EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000020030 (Gene tree)
Gene ID: -
Gene Symbol: rc3h1
Alias: -
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 32428 bases
Position: chrGL172637.1:6796620-6829047
Accession: XB-GENE-5864196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000043285	zf-CCCH	PF00642.24	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000043285	-	3384	-	ENSXETP00000043285	1127 (aa)	-	F7C1X9

Gene Model

Click here to download ENSXETG00000020030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000020030's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000020030	rc3h1	100	78.746	ENSG00000135870	RC3H1	100	79.199	Homo_sapiens
ENSXETG00000020030	rc3h1	100	78.280	ENSAMEG00000015657	RC3H1	100	78.454	Ailuropoda_melanoleuca
ENSXETG00000020030	rc3h1	100	78.095	ENSAPLG00000005341	RC3H1	100	78.182	Anas_platyrhynchos
ENSXETG00000020030	rc3h1	100	75.955	ENSACAG00000015271	RC3H1	100	76.128	Anolis_carolinensis
ENSXETG00000020030	rc3h1	100	78.223	ENSANAG00000036716	RC3H1	100	78.677	Aotus_nancymaae
ENSXETG00000020030	rc3h1	100	77.700	ENSBTAG00000052708	RC3H1	100	78.329	Bos_taurus
ENSXETG00000020030	rc3h1	100	78.223	ENSCJAG00000009106	RC3H1	100	78.677	Callithrix_jacchus
ENSXETG00000020030	rc3h1	100	77.826	ENSCAFG00000014434	RC3H1	100	78.454	Canis_familiaris
ENSXETG00000020030	rc3h1	100	77.758	ENSCAFG00020017112	RC3H1	99	95.768	Canis_lupus_dingo
ENSXETG00000020030	rc3h1	100	77.787	ENSCHIG00000002873	RC3H1	100	78.068	Capra_hircus
ENSXETG00000020030	rc3h1	99	76.568	ENSTSYG00000003913	RC3H1	99	77.111	Carlito_syrichta
ENSXETG00000020030	rc3h1	100	76.435	ENSCPOG00000004349	RC3H1	100	76.522	Cavia_porcellus
ENSXETG00000020030	rc3h1	100	77.225	ENSCCAG00000025652	RC3H1	98	80.226	Cebus_capucinus
ENSXETG00000020030	rc3h1	100	78.746	ENSCATG00000033497	RC3H1	100	79.199	Cercocebus_atys
ENSXETG00000020030	rc3h1	100	77.003	ENSCLAG00000011267	RC3H1	100	77.565	Chinchilla_lanigera
ENSXETG00000020030	rc3h1	96	79.307	ENSCSAG00000011823	RC3H1	84	79.781	Chlorocebus_sabaeus
ENSXETG00000020030	rc3h1	96	91.463	ENSCPBG00000014670	RC3H1	100	91.463	Chrysemys_picta_bellii
ENSXETG00000020030	rc3h1	100	78.833	ENSCANG00000032120	RC3H1	100	79.286	Colobus_angolensis_palliatus
ENSXETG00000020030	rc3h1	100	77.700	ENSCGRG00001020812	Rc3h1	100	77.962	Cricetulus_griseus_chok1gshd
ENSXETG00000020030	rc3h1	100	77.700	ENSCGRG00000011952	Rc3h1	100	77.962	Cricetulus_griseus_crigri
ENSXETG00000020030	rc3h1	54	69.572	ENSDNOG00000011494	RC3H1	99	70.728	Dasypus_novemcinctus
ENSXETG00000020030	rc3h1	100	78.155	ENSDORG00000004855	Rc3h1	100	78.329	Dipodomys_ordii
ENSXETG00000020030	rc3h1	82	80.992	ENSETEG00000012064	RC3H1	87	81.464	Echinops_telfairi
ENSXETG00000020030	rc3h1	100	77.681	ENSEASG00005017000	RC3H1	100	77.787	Equus_asinus_asinus
ENSXETG00000020030	rc3h1	100	77.594	ENSECAG00000021208	RC3H1	100	77.700	Equus_caballus
