EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000020057 (Gene tree)
Gene ID: -
Gene Symbol: utp6
Alias: -
Full Name: UTP6 small subunit processome component
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 23839 bases
Position: chrGL173971.1:6671-30509
Accession: XB-GENE-997471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000060141	U3_assoc_6	PF08640.11	9.6e-15	1	1
ENSXETP00000043334	U3_assoc_6	PF08640.11	6.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000043334	-	1791	-	ENSXETP00000043334	596 (aa)	-	F6Y721
ENSXETT00000061597	-	1776	-	ENSXETP00000060141	591 (aa)	-	F7DGE6

Gene Model

Click here to download ENSXETG00000020057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000020057's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000020057	utp6	100	49.246	ENSG00000108651	UTP6	100	49.246	Homo_sapiens
ENSXETG00000020057	utp6	100	50.500	ENSAPOG00000000435	utp6	100	50.500	Acanthochromis_polyacanthus
ENSXETG00000020057	utp6	99	49.664	ENSAMEG00000005443	UTP6	99	49.664	Ailuropoda_melanoleuca
ENSXETG00000020057	utp6	100	48.087	ENSACIG00000004124	utp6	100	48.087	Amphilophus_citrinellus
ENSXETG00000020057	utp6	100	50.500	ENSAOCG00000016812	utp6	100	50.500	Amphiprion_ocellaris
ENSXETG00000020057	utp6	100	50.333	ENSAPEG00000023565	utp6	100	50.333	Amphiprion_percula
ENSXETG00000020057	utp6	100	50.921	ENSATEG00000003401	utp6	100	50.921	Anabas_testudineus
ENSXETG00000020057	utp6	99	52.971	ENSAPLG00000005821	UTP6	99	52.971	Anas_platyrhynchos
ENSXETG00000020057	utp6	100	54.271	ENSACAG00000009472	UTP6	100	54.271	Anolis_carolinensis
ENSXETG00000020057	utp6	100	49.916	ENSANAG00000034603	UTP6	100	49.916	Aotus_nancymaae
ENSXETG00000020057	utp6	100	50.586	ENSACLG00000006728	utp6	100	50.586	Astatotilapia_calliptera
ENSXETG00000020057	utp6	100	50.586	ENSAMXG00000009478	utp6	100	50.586	Astyanax_mexicanus
ENSXETG00000020057	utp6	100	46.990	ENSBTAG00000015612	UTP6	100	46.990	Bos_taurus
ENSXETG00000020057	utp6	100	45.318	ENSBTAG00000003769	-	98	45.318	Bos_taurus
ENSXETG00000020057	utp6	100	49.916	ENSCJAG00000014115	UTP6	100	49.916	Callithrix_jacchus
ENSXETG00000020057	utp6	100	50.502	ENSCAFG00000018507	UTP6	100	50.502	Canis_familiaris
ENSXETG00000020057	utp6	100	50.502	ENSCAFG00020014678	UTP6	100	50.502	Canis_lupus_dingo
ENSXETG00000020057	utp6	100	46.823	ENSCHIG00000017954	-	100	46.823	Capra_hircus
ENSXETG00000020057	utp6	100	46.823	ENSCHIG00000009726	-	100	46.823	Capra_hircus
ENSXETG00000020057	utp6	99	45.378	ENSTSYG00000002202	UTP6	99	45.378	Carlito_syrichta
ENSXETG00000020057	utp6	90	43.068	ENSCAPG00000017595	UTP6	97	43.068	Cavia_aperea
ENSXETG00000020057	utp6	99	50.588	ENSCPOG00000014294	UTP6	99	50.588	Cavia_porcellus
