EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000020236 (Gene tree)
Gene ID: -
Gene Symbol: rbfox3
Alias: -
Full Name: RNA binding fox-1 homolog 3
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 24309 bases
Position: chrGL172665.1:1268169-1292477
Accession: XB-GENE-976381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000043661	Fox-1_C	PF12414.8	4.1e-21	1	1
ENSXETP00000043661	RRM_1	PF00076.22	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000043661	-	1185	-	ENSXETP00000043661	394 (aa)	-	F6U870

Gene Model

Click here to download ENSXETG00000020236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000020236's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000020236	rbfox3	99	51.208	ENSXETG00000000231	rbfox2	100	49.639

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000020236	rbfox3	84	65.075	ENSG00000167281	RBFOX3	99	70.000	Homo_sapiens
ENSXETG00000020236	rbfox3	97	49.870	ENSAPOG00000015658	-	91	49.086	Acanthochromis_polyacanthus
ENSXETG00000020236	rbfox3	98	63.566	ENSAPOG00000021630	rbfox3b	89	66.954	Acanthochromis_polyacanthus
ENSXETG00000020236	rbfox3	98	65.903	ENSAMEG00000014170	RBFOX3	98	65.473	Ailuropoda_melanoleuca
ENSXETG00000020236	rbfox3	85	58.824	ENSACIG00000003768	-	85	60.577	Amphilophus_citrinellus
ENSXETG00000020236	rbfox3	85	63.095	ENSACIG00000010817	rbfox3b	99	63.095	Amphilophus_citrinellus
ENSXETG00000020236	rbfox3	96	58.639	ENSAOCG00000010786	-	92	57.653	Amphiprion_ocellaris
ENSXETG00000020236	rbfox3	88	67.147	ENSAOCG00000012358	rbfox3b	89	66.954	Amphiprion_ocellaris
ENSXETG00000020236	rbfox3	65	82.500	ENSAPEG00000019081	rbfox3b	72	93.103	Amphiprion_percula
ENSXETG00000020236	rbfox3	97	58.929	ENSAPEG00000015891	-	93	58.205	Amphiprion_percula
ENSXETG00000020236	rbfox3	85	59.838	ENSATEG00000019945	rbfox3b	99	61.433	Anabas_testudineus
ENSXETG00000020236	rbfox3	81	62.963	ENSATEG00000023101	-	96	61.947	Anabas_testudineus
ENSXETG00000020236	rbfox3	88	68.286	ENSACAG00000016093	RBFOX3	91	68.571	Anolis_carolinensis
ENSXETG00000020236	rbfox3	81	65.839	ENSANAG00000023457	RBFOX3	100	66.172	Aotus_nancymaae
ENSXETG00000020236	rbfox3	98	62.887	ENSACLG00000020011	rbfox3b	100	65.875	Astatotilapia_calliptera
ENSXETG00000020236	rbfox3	88	64.857	ENSACLG00000025552	-	89	64.286	Astatotilapia_calliptera
ENSXETG00000020236	rbfox3	88	64.873	ENSAMXG00000037246	rbfox3a	98	64.873	Astyanax_mexicanus
ENSXETG00000020236	rbfox3	89	63.099	ENSAMXG00000042841	rbfox3b	93	63.610	Astyanax_mexicanus
ENSXETG00000020236	rbfox3	81	53.161	ENSBTAG00000006280	RBFOX3	100	54.167	Bos_taurus
