EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000019789 (Gene tree)
Gene ID: -
Gene Symbol: fam83c
Alias: -
Full Name: Xenopus tropicalis family with sequence similarity 83 member C (fam83c)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 21193 bases
Position: chrGL173423.1:179195-200387
Accession: NM_001045662
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000042826	FAM83	PF07894.12	1.5e-106	1	1
ENSXETP00000063376	FAM83	PF07894.12	5.3e-106	1	1
ENSXETP00000059907	FAM83	PF07894.12	1.2e-105	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000061400	-	1365	-	ENSXETP00000063376	388 (aa)	-	F7E037
ENSXETT00000063560	-	2300	-	ENSXETP00000059907	530 (aa)	-	F7E1H3
ENSXETT00000042826	-	2099	-	ENSXETP00000042826	530 (aa)	-	F6QNH3

Gene Model

Click here to download ENSXETG00000019789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000019789's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000019789	fam83c	80	32.188	ENSXETG00000030110	FAM83E	68	33.569
ENSXETG00000019789	fam83c	90	38.746	ENSXETG00000023191	fam83a	66	41.806

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000019789	fam83c	68	54.182	ENSAPOG00000006736	fam83c	69	54.182	Acanthochromis_polyacanthus
ENSXETG00000019789	fam83c	79	51.780	ENSAMEG00000009786	FAM83C	58	40.959	Ailuropoda_melanoleuca
ENSXETG00000019789	fam83c	78	57.237	ENSACIG00000015685	fam83c	52	56.913	Amphilophus_citrinellus
ENSXETG00000019789	fam83c	78	56.908	ENSAPEG00000023028	fam83c	57	54.938	Amphiprion_percula
ENSXETG00000019789	fam83c	98	40.748	ENSAPLG00000007684	FAM83C	98	40.748	Anas_platyrhynchos
ENSXETG00000019789	fam83c	78	51.475	ENSACAG00000005517	FAM83C	80	52.000	Anolis_carolinensis
ENSXETG00000019789	fam83c	78	57.426	ENSACLG00000013293	fam83c	64	57.097	Astatotilapia_calliptera
ENSXETG00000019789	fam83c	81	55.911	ENSAMXG00000018399	fam83c	53	55.000	Astyanax_mexicanus
ENSXETG00000019789	fam83c	79	51.456	ENSCAFG00000008011	FAM83C	58	42.048	Canis_familiaris
ENSXETG00000019789	fam83c	79	51.456	ENSCAFG00020005360	FAM83C	56	42.048	Canis_lupus_dingo
ENSXETG00000019789	fam83c	77	53.356	ENSCLAG00000016840	FAM83C	57	44.419	Chinchilla_lanigera
ENSXETG00000019789	fam83c	66	36.269	ENSCPBG00000002041	FAM83C	58	36.269	Chrysemys_picta_bellii
ENSXETG00000019789	fam83c	81	50.760	ENSCGRG00001009663	Fam83c	55	44.419	Cricetulus_griseus_chok1gshd
ENSXETG00000019789	fam83c	81	50.760	ENSCGRG00000017631	Fam83c	55	44.419	Cricetulus_griseus_crigri
ENSXETG00000019789	fam83c	81	56.467	ENSCSEG00000017826	fam83c	51	56.481	Cynoglossus_semilaevis
ENSXETG00000019789	fam83c	75	57.877	ENSCVAG00000010589	fam83c	52	56.311	Cyprinodon_variegatus
ENSXETG00000019789	fam83c	82	55.031	ENSDARG00000075296	fam83c	67	55.031	Danio_rerio
ENSXETG00000019789	fam83c	77	52.000	ENSDNOG00000034661	FAM83C	56	42.506	Dasypus_novemcinctus
ENSXETG00000019789	fam83c	77	53.020	ENSDORG00000001424	Fam83c	62	41.224	Dipodomys_ordii
ENSXETG00000019789	fam83c	81	57.325	ENSELUG00000014439	fam83c	54	57.009	Esox_lucius
ENSXETG00000019789	fam83c	78	51.803	ENSFALG00000012451	FAM83C	74	52.649	Ficedula_albicollis
ENSXETG00000019789	fam83c	77	52.000	ENSFDAG00000020451	FAM83C	56	44.395	Fukomys_damarensis
ENSXETG00000019789	fam83c	77	55.853	ENSFHEG00000017527	fam83c	65	54.984	Fundulus_heteroclitus
ENSXETG00000019789	fam83c	77	48.344	ENSGMOG00000003558	fam83c	88	47.573	Gadus_morhua
ENSXETG00000019789	fam83c	77	45.667	ENSGACG00000000006	fam83c	86	45.955	Gasterosteus_aculeatus
ENSXETG00000019789	fam83c	96	40.073	ENSGAGG00000011761	FAM83C	90	40.073	Gopherus_agassizii
ENSXETG00000019789	fam83c	78	57.426	ENSHBUG00000009655	fam83c	64	57.097	Haplochromis_burtoni
ENSXETG00000019789	fam83c	79	51.768	ENSHGLG00000006814	FAM83C	56	43.573	Heterocephalus_glaber_female
ENSXETG00000019789	fam83c	79	51.768	ENSHGLG00100018815	FAM83C	56	43.833	Heterocephalus_glaber_male
ENSXETG00000019789	fam83c	81	53.503	ENSIPUG00000002046	FAM83C	74	53.628	Ictalurus_punctatus