ENSXETG00000020057	utp6	100	46.296	ENSCCAG00000033318	-	100	46.296	Cebus_capucinus
ENSXETG00000020057	utp6	100	49.498	ENSCATG00000034868	UTP6	100	49.498	Cercocebus_atys
ENSXETG00000020057	utp6	99	50.420	ENSCLAG00000007274	UTP6	99	50.420	Chinchilla_lanigera
ENSXETG00000020057	utp6	100	49.331	ENSCSAG00000006595	UTP6	100	49.331	Chlorocebus_sabaeus
ENSXETG00000020057	utp6	73	48.101	ENSCHOG00000010940	-	73	48.101	Choloepus_hoffmanni
ENSXETG00000020057	utp6	100	56.114	ENSCPBG00000004652	UTP6	100	56.114	Chrysemys_picta_bellii
ENSXETG00000020057	utp6	87	36.347	ENSCANG00000031141	UTP6	75	61.017	Colobus_angolensis_palliatus
ENSXETG00000020057	utp6	99	51.007	ENSCGRG00001000046	Utp6	99	51.007	Cricetulus_griseus_chok1gshd
ENSXETG00000020057	utp6	94	50.177	ENSCGRG00000011543	Utp6	99	50.177	Cricetulus_griseus_crigri
ENSXETG00000020057	utp6	100	48.403	ENSCSEG00000013422	utp6	100	69.444	Cynoglossus_semilaevis
ENSXETG00000020057	utp6	100	50.419	ENSCVAG00000020322	utp6	100	50.419	Cyprinodon_variegatus
ENSXETG00000020057	utp6	100	49.500	ENSDARG00000098433	utp6	100	49.500	Danio_rerio
ENSXETG00000020057	utp6	100	51.003	ENSDNOG00000037018	UTP6	100	51.003	Dasypus_novemcinctus
ENSXETG00000020057	utp6	91	50.184	ENSDORG00000003843	Utp6	99	50.184	Dipodomys_ordii
ENSXETG00000020057	utp6	100	50.669	ENSEASG00005010870	UTP6	100	50.669	Equus_asinus_asinus
ENSXETG00000020057	utp6	100	50.334	ENSECAG00000022217	UTP6	100	50.334	Equus_caballus
ENSXETG00000020057	utp6	100	51.256	ENSELUG00000006618	utp6	100	50.915	Esox_lucius
ENSXETG00000020057	utp6	100	48.997	ENSFCAG00000015795	UTP6	100	48.997	Felis_catus
ENSXETG00000020057	utp6	100	53.769	ENSFALG00000002282	UTP6	100	53.769	Ficedula_albicollis
ENSXETG00000020057	utp6	99	50.420	ENSFDAG00000019506	UTP6	99	50.420	Fukomys_damarensis
ENSXETG00000020057	utp6	100	51.256	ENSFHEG00000010373	utp6	100	51.256	Fundulus_heteroclitus
ENSXETG00000020057	utp6	100	49.916	ENSGMOG00000011958	utp6	100	49.916	Gadus_morhua
ENSXETG00000020057	utp6	100	53.936	ENSGALG00000003260	UTP6	100	53.936	Gallus_gallus
ENSXETG00000020057	utp6	100	51.089	ENSGAFG00000008505	utp6	100	51.089	Gambusia_affinis
ENSXETG00000020057	utp6	100	49.749	ENSGACG00000019424	utp6	100	49.749	Gasterosteus_aculeatus
ENSXETG00000020057	utp6	100	55.109	ENSGAGG00000004820	UTP6	100	55.109	Gopherus_agassizii
ENSXETG00000020057	utp6	100	49.414	ENSGGOG00000013569	UTP6	100	49.414	Gorilla_gorilla
ENSXETG00000020057	utp6	100	40.504	ENSGGOG00000026003	-	100	40.504	Gorilla_gorilla
ENSXETG00000020057	utp6	100	50.586	ENSHBUG00000018668	utp6	100	50.586	Haplochromis_burtoni
ENSXETG00000020057	utp6	99	50.420	ENSHGLG00000010332	UTP6	99	50.420	Heterocephalus_glaber_female