ENSXETG00000020236	rbfox3	81	61.671	ENSCJAG00000009563	RBFOX3	100	62.674	Callithrix_jacchus
ENSXETG00000020236	rbfox3	76	64.590	ENSCAFG00000005547	RBFOX3	99	66.667	Canis_familiaris
ENSXETG00000020236	rbfox3	91	58.247	ENSCAFG00020008126	RBFOX3	100	59.250	Canis_lupus_dingo
ENSXETG00000020236	rbfox3	91	58.247	ENSCHIG00000009124	RBFOX3	100	59.000	Capra_hircus
ENSXETG00000020236	rbfox3	81	62.069	ENSTSYG00000029617	RBFOX3	100	63.889	Carlito_syrichta
ENSXETG00000020236	rbfox3	91	59.335	ENSCPOG00000021703	RBFOX3	100	62.534	Cavia_porcellus
ENSXETG00000020236	rbfox3	81	65.839	ENSCCAG00000028450	RBFOX3	100	66.172	Cebus_capucinus
ENSXETG00000020236	rbfox3	81	66.770	ENSCATG00000018349	RBFOX3	100	67.062	Cercocebus_atys
ENSXETG00000020236	rbfox3	91	59.897	ENSCLAG00000006449	RBFOX3	100	62.881	Chinchilla_lanigera
ENSXETG00000020236	rbfox3	81	66.460	ENSCSAG00000002355	RBFOX3	100	66.766	Chlorocebus_sabaeus
ENSXETG00000020236	rbfox3	98	66.321	ENSCPBG00000010904	RBFOX3	100	69.552	Chrysemys_picta_bellii
ENSXETG00000020236	rbfox3	91	58.763	ENSCANG00000043120	RBFOX3	100	66.766	Colobus_angolensis_palliatus
ENSXETG00000020236	rbfox3	91	58.462	ENSCGRG00001019476	Rbfox3	100	62.983	Cricetulus_griseus_chok1gshd
ENSXETG00000020236	rbfox3	91	58.462	ENSCGRG00000003268	Rbfox3	100	62.983	Cricetulus_griseus_crigri
ENSXETG00000020236	rbfox3	91	54.121	ENSCSEG00000020606	RBFOX3	87	54.969	Cynoglossus_semilaevis
ENSXETG00000020236	rbfox3	98	60.154	ENSCSEG00000015567	RBFOX3	98	57.143	Cynoglossus_semilaevis
ENSXETG00000020236	rbfox3	88	67.147	ENSCVAG00000006882	rbfox3b	88	67.147	Cyprinodon_variegatus
ENSXETG00000020236	rbfox3	88	65.156	ENSDARG00000010083	rbfox3a	99	66.289	Danio_rerio
ENSXETG00000020236	rbfox3	99	51.282	ENSDARG00000074310	rbfox3b	97	69.608	Danio_rerio
ENSXETG00000020236	rbfox3	67	62.284	ENSDNOG00000039391	RBFOX3	97	53.908	Dasypus_novemcinctus
ENSXETG00000020236	rbfox3	91	51.309	ENSDORG00000005352	Rbfox3	100	54.062	Dipodomys_ordii
ENSXETG00000020236	rbfox3	98	52.736	ENSEBUG00000002129	RBFOX3	99	52.736	Eptatretus_burgeri
ENSXETG00000020236	rbfox3	76	45.659	ENSEBUG00000013559	RBFOX3	81	45.659	Eptatretus_burgeri
ENSXETG00000020236	rbfox3	81	66.049	ENSEASG00005005059	RBFOX3	100	66.962	Equus_asinus_asinus
ENSXETG00000020236	rbfox3	81	65.741	ENSECAG00000023811	RBFOX3	100	66.962	Equus_caballus
ENSXETG00000020236	rbfox3	91	52.970	ENSEEUG00000013974	RBFOX3	100	54.654	Erinaceus_europaeus
ENSXETG00000020236	rbfox3	98	63.144	ENSELUG00000017963	rbfox3b	100	58.160	Esox_lucius
