EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000020340 (Gene tree)
Gene ID: -
Gene Symbol: larp6
Alias: -
Full Name: Xenopus tropicalis La ribonucleoprotein domain family member 6 (larp6)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 23468 bases
Position: chrGL172754.1:208011-231478
Accession: NM_001008143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000043877	La	PF05383.17	9.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000043877	-	2131	-	ENSXETP00000043877	489 (aa)	-	F6VS84

Gene Model

Click here to download ENSXETG00000020340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000020340's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000020340	larp6	88	40.000	ENSXETG00000021887	larp6-like.1	92	39.825

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000020340	larp6	88	69.794	ENSG00000166173	LARP6	96	66.597	Homo_sapiens
ENSXETG00000020340	larp6	94	62.917	ENSAPOG00000021773	larp6a	68	63.158	Acanthochromis_polyacanthus
ENSXETG00000020340	larp6	85	69.740	ENSAMEG00000008897	LARP6	99	69.031	Ailuropoda_melanoleuca
ENSXETG00000020340	larp6	94	62.708	ENSACIG00000005166	larp6a	93	62.708	Amphilophus_citrinellus
ENSXETG00000020340	larp6	94	62.786	ENSAOCG00000002284	larp6a	68	63.025	Amphiprion_ocellaris
ENSXETG00000020340	larp6	94	62.786	ENSAPEG00000008077	larp6a	92	62.786	Amphiprion_percula
ENSXETG00000020340	larp6	94	62.994	ENSATEG00000004018	larp6a	67	63.235	Anabas_testudineus
ENSXETG00000020340	larp6	84	73.872	ENSAPLG00000009914	LARP6	99	73.872	Anas_platyrhynchos
ENSXETG00000020340	larp6	84	70.146	ENSACAG00000008613	LARP6	98	70.146	Anolis_carolinensis
ENSXETG00000020340	larp6	88	69.794	ENSANAG00000024860	LARP6	96	66.597	Aotus_nancymaae
ENSXETG00000020340	larp6	93	63.559	ENSACLG00000018561	larp6a	65	63.559	Astatotilapia_calliptera
ENSXETG00000020340	larp6	93	60.537	ENSAMXG00000029387	larp6a	73	61.983	Astyanax_mexicanus
ENSXETG00000020340	larp6	84	40.670	ENSAMXG00000036816	-	93	41.379	Astyanax_mexicanus
ENSXETG00000020340	larp6	88	68.650	ENSBTAG00000003915	LARP6	96	65.756	Bos_taurus
ENSXETG00000020340	larp6	92	67.234	ENSCJAG00000046236	-	95	66.596	Callithrix_jacchus
ENSXETG00000020340	larp6	87	70.302	ENSCJAG00000018642	-	95	67.021	Callithrix_jacchus
ENSXETG00000020340	larp6	85	71.090	ENSCAFG00000017616	LARP6	99	70.379	Canis_familiaris
ENSXETG00000020340	larp6	94	66.946	ENSCAFG00020007296	LARP6	97	66.318	Canis_lupus_dingo
ENSXETG00000020340	larp6	88	68.879	ENSCHIG00000013742	LARP6	96	65.966	Capra_hircus
ENSXETG00000020340	larp6	85	69.668	ENSTSYG00000028124	LARP6	86	69.668	Carlito_syrichta
ENSXETG00000020340	larp6	84	69.359	ENSCAPG00000015452	LARP6	99	68.646	Cavia_aperea