ENSXETG00000020057	utp6	99	47.029	ENSHGLG00000008642	-	99	47.029	Heterocephalus_glaber_female
ENSXETG00000020057	utp6	99	48.235	ENSHGLG00100014271	-	99	48.235	Heterocephalus_glaber_male
ENSXETG00000020057	utp6	95	47.788	ENSHGLG00100006047	-	99	47.788	Heterocephalus_glaber_male
ENSXETG00000020057	utp6	100	48.911	ENSHCOG00000017277	utp6	100	48.911	Hippocampus_comes
ENSXETG00000020057	utp6	100	49.749	ENSIPUG00000022587	Utp6	100	49.749	Ictalurus_punctatus
ENSXETG00000020057	utp6	99	49.329	ENSSTOG00000015875	UTP6	99	49.329	Ictidomys_tridecemlineatus
ENSXETG00000020057	utp6	100	51.424	ENSKMAG00000021631	utp6	100	51.424	Kryptolebias_marmoratus
ENSXETG00000020057	utp6	100	51.089	ENSLBEG00000002115	utp6	100	51.089	Labrus_bergylta
ENSXETG00000020057	utp6	100	56.281	ENSLACG00000017158	UTP6	100	56.281	Latimeria_chalumnae
ENSXETG00000020057	utp6	91	50.554	ENSLOCG00000013797	utp6	90	50.554	Lepisosteus_oculatus
ENSXETG00000020057	utp6	100	50.000	ENSLAFG00000013008	UTP6	100	50.000	Loxodonta_africana
ENSXETG00000020057	utp6	100	49.498	ENSMFAG00000038842	UTP6	100	49.498	Macaca_fascicularis
ENSXETG00000020057	utp6	87	40.343	ENSMFAG00000041904	-	96	40.343	Macaca_fascicularis
ENSXETG00000020057	utp6	100	49.498	ENSMMUG00000020403	UTP6	100	49.498	Macaca_mulatta
ENSXETG00000020057	utp6	100	49.498	ENSMNEG00000039480	UTP6	100	49.498	Macaca_nemestrina
ENSXETG00000020057	utp6	100	43.980	ENSMLEG00000032174	UTP6	100	43.980	Mandrillus_leucophaeus
ENSXETG00000020057	utp6	100	39.101	ENSMLEG00000039364	-	100	39.101	Mandrillus_leucophaeus
ENSXETG00000020057	utp6	100	51.256	ENSMAMG00000002228	utp6	99	51.256	Mastacembelus_armatus
ENSXETG00000020057	utp6	100	50.586	ENSMZEG00005023895	utp6	100	50.586	Maylandia_zebra
ENSXETG00000020057	utp6	95	52.993	ENSMGAG00000008111	UTP6	100	52.993	Meleagris_gallopavo
ENSXETG00000020057	utp6	99	51.342	ENSMAUG00000021895	Utp6	99	51.342	Mesocricetus_auratus
ENSXETG00000020057	utp6	100	49.331	ENSMICG00000002632	UTP6	100	49.331	Microcebus_murinus
ENSXETG00000020057	utp6	99	50.839	ENSMOCG00000014163	Utp6	99	50.839	Microtus_ochrogaster
ENSXETG00000020057	utp6	100	50.251	ENSMMOG00000008653	utp6	100	72.222	Mola_mola
ENSXETG00000020057	utp6	100	54.013	ENSMODG00000019206	UTP6	100	54.013	Monodelphis_domestica
ENSXETG00000020057	utp6	100	50.754	ENSMALG00000021112	utp6	100	50.754	Monopterus_albus
ENSXETG00000020057	utp6	99	51.174	MGP_CAROLIEiJ_G0016828	Utp6	99	51.174	Mus_caroli
ENSXETG00000020057	utp6	99	51.174	ENSMUSG00000035575	Utp6	99	51.174	Mus_musculus
ENSXETG00000020057	utp6	99	44.966	MGP_PahariEiJ_G0017965	Utp6	99	44.966	Mus_pahari
ENSXETG00000020057	utp6	99	50.839	MGP_SPRETEiJ_G0017672	Utp6	99	50.839	Mus_spretus