ENSXETG00000020236	rbfox3	88	66.189	ENSFCAG00000002555	RBFOX3	100	65.579	Felis_catus
ENSXETG00000020236	rbfox3	99	61.765	ENSFALG00000012288	RBFOX3	99	62.069	Ficedula_albicollis
ENSXETG00000020236	rbfox3	91	56.041	ENSFDAG00000007489	RBFOX3	100	60.169	Fukomys_damarensis
ENSXETG00000020236	rbfox3	85	58.333	ENSFHEG00000008550	rbfox3b	100	58.333	Fundulus_heteroclitus
ENSXETG00000020236	rbfox3	77	66.667	ENSGMOG00000019304	-	72	66.667	Gadus_morhua
ENSXETG00000020236	rbfox3	89	69.405	ENSGALG00000032889	RBFOX3	91	70.115	Gallus_gallus
ENSXETG00000020236	rbfox3	83	66.565	ENSGAFG00000005025	rbfox3b	88	66.261	Gambusia_affinis
ENSXETG00000020236	rbfox3	74	76.410	ENSGACG00000002138	-	100	55.288	Gasterosteus_aculeatus
ENSXETG00000020236	rbfox3	98	66.408	ENSGAGG00000020025	RBFOX3	100	69.552	Gopherus_agassizii
ENSXETG00000020236	rbfox3	91	58.763	ENSGGOG00000012546	RBFOX3	100	66.766	Gorilla_gorilla
ENSXETG00000020236	rbfox3	99	61.069	ENSHBUG00000023098	-	99	60.560	Haplochromis_burtoni
ENSXETG00000020236	rbfox3	98	63.049	ENSHBUG00000018099	rbfox3b	88	66.859	Haplochromis_burtoni
ENSXETG00000020236	rbfox3	91	59.288	ENSHGLG00000008679	RBFOX3	100	62.466	Heterocephalus_glaber_female
ENSXETG00000020236	rbfox3	91	52.683	ENSHGLG00100014739	RBFOX3	100	57.037	Heterocephalus_glaber_male
ENSXETG00000020236	rbfox3	85	57.988	ENSHCOG00000001863	RBFOX3	75	89.655	Hippocampus_comes
ENSXETG00000020236	rbfox3	81	60.870	ENSHCOG00000007444	RBFOX3	82	59.942	Hippocampus_comes
ENSXETG00000020236	rbfox3	85	53.005	ENSIPUG00000021966	rbfox3b	81	72.811	Ictalurus_punctatus
ENSXETG00000020236	rbfox3	98	60.560	ENSIPUG00000012010	rbfox3a	98	63.739	Ictalurus_punctatus
ENSXETG00000020236	rbfox3	91	56.474	ENSSTOG00000026817	RBFOX3	100	61.243	Ictidomys_tridecemlineatus
ENSXETG00000020236	rbfox3	91	59.278	ENSJJAG00000014167	Rbfox3	100	63.611	Jaculus_jaculus
ENSXETG00000020236	rbfox3	98	59.173	ENSKMAG00000006726	rbfox3b	89	66.954	Kryptolebias_marmoratus
ENSXETG00000020236	rbfox3	88	67.143	ENSLBEG00000022508	-	89	64.571	Labrus_bergylta
ENSXETG00000020236	rbfox3	98	63.144	ENSLBEG00000004030	rbfox3b	99	62.798	Labrus_bergylta
ENSXETG00000020236	rbfox3	98	62.341	ENSLACG00000018409	-	100	63.104	Latimeria_chalumnae
ENSXETG00000020236	rbfox3	99	61.671	ENSLOCG00000012267	rbfox3a	98	66.571	Lepisosteus_oculatus
ENSXETG00000020236	rbfox3	98	65.228	ENSLAFG00000016623	RBFOX3	98	64.721	Loxodonta_africana
ENSXETG00000020236	rbfox3	91	56.331	ENSMFAG00000002247	RBFOX3	100	63.510	Macaca_fascicularis
ENSXETG00000020236	rbfox3	58	100.000	ENSMMUG00000023028	RBFOX3	92	100.000	Macaca_mulatta