ENSXETG00000020340	larp6	93	65.481	ENSCPOG00000022687	LARP6	97	64.854	Cavia_porcellus
ENSXETG00000020340	larp6	93	67.017	ENSCCAG00000036320	LARP6	96	67.017	Cebus_capucinus
ENSXETG00000020340	larp6	88	69.794	ENSCATG00000042432	LARP6	96	66.597	Cercocebus_atys
ENSXETG00000020340	larp6	93	66.946	ENSCLAG00000007893	LARP6	97	66.736	Chinchilla_lanigera
ENSXETG00000020340	larp6	88	69.794	ENSCSAG00000013672	LARP6	96	66.597	Chlorocebus_sabaeus
ENSXETG00000020340	larp6	88	69.178	ENSCHOG00000003318	LARP6	99	66.318	Choloepus_hoffmanni
ENSXETG00000020340	larp6	96	71.458	ENSCPBG00000010771	LARP6	93	71.663	Chrysemys_picta_bellii
ENSXETG00000020340	larp6	85	70.616	ENSCANG00000025833	LARP6	99	69.905	Colobus_angolensis_palliatus
ENSXETG00000020340	larp6	93	65.966	ENSCGRG00001024472	Larp6	96	65.546	Cricetulus_griseus_chok1gshd
ENSXETG00000020340	larp6	93	65.966	ENSCGRG00000004527	Larp6	96	65.546	Cricetulus_griseus_crigri
ENSXETG00000020340	larp6	94	63.169	ENSCSEG00000011196	larp6a	70	63.410	Cynoglossus_semilaevis
ENSXETG00000020340	larp6	86	64.318	ENSCVAG00000009605	larp6a	69	62.791	Cyprinodon_variegatus
ENSXETG00000020340	larp6	93	61.702	ENSDARG00000005355	larp6a	97	64.846	Danio_rerio
ENSXETG00000020340	larp6	93	66.247	ENSDNOG00000042993	LARP6	97	66.038	Dasypus_novemcinctus
ENSXETG00000020340	larp6	93	63.789	ENSDORG00000023910	Larp6	97	63.789	Dipodomys_ordii
ENSXETG00000020340	larp6	67	72.381	ENSETEG00000020390	LARP6	78	64.639	Echinops_telfairi
ENSXETG00000020340	larp6	88	69.565	ENSEASG00005005490	LARP6	70	67.017	Equus_asinus_asinus
ENSXETG00000020340	larp6	88	69.565	ENSECAG00000014190	LARP6	96	68.721	Equus_caballus
ENSXETG00000020340	larp6	93	60.208	ENSELUG00000007341	larp6a	69	60.000	Esox_lucius
ENSXETG00000020340	larp6	98	64.128	ENSFCAG00000001361	LARP6	99	63.928	Felis_catus
ENSXETG00000020340	larp6	93	68.670	ENSFALG00000012389	LARP6	99	69.313	Ficedula_albicollis
ENSXETG00000020340	larp6	89	69.161	ENSFDAG00000019994	LARP6	86	68.254	Fukomys_damarensis
ENSXETG00000020340	larp6	93	62.236	ENSFHEG00000010312	larp6a	68	62.368	Fundulus_heteroclitus
ENSXETG00000020340	larp6	95	68.815	ENSGALG00000004046	LARP6	96	69.102	Gallus_gallus
ENSXETG00000020340	larp6	93	62.737	ENSGAFG00000009426	larp6a	68	63.067	Gambusia_affinis
ENSXETG00000020340	larp6	84	63.318	ENSGACG00000014622	larp6a	96	62.850	Gasterosteus_aculeatus
ENSXETG00000020340	larp6	88	69.977	ENSGAGG00000010802	LARP6	65	69.977	Gopherus_agassizii
ENSXETG00000020340	larp6	85	70.616	ENSGGOG00000024151	LARP6	99	69.905	Gorilla_gorilla
ENSXETG00000020340	larp6	93	63.559	ENSHBUG00000021014	larp6a	65	63.559	Haplochromis_burtoni
ENSXETG00000020340	larp6	88	71.396	ENSHGLG00000015112	LARP6	97	68.058	Heterocephalus_glaber_female