ENSXETG00000020057	utp6	100	48.997	ENSMPUG00000014581	UTP6	100	48.997	Mustela_putorius_furo
ENSXETG00000020057	utp6	100	49.666	ENSMLUG00000016422	UTP6	100	49.666	Myotis_lucifugus
ENSXETG00000020057	utp6	99	51.007	ENSNGAG00000015482	Utp6	99	51.007	Nannospalax_galili
ENSXETG00000020057	utp6	100	50.921	ENSNBRG00000019714	utp6	100	50.921	Neolamprologus_brichardi
ENSXETG00000020057	utp6	100	49.079	ENSNLEG00000011009	UTP6	100	49.079	Nomascus_leucogenys
ENSXETG00000020057	utp6	76	70.000	ENSOPRG00000008446	-	76	70.000	Ochotona_princeps
ENSXETG00000020057	utp6	65	49.359	ENSODEG00000011971	UTP6	99	49.359	Octodon_degus
ENSXETG00000020057	utp6	100	50.754	ENSONIG00000018090	utp6	100	50.754	Oreochromis_niloticus
ENSXETG00000020057	utp6	98	51.701	ENSOANG00000004279	UTP6	99	51.701	Ornithorhynchus_anatinus
ENSXETG00000020057	utp6	99	49.161	ENSOCUG00000016980	UTP6	99	49.161	Oryctolagus_cuniculus
ENSXETG00000020057	utp6	99	50.083	ENSORLG00000003546	utp6	64	50.083	Oryzias_latipes
ENSXETG00000020057	utp6	99	50.252	ENSORLG00020010377	utp6	99	50.252	Oryzias_latipes_hni
ENSXETG00000020057	utp6	99	49.750	ENSORLG00015008893	utp6	99	49.750	Oryzias_latipes_hsok
ENSXETG00000020057	utp6	100	50.084	ENSOMEG00000017487	utp6	100	50.084	Oryzias_melastigma
ENSXETG00000020057	utp6	87	43.238	ENSOGAG00000004511	UTP6	100	43.238	Otolemur_garnettii
ENSXETG00000020057	utp6	100	46.656	ENSOARG00000013474	UTP6	100	46.656	Ovis_aries
ENSXETG00000020057	utp6	100	49.414	ENSPPAG00000038089	UTP6	100	49.414	Pan_paniscus
ENSXETG00000020057	utp6	100	40.234	ENSPPAG00000016895	-	100	40.234	Pan_paniscus
ENSXETG00000020057	utp6	100	50.167	ENSPPRG00000001010	UTP6	100	50.167	Panthera_pardus
ENSXETG00000020057	utp6	100	50.334	ENSPTIG00000013913	UTP6	100	50.334	Panthera_tigris_altaica
ENSXETG00000020057	utp6	100	49.414	ENSPTRG00000008977	UTP6	100	49.414	Pan_troglodytes
ENSXETG00000020057	utp6	100	40.234	ENSPTRG00000044798	-	100	40.234	Pan_troglodytes
ENSXETG00000020057	utp6	98	38.540	ENSPANG00000034274	-	99	38.540	Papio_anubis
ENSXETG00000020057	utp6	100	47.579	ENSPANG00000023113	UTP6	100	47.579	Papio_anubis
ENSXETG00000020057	utp6	100	50.083	ENSPKIG00000004653	utp6	100	50.083	Paramormyrops_kingsleyae
ENSXETG00000020057	utp6	100	54.941	ENSPSIG00000012435	UTP6	100	54.941	Pelodiscus_sinensis
ENSXETG00000020057	utp6	100	50.754	ENSPMGG00000009548	utp6	100	50.754	Periophthalmus_magnuspinnatus
ENSXETG00000020057	utp6	99	50.839	ENSPEMG00000014081	Utp6	99	50.839	Peromyscus_maniculatus_bairdii
ENSXETG00000020057	utp6	93	37.653	ENSPMAG00000009561	utp6	100	37.653	Petromyzon_marinus
ENSXETG00000020057	utp6	100	53.311	ENSPCIG00000029968	UTP6	86	53.936	Phascolarctos_cinereus
ENSXETG00000020057	utp6	100	51.256	ENSPFOG00000013918	utp6	100	51.256	Poecilia_formosa