ENSXETG00000020236	rbfox3	81	66.460	ENSMNEG00000041147	RBFOX3	100	66.766	Macaca_nemestrina
ENSXETG00000020236	rbfox3	81	66.770	ENSMLEG00000025686	RBFOX3	100	67.062	Mandrillus_leucophaeus
ENSXETG00000020236	rbfox3	85	61.078	ENSMAMG00000019810	rbfox3b	99	61.078	Mastacembelus_armatus
ENSXETG00000020236	rbfox3	98	60.256	ENSMAMG00000020600	-	99	57.143	Mastacembelus_armatus
ENSXETG00000020236	rbfox3	82	55.325	ENSMZEG00005003055	-	53	75.243	Maylandia_zebra
ENSXETG00000020236	rbfox3	98	63.049	ENSMZEG00005000781	rbfox3b	89	66.667	Maylandia_zebra
ENSXETG00000020236	rbfox3	57	77.533	ENSMGAG00000005600	RBFOX3	86	77.974	Meleagris_gallopavo
ENSXETG00000020236	rbfox3	91	59.383	ENSMAUG00000013543	Rbfox3	100	62.050	Mesocricetus_auratus
ENSXETG00000020236	rbfox3	88	67.429	ENSMICG00000014898	RBFOX3	100	67.857	Microcebus_murinus
ENSXETG00000020236	rbfox3	91	58.355	ENSMOCG00000015373	Rbfox3	100	63.158	Microtus_ochrogaster
ENSXETG00000020236	rbfox3	99	59.194	ENSMMOG00000020193	rbfox3b	100	59.137	Mola_mola
ENSXETG00000020236	rbfox3	88	67.816	ENSMODG00000002089	RBFOX3	90	67.816	Monodelphis_domestica
ENSXETG00000020236	rbfox3	98	61.795	ENSMALG00000018270	-	98	57.267	Monopterus_albus
ENSXETG00000020236	rbfox3	88	66.282	ENSMALG00000020407	rbfox3b	89	66.092	Monopterus_albus
ENSXETG00000020236	rbfox3	91	61.433	MGP_CAROLIEiJ_G0017487	Rbfox3	100	76.471	Mus_caroli
ENSXETG00000020236	rbfox3	91	63.361	ENSMUSG00000025576	Rbfox3	100	75.882	Mus_musculus
ENSXETG00000020236	rbfox3	91	63.736	MGP_PahariEiJ_G0018614	Rbfox3	100	76.471	Mus_pahari
ENSXETG00000020236	rbfox3	91	63.636	MGP_SPRETEiJ_G0018331	Rbfox3	100	76.471	Mus_spretus
ENSXETG00000020236	rbfox3	99	64.216	ENSMPUG00000012319	RBFOX3	99	64.216	Mustela_putorius_furo
ENSXETG00000020236	rbfox3	91	57.908	ENSNGAG00000018006	Rbfox3	100	63.435	Nannospalax_galili
ENSXETG00000020236	rbfox3	62	92.593	ENSNBRG00000010102	rbfox3b	73	92.593	Neolamprologus_brichardi
ENSXETG00000020236	rbfox3	93	57.568	ENSNBRG00000022885	-	90	58.239	Neolamprologus_brichardi
ENSXETG00000020236	rbfox3	58	77.500	ENSNLEG00000000153	-	87	77.500	Nomascus_leucogenys
ENSXETG00000020236	rbfox3	60	93.617	ENSMEUG00000004218	-	66	96.552	Notamacropus_eugenii
ENSXETG00000020236	rbfox3	73	76.440	ENSOPRG00000016279	-	79	76.440	Ochotona_princeps
ENSXETG00000020236	rbfox3	91	59.897	ENSODEG00000009433	RBFOX3	100	66.864	Octodon_degus
ENSXETG00000020236	rbfox3	95	60.759	ENSONIG00000009549	rbfox3b	100	60.859	Oreochromis_niloticus
