EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000019934 (Gene tree)
Gene ID: -
Gene Symbol: SRRM4
Alias: KIAA1853|nSR100
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 68481 bases
Position: chrGL172976.1:925783-994263
Accession: 29389
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000043135	SRRM_C	PF15230.6	1.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000043135	SRRM4-201	1857	-	ENSXETP00000043135	528 (aa)	-	F6XEJ0

Gene Model

Click here to download ENSXETG00000019934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000019934's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000019934	SRRM4	90	45.657	ENSAMEG00000016072	SRRM4	63	43.553	Ailuropoda_melanoleuca
ENSXETG00000019934	SRRM4	68	45.876	ENSAPLG00000009202	SRRM4	65	46.787	Anas_platyrhynchos
ENSXETG00000019934	SRRM4	80	47.098	ENSCAPG00000008729	SRRM4	54	47.635	Cavia_aperea
ENSXETG00000019934	SRRM4	97	48.909	ENSCPOG00000003544	SRRM4	62	48.223	Cavia_porcellus
ENSXETG00000019934	SRRM4	97	48.704	ENSCLAG00000009764	SRRM4	55	51.744	Chinchilla_lanigera
ENSXETG00000019934	SRRM4	97	54.463	ENSCPBG00000012293	SRRM4	64	50.000	Chrysemys_picta_bellii
ENSXETG00000019934	SRRM4	97	50.377	ENSCGRG00001000544	Srrm4	55	51.652	Cricetulus_griseus_chok1gshd
ENSXETG00000019934	SRRM4	97	44.925	ENSCGRG00000006973	Srrm4	59	50.751	Cricetulus_griseus_crigri
ENSXETG00000019934	SRRM4	97	48.435	ENSDNOG00000000260	SRRM4	64	49.091	Dasypus_novemcinctus
ENSXETG00000019934	SRRM4	72	51.095	ENSFALG00000007700	SRRM4	65	51.523	Ficedula_albicollis
ENSXETG00000019934	SRRM4	96	47.135	ENSFDAG00000007218	SRRM4	54	51.163	Fukomys_damarensis
ENSXETG00000019934	SRRM4	90	48.915	ENSGAGG00000017218	SRRM4	58	45.810	Gopherus_agassizii
ENSXETG00000019934	SRRM4	97	49.442	ENSHGLG00000007830	SRRM4	55	51.312	Heterocephalus_glaber_female
ENSXETG00000019934	SRRM4	97	48.684	ENSLAFG00000003731	SRRM4	55	52.802	Loxodonta_africana
ENSXETG00000019934	SRRM4	96	52.230	ENSMGAG00000009082	SRRM4	63	50.515	Meleagris_gallopavo
ENSXETG00000019934	SRRM4	97	50.187	ENSMAUG00000013203	Srrm4	63	47.668	Mesocricetus_auratus
ENSXETG00000019934	SRRM4	97	49.434	ENSMOCG00000006737	Srrm4	63	48.031	Microtus_ochrogaster
ENSXETG00000019934	SRRM4	96	44.406	ENSMODG00000015283	SRRM4	62	44.717	Monodelphis_domestica
ENSXETG00000019934	SRRM4	97	51.132	MGP_CAROLIEiJ_G0027638	Srrm4	62	47.507	Mus_caroli
ENSXETG00000019934	SRRM4	97	51.992	ENSMUSG00000063919	Srrm4	62	47.757	Mus_musculus
ENSXETG00000019934	SRRM4	53	50.865	MGP_PahariEiJ_G0024219	Srrm4	62	47.507	Mus_pahari
ENSXETG00000019934	SRRM4	97	50.943	MGP_SPRETEiJ_G0028637	Srrm4	62	47.507	Mus_spretus
ENSXETG00000019934	SRRM4	97	49.813	ENSNGAG00000020807	Srrm4	53	46.154	Nannospalax_galili
ENSXETG00000019934	SRRM4	96	44.627	ENSOPRG00000016981	SRRM4	56	41.414	Ochotona_princeps
ENSXETG00000019934	SRRM4	97	49.346	ENSODEG00000006291	SRRM4	54	51.940	Octodon_degus
ENSXETG00000019934	SRRM4	97	48.885	ENSPANG00000022544	SRRM4	65	51.488	Papio_anubis
ENSXETG00000019934	SRRM4	97	51.032	ENSPEMG00000001823	Srrm4	55	52.381	Peromyscus_maniculatus_bairdii
ENSXETG00000019934	SRRM4	97	51.321	ENSRNOG00000001141	Srrm4	55	51.051	Rattus_norvegicus
ENSXETG00000019934	SRRM4	82	48.164	ENSSHAG00000017330	SRRM4	54	48.220	Sarcophilus_harrisii
ENSXETG00000019934	SRRM4	68	48.138	ENSTGUG00000009228	SRRM4	64	50.798	Taeniopygia_guttata