ENSXETG00000020340	larp6	85	72.275	ENSHGLG00100013159	LARP6	99	71.564	Heterocephalus_glaber_male
ENSXETG00000020340	larp6	94	61.538	ENSHCOG00000001241	larp6a	91	61.746	Hippocampus_comes
ENSXETG00000020340	larp6	92	37.174	ENSIPUG00000002828	-	99	36.695	Ictalurus_punctatus
ENSXETG00000020340	larp6	93	60.377	ENSIPUG00000010187	larp6	71	60.833	Ictalurus_punctatus
ENSXETG00000020340	larp6	88	69.336	ENSSTOG00000024279	LARP6	94	68.650	Ictidomys_tridecemlineatus
ENSXETG00000020340	larp6	95	66.804	ENSJJAG00000011013	Larp6	99	66.804	Jaculus_jaculus
ENSXETG00000020340	larp6	93	62.447	ENSKMAG00000001702	larp6a	64	62.900	Kryptolebias_marmoratus
ENSXETG00000020340	larp6	93	61.169	ENSLBEG00000000170	larp6a	90	61.169	Labrus_bergylta
ENSXETG00000020340	larp6	96	72.824	ENSLACG00000018706	LARP6	92	72.824	Latimeria_chalumnae
ENSXETG00000020340	larp6	83	42.326	ENSLACG00000002786	-	97	43.262	Latimeria_chalumnae
ENSXETG00000020340	larp6	85	43.115	ENSLOCG00000008547	-	84	42.166	Lepisosteus_oculatus
ENSXETG00000020340	larp6	94	63.636	ENSLOCG00000014592	larp6a	71	64.256	Lepisosteus_oculatus
ENSXETG00000020340	larp6	88	69.794	ENSLAFG00000016343	LARP6	97	69.108	Loxodonta_africana
ENSXETG00000020340	larp6	88	69.794	ENSMFAG00000035507	LARP6	97	69.108	Macaca_fascicularis
ENSXETG00000020340	larp6	88	69.794	ENSMMUG00000004429	LARP6	97	66.738	Macaca_mulatta
ENSXETG00000020340	larp6	88	69.794	ENSMNEG00000045335	LARP6	96	66.597	Macaca_nemestrina
ENSXETG00000020340	larp6	85	70.616	ENSMLEG00000038587	LARP6	99	69.905	Mandrillus_leucophaeus
ENSXETG00000020340	larp6	93	62.552	ENSMAMG00000005261	larp6a	67	62.552	Mastacembelus_armatus
ENSXETG00000020340	larp6	93	63.559	ENSMZEG00005005774	larp6a	65	63.559	Maylandia_zebra
ENSXETG00000020340	larp6	84	72.792	ENSMGAG00000005077	LARP6	99	72.792	Meleagris_gallopavo
ENSXETG00000020340	larp6	93	66.387	ENSMAUG00000018486	Larp6	96	66.387	Mesocricetus_auratus
ENSXETG00000020340	larp6	88	69.565	ENSMICG00000011234	LARP6	97	66.876	Microcebus_murinus
ENSXETG00000020340	larp6	93	66.176	ENSMOCG00000010492	Larp6	96	65.756	Microtus_ochrogaster
ENSXETG00000020340	larp6	94	62.708	ENSMMOG00000016284	larp6a	93	62.708	Mola_mola
ENSXETG00000020340	larp6	93	65.631	ENSMODG00000009034	LARP6	93	65.631	Monodelphis_domestica
ENSXETG00000020340	larp6	93	62.447	ENSMALG00000014439	larp6a	90	62.447	Monopterus_albus
ENSXETG00000020340	larp6	93	65.966	MGP_CAROLIEiJ_G0032314	Larp6	97	65.336	Mus_caroli
ENSXETG00000020340	larp6	93	65.756	ENSMUSG00000034839	Larp6	96	65.336	Mus_musculus
ENSXETG00000020340	larp6	93	65.756	MGP_PahariEiJ_G0015180	Larp6	96	65.336	Mus_pahari