ENSXETG00000020236	rbfox3	90	65.746	ENSONIG00000007282	-	99	65.193	Oreochromis_niloticus
ENSXETG00000020236	rbfox3	71	61.589	ENSOCUG00000014217	RBFOX3	94	57.602	Oryctolagus_cuniculus
ENSXETG00000020236	rbfox3	98	63.049	ENSORLG00000000905	rbfox3b	70	66.954	Oryzias_latipes
ENSXETG00000020236	rbfox3	98	63.049	ENSORLG00020018030	rbfox3b	98	57.925	Oryzias_latipes_hni
ENSXETG00000020236	rbfox3	98	60.644	ENSORLG00015009200	rbfox3b	99	57.440	Oryzias_latipes_hsok
ENSXETG00000020236	rbfox3	55	72.034	ENSOMEG00000014677	rbfox3b	63	71.730	Oryzias_melastigma
ENSXETG00000020236	rbfox3	99	63.010	ENSOGAG00000029595	RBFOX3	98	63.010	Otolemur_garnettii
ENSXETG00000020236	rbfox3	98	53.695	ENSOARG00000002908	RBFOX3	100	54.887	Ovis_aries
ENSXETG00000020236	rbfox3	70	64.260	ENSPPAG00000025383	RBFOX3	93	64.726	Pan_paniscus
ENSXETG00000020236	rbfox3	81	61.243	ENSPPRG00000007819	RBFOX3	100	62.890	Panthera_pardus
ENSXETG00000020236	rbfox3	91	58.763	ENSPTRG00000009727	RBFOX3	100	66.766	Pan_troglodytes
ENSXETG00000020236	rbfox3	81	66.770	ENSPANG00000019837	RBFOX3	100	67.062	Papio_anubis
ENSXETG00000020236	rbfox3	98	54.005	ENSPKIG00000022633	-	92	54.005	Paramormyrops_kingsleyae
ENSXETG00000020236	rbfox3	98	64.359	ENSPKIG00000010299	rbfox3a	92	60.411	Paramormyrops_kingsleyae
ENSXETG00000020236	rbfox3	78	62.013	ENSPMGG00000008000	rbfox3b	88	62.013	Periophthalmus_magnuspinnatus
ENSXETG00000020236	rbfox3	91	58.031	ENSPEMG00000010500	Rbfox3	100	62.398	Peromyscus_maniculatus_bairdii
ENSXETG00000020236	rbfox3	60	51.779	ENSPMAG00000008689	rbfox3b	99	52.569	Petromyzon_marinus
ENSXETG00000020236	rbfox3	90	63.780	ENSPCIG00000005766	RBFOX3	100	62.953	Phascolarctos_cinereus
ENSXETG00000020236	rbfox3	98	63.566	ENSPFOG00000018294	rbfox3b	100	52.605	Poecilia_formosa
ENSXETG00000020236	rbfox3	76	60.066	ENSPLAG00000000481	rbfox3b	78	60.066	Poecilia_latipinna
ENSXETG00000020236	rbfox3	85	58.333	ENSPMEG00000022997	rbfox3b	100	58.333	Poecilia_mexicana
ENSXETG00000020236	rbfox3	88	66.667	ENSPREG00000012886	rbfox3b	94	66.857	Poecilia_reticulata
ENSXETG00000020236	rbfox3	98	54.639	ENSPPYG00000008704	RBFOX3	100	52.956	Pongo_abelii
ENSXETG00000020236	rbfox3	81	60.465	ENSPCAG00000001401	RBFOX3	100	62.396	Procavia_capensis
ENSXETG00000020236	rbfox3	93	58.228	ENSPCOG00000012689	RBFOX3	100	62.117	Propithecus_coquereli
ENSXETG00000020236	rbfox3	61	81.429	ENSPVAG00000015243	RBFOX3	100	58.056	Pteropus_vampyrus
ENSXETG00000020236	rbfox3	90	59.384	ENSPNYG00000009079	-	87	58.263	Pundamilia_nyererei
ENSXETG00000020236	rbfox3	62	92.593	ENSPNYG00000010414	rbfox3b	73	92.593	Pundamilia_nyererei