ENSXETG00000020030	rc3h1	89	77.532	ENSEEUG00000014861	RC3H1	93	77.532	Erinaceus_europaeus
ENSXETG00000020030	rc3h1	100	77.787	ENSFCAG00000014924	RC3H1	100	78.416	Felis_catus
ENSXETG00000020030	rc3h1	100	77.643	ENSFALG00000002947	RC3H1	100	77.730	Ficedula_albicollis
ENSXETG00000020030	rc3h1	100	77.875	ENSFDAG00000013303	RC3H1	100	78.348	Fukomys_damarensis
ENSXETG00000020030	rc3h1	100	77.807	ENSGALG00000004587	RC3H1	100	77.894	Gallus_gallus
ENSXETG00000020030	rc3h1	96	90.909	ENSGAGG00000018194	RC3H1	100	90.909	Gopherus_agassizii
ENSXETG00000020030	rc3h1	100	74.435	ENSGGOG00000005735	RC3H1	100	74.891	Gorilla_gorilla
ENSXETG00000020030	rc3h1	88	77.005	ENSHGLG00000004183	-	100	77.005	Heterocephalus_glaber_female
ENSXETG00000020030	rc3h1	100	77.439	ENSHGLG00100008577	RC3H1	100	78.000	Heterocephalus_glaber_male
ENSXETG00000020030	rc3h1	100	78.136	ENSSTOG00000016033	RC3H1	100	78.590	Ictidomys_tridecemlineatus
ENSXETG00000020030	rc3h1	100	77.633	ENSJJAG00000018915	Rc3h1	100	77.807	Jaculus_jaculus
ENSXETG00000020030	rc3h1	100	71.342	ENSLACG00000016186	RC3H1	100	75.444	Latimeria_chalumnae
ENSXETG00000020030	rc3h1	97	78.739	ENSLAFG00000004367	RC3H1	99	79.478	Loxodonta_africana
ENSXETG00000020030	rc3h1	100	78.659	ENSMFAG00000033725	RC3H1	100	79.112	Macaca_fascicularis
ENSXETG00000020030	rc3h1	100	78.659	ENSMMUG00000000630	RC3H1	100	79.112	Macaca_mulatta
ENSXETG00000020030	rc3h1	100	78.659	ENSMNEG00000035968	RC3H1	100	79.112	Macaca_nemestrina
ENSXETG00000020030	rc3h1	100	78.746	ENSMLEG00000037455	RC3H1	100	79.199	Mandrillus_leucophaeus
ENSXETG00000020030	rc3h1	88	79.980	ENSMAUG00000020864	Rc3h1	100	72.592	Mesocricetus_auratus
ENSXETG00000020030	rc3h1	100	77.700	ENSMICG00000003000	RC3H1	100	78.416	Microcebus_murinus
ENSXETG00000020030	rc3h1	93	75.093	ENSMOCG00000016587	Rc3h1	98	75.187	Microtus_ochrogaster
ENSXETG00000020030	rc3h1	100	77.981	ENSMODG00000004289	RC3H1	100	78.068	Monodelphis_domestica
ENSXETG00000020030	rc3h1	100	77.043	MGP_CAROLIEiJ_G0014756	Rc3h1	100	76.870	Mus_caroli
ENSXETG00000020030	rc3h1	100	77.217	ENSMUSG00000040423	Rc3h1	100	77.304	Mus_musculus
ENSXETG00000020030	rc3h1	100	77.391	MGP_PahariEiJ_G0027992	Rc3h1	100	77.478	Mus_pahari
ENSXETG00000020030	rc3h1	100	77.217	MGP_SPRETEiJ_G0015563	Rc3h1	100	77.304	Mus_spretus
ENSXETG00000020030	rc3h1	100	77.787	ENSMPUG00000004747	RC3H1	100	78.049	Mustela_putorius_furo
ENSXETG00000020030	rc3h1	100	77.217	ENSMLUG00000011127	RC3H1	100	77.845	Myotis_lucifugus
ENSXETG00000020030	rc3h1	100	77.981	ENSNGAG00000011135	Rc3h1	100	78.242	Nannospalax_galili
ENSXETG00000020030	rc3h1	100	78.397	ENSNLEG00000015327	RC3H1	100	78.851	Nomascus_leucogenys
ENSXETG00000020030	rc3h1	99	67.624	ENSOPRG00000013068	RC3H1	99	68.174	Ochotona_princeps
ENSXETG00000020030	rc3h1	100	77.459	ENSODEG00000014185	RC3H1	100	77.652	Octodon_degus