ENSXETG00000020340	larp6	93	65.966	MGP_SPRETEiJ_G0033452	Larp6	96	65.546	Mus_spretus
ENSXETG00000020340	larp6	85	69.031	ENSMPUG00000017086	LARP6	99	68.322	Mustela_putorius_furo
ENSXETG00000020340	larp6	88	69.794	ENSMLUG00000010319	LARP6	96	66.597	Myotis_lucifugus
ENSXETG00000020340	larp6	88	68.879	ENSNGAG00000014238	Larp6	96	66.176	Nannospalax_galili
ENSXETG00000020340	larp6	93	63.559	ENSNBRG00000008120	larp6a	90	63.559	Neolamprologus_brichardi
ENSXETG00000020340	larp6	93	66.737	ENSNLEG00000013691	LARP6	96	66.737	Nomascus_leucogenys
ENSXETG00000020340	larp6	75	72.414	ENSMEUG00000002270	LARP6	83	72.881	Notamacropus_eugenii
ENSXETG00000020340	larp6	70	63.352	ENSOPRG00000004868	-	99	63.610	Ochotona_princeps
ENSXETG00000020340	larp6	87	67.599	ENSODEG00000015958	LARP6	96	65.672	Octodon_degus
ENSXETG00000020340	larp6	93	63.291	ENSONIG00000002901	larp6a	90	63.291	Oreochromis_niloticus
ENSXETG00000020340	larp6	81	66.085	ENSOCUG00000009306	LARP6	98	64.251	Oryctolagus_cuniculus
ENSXETG00000020340	larp6	93	63.103	ENSORLG00000014256	larp6a	93	63.103	Oryzias_latipes
ENSXETG00000020340	larp6	93	62.893	ENSORLG00020019657	larp6a	68	62.893	Oryzias_latipes_hni
ENSXETG00000020340	larp6	93	63.103	ENSORLG00015017915	larp6a	68	63.103	Oryzias_latipes_hsok
ENSXETG00000020340	larp6	93	63.312	ENSOMEG00000017049	larp6a	68	63.312	Oryzias_melastigma
ENSXETG00000020340	larp6	93	64.361	ENSOGAG00000000522	LARP6	97	65.828	Otolemur_garnettii
ENSXETG00000020340	larp6	85	69.740	ENSOARG00000018750	LARP6	98	69.267	Ovis_aries
ENSXETG00000020340	larp6	85	70.616	ENSPPAG00000031247	LARP6	99	69.905	Pan_paniscus
ENSXETG00000020340	larp6	98	64.128	ENSPPRG00000011282	LARP6	99	63.928	Panthera_pardus
ENSXETG00000020340	larp6	85	69.668	ENSPTIG00000015318	LARP6	86	68.957	Panthera_tigris_altaica
ENSXETG00000020340	larp6	88	69.794	ENSPTRG00000007234	LARP6	96	66.597	Pan_troglodytes
ENSXETG00000020340	larp6	88	69.794	ENSPANG00000016362	LARP6	96	66.597	Papio_anubis
ENSXETG00000020340	larp6	95	62.346	ENSPKIG00000020103	larp6a	91	62.346	Paramormyrops_kingsleyae
ENSXETG00000020340	larp6	93	57.841	ENSPKIG00000004511	LARP6	70	58.921	Paramormyrops_kingsleyae
ENSXETG00000020340	larp6	67	85.047	ENSPSIG00000009071	LARP6	92	78.814	Pelodiscus_sinensis
ENSXETG00000020340	larp6	93	63.291	ENSPMGG00000006958	larp6a	93	63.291	Periophthalmus_magnuspinnatus
ENSXETG00000020340	larp6	93	65.966	ENSPEMG00000012909	Larp6	96	65.966	Peromyscus_maniculatus_bairdii
ENSXETG00000020340	larp6	88	70.023	ENSPCIG00000020765	LARP6	96	65.060	Phascolarctos_cinereus
ENSXETG00000020340	larp6	93	62.526	ENSPFOG00000014175	larp6a	90	62.526	Poecilia_formosa
ENSXETG00000020340	larp6	93	62.658	ENSPLAG00000011105	larp6a	66	62.900	Poecilia_latipinna
