc6c1	100	51.008	Paramormyrops_kingsleyae
ENSXETG00000019470	tnrc6c	100	74.897	ENSPSIG00000018069	TNRC6C	97	75.206	Pelodiscus_sinensis
ENSXETG00000019470	tnrc6c	73	55.437	ENSPMGG00000022911	tnrc6c1	97	64.490	Periophthalmus_magnuspinnatus
ENSXETG00000019470	tnrc6c	100	73.552	ENSPEMG00000009785	Tnrc6c	100	71.612	Peromyscus_maniculatus_bairdii
ENSXETG00000019470	tnrc6c	57	69.685	ENSPCIG00000017421	-	99	69.919	Phascolarctos_cinereus
ENSXETG00000019470	tnrc6c	97	48.711	ENSPFOG00000012560	tnrc6c1	96	53.243	Poecilia_formosa
ENSXETG00000019470	tnrc6c	97	48.653	ENSPLAG00000021055	tnrc6c1	97	49.398	Poecilia_latipinna
ENSXETG00000019470	tnrc6c	100	73.406	ENSPPYG00000008679	TNRC6C	88	73.751	Pongo_abelii
ENSXETG00000019470	tnrc6c	90	82.547	ENSPCAG00000012510	TNRC6C	87	82.547	Procavia_capensis
ENSXETG00000019470	tnrc6c	100	75.044	ENSPCOG00000021451	TNRC6C	100	75.382	Propithecus_coquereli
ENSXETG00000019470	tnrc6c	96	80.508	ENSPVAG00000002008	TNRC6C	92	80.508	Pteropus_vampyrus
ENSXETG00000019470	tnrc6c	99	46.292	ENSPNYG00000014477	tnrc6c1	91	48.807	Pundamilia_nyererei
ENSXETG00000019470	tnrc6c	100	72.887	ENSRNOG00000022395	Tnrc6c	100	73.505	Rattus_norvegicus
ENSXETG00000019470	tnrc6c	100	74.501	ENSRBIG00000027777	TNRC6C	100	75.206	Rhinopithecus_bieti
ENSXETG00000019470	tnrc6c	100	74.559	ENSRROG00000042912	TNRC6C	100	75.206	Rhinopithecus_roxellana
ENSXETG00000019470	tnrc6c	100	73.061	ENSSBOG00000023981	TNRC6C	100	73.406	Saimiri_boliviensis_boliviensis
ENSXETG00000019470	tnrc6c	53	79.225	ENSSHAG00000018330	-	100	79.656	Sarcophilus_harrisii
ENSXETG00000019470	tnrc6c	72	56.642	ENSSFOG00015004735	-	99	62.304	Scleropages_formosus
ENSXETG00000019470	tnrc6c	99	48.893	ENSSMAG00000012761	tnrc6c1	99	51.075	Scophthalmus_maximus
ENSXETG00000019470	tnrc6c	97	50.412	ENSSDUG00000002366	tnrc6c1	91	51.865	Seriola_dumerili
ENSXETG00000019470	tnrc6c	97	49.003	ENSSLDG00000025613	tnrc6c1	97	49.914	Seriola_lalandi_dorsalis
ENSXETG00000019470	tnrc6c	91	82.353	ENSSARG00000006816	TNRC6C	88	82.353	Sorex_araneus
ENSXETG00000019470	tnrc6c	83	73.554	ENSSPUG00000007341	TNRC6C	91	73.829	Sphenodon_punctatus
ENSXETG00000019470	tnrc6c	79	52.300	ENSSPAG00000014977	tnrc6c1	90	49.538	Stegastes_partitus
ENSXETG00000019470	tnrc6c	96	78.844	ENSSSCG00000034373	TNRC6C	100	79.126	Sus_scrofa
ENSXETG00000019470	tnrc6c	100	77.340	ENSTGUG00000007733	TNRC6C	97	77.706	Taeniopygia_guttata
ENSXETG00000019470	tnrc6c	75	53.116	ENSTRUG00000011685	tnrc6c1	100	47.683	Takifugu_rubripes
ENSXETG00000019470	tnrc6c	80	52.374	ENSTNIG00000005273	tnrc6c1	100	57.741	Tetraodon_nigroviridis
ENSXETG00000019470	tnrc6c	66	67.560	ENSTBEG00000005046	TNRC6C	100	67.160	Tupaia_belangeri
ENSXETG00000019470	tnrc6c	100	74.603	ENSTTRG00000010828	TNRC6C	97	74.662	Tursiops_truncatus
ENSXETG00000019470	tnrc6c	100	72.255	ENSUMAG00000013614	TNRC6C	90	72.956	Ursus_maritimus
ENSXETG00000019470	tnrc6c	53	67.306	ENSVPAG00000006765	-	99	67.845	Vicugna_pacos
ENSXETG00000019470	tnrc6c	100	74.324	ENSVVUG00000015268	TNRC6C	100	75.029	Vulpes_vulpes
ENSXETG00000019470	tnrc6c	97	50.059	ENSXMAG00000025971	tnrc6c1	97	49.398	Xiphophorus_maculatus