ENSXETG00000020030	rc3h1	100	78.547	ENSOANG00000000924	RC3H1	100	78.460	Ornithorhynchus_anatinus
ENSXETG00000020030	rc3h1	99	77.866	ENSOCUG00000004930	RC3H1	98	78.590	Oryctolagus_cuniculus
ENSXETG00000020030	rc3h1	100	71.677	ENSOGAG00000004044	RC3H1	100	72.111	Otolemur_garnettii
ENSXETG00000020030	rc3h1	100	77.903	ENSOARG00000013011	RC3H1	100	78.528	Ovis_aries
ENSXETG00000020030	rc3h1	100	78.920	ENSPPAG00000039253	RC3H1	100	79.373	Pan_paniscus
ENSXETG00000020030	rc3h1	100	77.352	ENSPPRG00000009007	RC3H1	100	77.981	Panthera_pardus
ENSXETG00000020030	rc3h1	100	77.344	ENSPTIG00000015326	RC3H1	100	77.903	Panthera_tigris_altaica
ENSXETG00000020030	rc3h1	100	78.920	ENSPTRG00000001702	RC3H1	100	79.373	Pan_troglodytes
ENSXETG00000020030	rc3h1	100	78.746	ENSPANG00000008886	RC3H1	100	79.199	Papio_anubis
ENSXETG00000020030	rc3h1	100	78.329	ENSPSIG00000016181	RC3H1	100	79.025	Pelodiscus_sinensis
ENSXETG00000020030	rc3h1	100	77.198	ENSPEMG00000011966	Rc3h1	100	77.459	Peromyscus_maniculatus_bairdii
ENSXETG00000020030	rc3h1	73	82.310	ENSPCIG00000002058	RC3H1	95	96.222	Phascolarctos_cinereus
ENSXETG00000020030	rc3h1	100	77.332	ENSPPYG00000000490	RC3H1	98	80.603	Pongo_abelii
ENSXETG00000020030	rc3h1	80	82.500	ENSPCAG00000010775	RC3H1	87	82.500	Procavia_capensis
ENSXETG00000020030	rc3h1	82	74.234	ENSPCOG00000021795	RC3H1	96	75.105	Propithecus_coquereli
ENSXETG00000020030	rc3h1	100	70.968	ENSPVAG00000007593	RC3H1	100	71.603	Pteropus_vampyrus
ENSXETG00000020030	rc3h1	97	61.518	ENSPNAG00000023439	rc3h1a	96	90.423	Pygocentrus_nattereri
ENSXETG00000020030	rc3h1	100	78.659	ENSRBIG00000037743	RC3H1	100	79.112	Rhinopithecus_bieti
ENSXETG00000020030	rc3h1	100	78.571	ENSRROG00000036546	RC3H1	100	79.025	Rhinopithecus_roxellana
ENSXETG00000020030	rc3h1	93	72.430	ENSSBOG00000010664	RC3H1	100	72.923	Saimiri_boliviensis_boliviensis
ENSXETG00000020030	rc3h1	100	78.155	ENSSHAG00000007589	RC3H1	100	78.155	Sarcophilus_harrisii
ENSXETG00000020030	rc3h1	92	85.268	ENSSARG00000004660	RC3H1	91	85.268	Sorex_araneus
ENSXETG00000020030	rc3h1	100	74.261	ENSSPUG00000018472	RC3H1	100	74.783	Sphenodon_punctatus
ENSXETG00000020030	rc3h1	100	78.484	ENSSSCG00000015498	RC3H1	100	79.112	Sus_scrofa
ENSXETG00000020030	rc3h1	100	77.826	ENSTGUG00000004090	RC3H1	100	77.913	Taeniopygia_guttata
ENSXETG00000020030	rc3h1	89	84.739	ENSTBEG00000005015	RC3H1	89	85.007	Tupaia_belangeri
ENSXETG00000020030	rc3h1	100	77.913	ENSTTRG00000008572	RC3H1	100	78.454	Tursiops_truncatus
ENSXETG00000020030	rc3h1	100	77.672	ENSUAMG00000019525	RC3H1	100	77.845	Ursus_americanus
ENSXETG00000020030	rc3h1	100	78.280	ENSUMAG00000020087	RC3H1	100	78.454	Ursus_maritimus
ENSXETG00000020030	rc3h1	92	96.429	ENSVPAG00000002591	RC3H1	92	96.429	Vicugna_pacos
ENSXETG00000020030	rc3h1	100	77.730	ENSVVUG00000014201	RC3H1	98	90.702	Vulpes_vulpes