ENSXETG00000020340	larp6	93	62.658	ENSPMEG00000011085	larp6a	66	63.034	Poecilia_mexicana
ENSXETG00000020340	larp6	93	62.025	ENSPREG00000008067	larp6a	67	62.393	Poecilia_reticulata
ENSXETG00000020340	larp6	88	69.794	ENSPPYG00000006604	LARP6	96	66.597	Pongo_abelii
ENSXETG00000020340	larp6	63	76.506	ENSPCAG00000014197	LARP6	75	76.506	Procavia_capensis
ENSXETG00000020340	larp6	93	65.481	ENSPCOG00000022934	LARP6	97	65.272	Propithecus_coquereli
ENSXETG00000020340	larp6	88	70.023	ENSPVAG00000005618	LARP6	96	66.807	Pteropus_vampyrus
ENSXETG00000020340	larp6	93	63.559	ENSPNYG00000009835	larp6a	90	63.559	Pundamilia_nyererei
ENSXETG00000020340	larp6	93	59.834	ENSPNAG00000017966	larp6a	79	60.870	Pygocentrus_nattereri
ENSXETG00000020340	larp6	93	66.176	ENSRNOG00000012438	Larp6	96	66.387	Rattus_norvegicus
ENSXETG00000020340	larp6	93	66.882	ENSRBIG00000032902	LARP6	95	66.237	Rhinopithecus_bieti
ENSXETG00000020340	larp6	88	69.794	ENSRROG00000043074	LARP6	96	66.597	Rhinopithecus_roxellana
ENSXETG00000020340	larp6	85	70.853	ENSSBOG00000024190	LARP6	99	70.142	Saimiri_boliviensis_boliviensis
ENSXETG00000020340	larp6	85	68.571	ENSSHAG00000018495	LARP6	99	68.571	Sarcophilus_harrisii
ENSXETG00000020340	larp6	83	63.658	ENSSFOG00015023268	larp6a	94	58.811	Scleropages_formosus
ENSXETG00000020340	larp6	94	57.962	ENSSFOG00015002254	LARP6	92	57.537	Scleropages_formosus
ENSXETG00000020340	larp6	94	63.093	ENSSMAG00000009953	larp6a	67	63.333	Scophthalmus_maximus
ENSXETG00000020340	larp6	94	62.423	ENSSDUG00000007438	larp6a	67	62.656	Seriola_dumerili
ENSXETG00000020340	larp6	94	62.423	ENSSLDG00000016647	larp6a	68	62.656	Seriola_lalandi_dorsalis
ENSXETG00000020340	larp6	84	75.060	ENSSPUG00000011312	LARP6	99	75.240	Sphenodon_punctatus
ENSXETG00000020340	larp6	94	62.786	ENSSPAG00000020502	larp6a	68	63.025	Stegastes_partitus
ENSXETG00000020340	larp6	88	68.879	ENSSSCG00000004974	LARP6	96	66.176	Sus_scrofa
ENSXETG00000020340	larp6	84	72.381	ENSTGUG00000005808	LARP6	99	72.381	Taeniopygia_guttata
ENSXETG00000020340	larp6	93	61.954	ENSTRUG00000003151	larp6a	70	62.162	Takifugu_rubripes
ENSXETG00000020340	larp6	93	60.341	ENSTNIG00000011926	larp6a	96	60.981	Tetraodon_nigroviridis
ENSXETG00000020340	larp6	84	69.194	ENSTBEG00000015077	LARP6	99	68.884	Tupaia_belangeri
ENSXETG00000020340	larp6	85	68.632	ENSUAMG00000010467	LARP6	85	67.925	Ursus_americanus
ENSXETG00000020340	larp6	88	68.623	ENSVVUG00000015227	LARP6	99	67.946	Vulpes_vulpes
ENSXETG00000020340	larp6	94	62.292	ENSXCOG00000012654	larp6a	96	62.292	Xiphophorus_couchianus
ENSXETG00000020340	larp6	93	62.791	ENSXMAG00000021015	larp6a	65	62.791	Xiphophorus_maculatus