ENSXETG00000019789	fam83c	81	50.915	ENSJJAG00000013689	Fam83c	54	44.780	Jaculus_jaculus
ENSXETG00000019789	fam83c	78	56.623	ENSKMAG00000015504	fam83c	70	55.987	Kryptolebias_marmoratus
ENSXETG00000019789	fam83c	76	56.711	ENSLBEG00000017799	fam83c	52	56.129	Labrus_bergylta
ENSXETG00000019789	fam83c	99	44.569	ENSLACG00000005534	FAM83C	99	44.569	Latimeria_chalumnae
ENSXETG00000019789	fam83c	81	56.563	ENSLOCG00000007724	fam83c	56	55.786	Lepisosteus_oculatus
ENSXETG00000019789	fam83c	78	56.811	ENSMAMG00000010316	fam83c	51	56.329	Mastacembelus_armatus
ENSXETG00000019789	fam83c	78	57.426	ENSMZEG00005009063	fam83c	64	57.097	Maylandia_zebra
ENSXETG00000019789	fam83c	94	46.114	ENSMGAG00000001956	FAM83C	98	40.643	Meleagris_gallopavo
ENSXETG00000019789	fam83c	81	50.760	ENSMAUG00000011286	Fam83c	56	43.964	Mesocricetus_auratus
ENSXETG00000019789	fam83c	81	50.152	ENSMOCG00000016691	Fam83c	57	43.736	Microtus_ochrogaster
ENSXETG00000019789	fam83c	78	56.811	ENSMALG00000020114	fam83c	50	56.452	Monopterus_albus
ENSXETG00000019789	fam83c	81	50.456	MGP_CAROLIEiJ_G0024540	-	63	40.119	Mus_caroli
ENSXETG00000019789	fam83c	81	50.456	ENSMUSG00000074647	Fam83c	63	40.119	Mus_musculus
ENSXETG00000019789	fam83c	78	51.645	MGP_PahariEiJ_G0025985	Fam83c	54	44.344	Mus_pahari
ENSXETG00000019789	fam83c	81	50.456	MGP_SPRETEiJ_G0025462	Fam83c	54	44.292	Mus_spretus
ENSXETG00000019789	fam83c	99	42.357	ENSMLUG00000004473	FAM83C	99	41.805	Myotis_lucifugus
ENSXETG00000019789	fam83c	73	47.719	ENSMEUG00000007181	FAM83C	66	38.663	Notamacropus_eugenii
ENSXETG00000019789	fam83c	79	51.911	ENSOPRG00000005474	FAM83C	56	43.880	Ochotona_princeps
ENSXETG00000019789	fam83c	99	43.094	ENSONIG00000018564	fam83c	63	55.046	Oreochromis_niloticus
ENSXETG00000019789	fam83c	78	54.636	ENSORLG00000002950	fam83c	51	54.045	Oryzias_latipes
ENSXETG00000019789	fam83c	78	54.098	ENSORLG00020001822	fam83c	51	53.526	Oryzias_latipes_hni
ENSXETG00000019789	fam83c	78	54.636	ENSORLG00015019398	fam83c	51	54.045	Oryzias_latipes_hsok
ENSXETG00000019789	fam83c	63	78.571	ENSOMEG00000003633	fam83c	56	78.571	Oryzias_melastigma
ENSXETG00000019789	fam83c	79	45.779	ENSPTIG00000020766	FAM83C	56	38.876	Panthera_tigris_altaica
ENSXETG00000019789	fam83c	79	56.634	ENSPKIG00000023250	fam83c	55	55.763	Paramormyrops_kingsleyae
ENSXETG00000019789	fam83c	78	55.629	ENSPMGG00000003433	fam83c	54	55.663	Periophthalmus_magnuspinnatus
ENSXETG00000019789	fam83c	81	50.303	ENSPEMG00000021622	Fam83c	55	44.419	Peromyscus_maniculatus_bairdii
ENSXETG00000019789	fam83c	79	55.340	ENSPFOG00000014676	fam83c	52	55.140	Poecilia_formosa
ENSXETG00000019789	fam83c	79	55.340	ENSPLAG00000023095	fam83c	52	55.140	Poecilia_latipinna
ENSXETG00000019789	fam83c	79	55.340	ENSPMEG00000012791	fam83c	52	55.140	Poecilia_mexicana
ENSXETG00000019789	fam83c	75	57.192	ENSPREG00000021668	fam83c	54	56.908	Poecilia_reticulata
ENSXETG00000019789	fam83c	79	48.220	ENSPVAG00000010434	FAM83C	58	40.044	Pteropus_vampyrus
ENSXETG00000019789	fam83c	78	49.175	ENSPNYG00000019386	fam83c	62	49.032	Pundamilia_nyererei
ENSXETG00000019789	fam83c	83	53.846	ENSPNAG00000011432	fam83c	52	55.205	Pygocentrus_nattereri
ENSXETG00000019789	fam83c	77	52.333	ENSRNOG00000046772	Fam83c	54	43.249	Rattus_norvegicus
ENSXETG00000019789	fam83c	79	55.128	ENSSDUG00000017583	fam83c	56	55.663	Seriola_dumerili
ENSXETG00000019789	fam83c	80	50.000	ENSSPUG00000012470	FAM83C	52	50.794	Sphenodon_punctatus
ENSXETG00000019789	fam83c	79	57.778	ENSSPAG00000017752	fam83c	64	55.589	Stegastes_partitus
ENSXETG00000019789	fam83c	50	41.636	ENSTGUG00000003622	-	52	56.835	Taeniopygia_guttata
ENSXETG00000019789	fam83c	78	55.814	ENSTNIG00000002833	fam83c	84	55.519	Tetraodon_nigroviridis
ENSXETG00000019789	fam83c	79	51.133	ENSVVUG00000003966	FAM83C	56	41.830	Vulpes_vulpes
ENSXETG00000019789	fam83c	83	53.231	ENSXMAG00000023922	fam83c	52	55.452	Xiphophorus_maculatus