ENSXETG00000020057	utp6	100	51.424	ENSPLAG00000017825	utp6	100	51.424	Poecilia_latipinna
ENSXETG00000020057	utp6	100	51.256	ENSPMEG00000008133	utp6	100	51.256	Poecilia_mexicana
ENSXETG00000020057	utp6	100	50.084	ENSPREG00000013108	utp6	99	50.084	Poecilia_reticulata
ENSXETG00000020057	utp6	100	47.739	ENSPPYG00000008154	UTP6	100	47.739	Pongo_abelii
ENSXETG00000020057	utp6	100	48.495	ENSPCOG00000010224	UTP6	100	48.495	Propithecus_coquereli
ENSXETG00000020057	utp6	100	46.321	ENSPVAG00000015759	UTP6	100	46.321	Pteropus_vampyrus
ENSXETG00000020057	utp6	100	50.586	ENSPNYG00000002290	utp6	100	50.586	Pundamilia_nyererei
ENSXETG00000020057	utp6	100	49.079	ENSPNAG00000027370	utp6	100	49.079	Pygocentrus_nattereri
ENSXETG00000020057	utp6	99	50.420	ENSRNOG00000014209	Utp6	99	50.420	Rattus_norvegicus
ENSXETG00000020057	utp6	100	49.331	ENSRBIG00000020822	UTP6	100	49.331	Rhinopithecus_bieti
ENSXETG00000020057	utp6	100	49.331	ENSRROG00000036838	UTP6	100	49.331	Rhinopithecus_roxellana
ENSXETG00000020057	utp6	51	53.135	ENSSHAG00000018792	-	99	54.125	Sarcophilus_harrisii
ENSXETG00000020057	utp6	100	50.918	ENSSFOG00015005978	utp6	100	50.918	Scleropages_formosus
ENSXETG00000020057	utp6	100	50.754	ENSSMAG00000014772	utp6	100	50.754	Scophthalmus_maximus
ENSXETG00000020057	utp6	100	51.082	ENSSDUG00000000329	utp6	100	51.082	Seriola_dumerili
ENSXETG00000020057	utp6	100	50.754	ENSSLDG00000016724	utp6	100	50.754	Seriola_lalandi_dorsalis
ENSXETG00000020057	utp6	99	43.121	ENSSARG00000010778	UTP6	99	43.121	Sorex_araneus
ENSXETG00000020057	utp6	100	54.439	ENSSPUG00000005273	UTP6	100	54.439	Sphenodon_punctatus
ENSXETG00000020057	utp6	100	49.916	ENSSPAG00000011871	utp6	99	49.916	Stegastes_partitus
ENSXETG00000020057	utp6	100	50.167	ENSSSCG00000017745	UTP6	100	50.167	Sus_scrofa
ENSXETG00000020057	utp6	100	53.601	ENSTGUG00000004999	UTP6	100	53.601	Taeniopygia_guttata
ENSXETG00000020057	utp6	99	50.084	ENSTRUG00000012005	utp6	99	50.084	Takifugu_rubripes
ENSXETG00000020057	utp6	99	50.252	ENSTNIG00000003235	utp6	99	50.252	Tetraodon_nigroviridis
ENSXETG00000020057	utp6	64	42.541	ENSTBEG00000005388	-	64	42.541	Tupaia_belangeri
ENSXETG00000020057	utp6	100	50.083	ENSTTRG00000009911	UTP6	100	50.083	Tursiops_truncatus
ENSXETG00000020057	utp6	99	49.832	ENSUMAG00000015139	UTP6	99	49.832	Ursus_maritimus
ENSXETG00000020057	utp6	100	50.502	ENSVPAG00000005782	UTP6	100	50.502	Vicugna_pacos
ENSXETG00000020057	utp6	100	50.671	ENSVVUG00000012238	UTP6	100	50.671	Vulpes_vulpes
ENSXETG00000020057	utp6	100	50.584	ENSXCOG00000013626	utp6	100	75.862	Xiphophorus_couchianus
ENSXETG00000020057	utp6	100	50.586	ENSXMAG00000017414	utp6	100	50.586	Xiphophorus_maculatus