ENSXETG00000020236	rbfox3	98	61.168	ENSPNAG00000002889	rbfox3a	89	65.537	Pygocentrus_nattereri
ENSXETG00000020236	rbfox3	85	50.299	ENSPNAG00000018173	rbfox3b	90	49.107	Pygocentrus_nattereri
ENSXETG00000020236	rbfox3	91	58.462	ENSRNOG00000003386	Rbfox3	100	66.962	Rattus_norvegicus
ENSXETG00000020236	rbfox3	88	66.762	ENSRBIG00000040449	RBFOX3	91	66.762	Rhinopithecus_bieti
ENSXETG00000020236	rbfox3	81	66.460	ENSRROG00000000766	RBFOX3	100	66.766	Rhinopithecus_roxellana
ENSXETG00000020236	rbfox3	91	58.247	ENSSBOG00000031591	RBFOX3	100	66.172	Saimiri_boliviensis_boliviensis
ENSXETG00000020236	rbfox3	98	64.938	ENSSHAG00000016076	RBFOX3	100	63.750	Sarcophilus_harrisii
ENSXETG00000020236	rbfox3	88	58.286	ENSSFOG00015004716	RBFOX3	92	58.571	Scleropages_formosus
ENSXETG00000020236	rbfox3	98	62.308	ENSSFOG00015023260	rbfox3a	98	57.714	Scleropages_formosus
ENSXETG00000020236	rbfox3	88	65.714	ENSSMAG00000019052	-	100	65.089	Scophthalmus_maximus
ENSXETG00000020236	rbfox3	98	60.644	ENSSMAG00000012618	rbfox3b	77	64.560	Scophthalmus_maximus
ENSXETG00000020236	rbfox3	85	58.333	ENSSDUG00000023183	rbfox3b	100	58.333	Seriola_dumerili
ENSXETG00000020236	rbfox3	98	59.184	ENSSDUG00000015801	-	96	58.929	Seriola_dumerili
ENSXETG00000020236	rbfox3	98	60.925	ENSSLDG00000016098	-	98	58.500	Seriola_lalandi_dorsalis
ENSXETG00000020236	rbfox3	88	67.147	ENSSLDG00000000149	rbfox3b	89	66.954	Seriola_lalandi_dorsalis
ENSXETG00000020236	rbfox3	81	69.565	ENSSPUG00000011733	RBFOX3	99	69.733	Sphenodon_punctatus
ENSXETG00000020236	rbfox3	74	59.122	ENSSPAG00000004898	-	79	57.877	Stegastes_partitus
ENSXETG00000020236	rbfox3	88	58.239	ENSSPAG00000017571	rbfox3b	87	58.239	Stegastes_partitus
ENSXETG00000020236	rbfox3	84	57.778	ENSSSCG00000039498	RBFOX3	100	59.104	Sus_scrofa
ENSXETG00000020236	rbfox3	98	59.799	ENSTRUG00000004894	rbfox3b	99	59.113	Takifugu_rubripes
ENSXETG00000020236	rbfox3	98	63.889	ENSTNIG00000011278	rbfox3b	99	63.889	Tetraodon_nigroviridis
ENSXETG00000020236	rbfox3	54	49.145	ENSTBEG00000004296	-	84	40.256	Tupaia_belangeri
ENSXETG00000020236	rbfox3	81	56.484	ENSTTRG00000003676	RBFOX3	100	57.382	Tursiops_truncatus
ENSXETG00000020236	rbfox3	81	66.149	ENSUAMG00000004668	RBFOX3	100	66.469	Ursus_americanus
ENSXETG00000020236	rbfox3	98	62.982	ENSVVUG00000017864	RBFOX3	100	66.172	Vulpes_vulpes
ENSXETG00000020236	rbfox3	88	66.954	ENSXCOG00000018262	rbfox3b	100	62.985	Xiphophorus_couchianus
ENSXETG00000020236	rbfox3	98	63.566	ENSXMAG00000012939	rbfox3b	88	67.147	Xiphophorus_maculatus