EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000020397 (Gene tree)
Gene ID: -
Gene Symbol: gpatch4
Alias: -
Full Name: Xenopus tropicalis G-patch domain containing 4 (gpatch4)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 6640 bases
Position: chrGL173063.1:413928-420567
Accession: NM_203645
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000064071	G-patch	PF01585.23	3.2e-11	1	1
ENSXETP00000044005	G-patch	PF01585.23	3.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000044005	-	1508	XM_012953192	ENSXETP00000044005	323 (aa)	XP_012808646	UPI00006A0A13
ENSXETT00000061852	-	1057	-	ENSXETP00000064071	302 (aa)	-	F7ANJ4

Gene Model

Click here to download ENSXETG00000020397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000020397's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000020397	gpatch4	66	47.236	ENSG00000160818	GPATCH4	97	47.154	Homo_sapiens
ENSXETG00000020397	gpatch4	68	63.285	ENSAPOG00000008436	gpatch4	52	63.285	Acanthochromis_polyacanthus
ENSXETG00000020397	gpatch4	66	48.241	ENSAMEG00000014829	GPATCH4	58	42.205	Ailuropoda_melanoleuca
ENSXETG00000020397	gpatch4	72	74.286	ENSAOCG00000015494	gpatch4	55	74.286	Amphiprion_ocellaris
ENSXETG00000020397	gpatch4	71	61.644	ENSAPEG00000022243	gpatch4	53	63.462	Amphiprion_percula
ENSXETG00000020397	gpatch4	72	63.229	ENSATEG00000006359	gpatch4	76	50.774	Anabas_testudineus
ENSXETG00000020397	gpatch4	68	64.078	ENSACLG00000010456	gpatch4	51	70.238	Astatotilapia_calliptera
ENSXETG00000020397	gpatch4	64	47.917	ENSCJAG00000006048	GPATCH4	91	47.458	Callithrix_jacchus
ENSXETG00000020397	gpatch4	64	48.438	ENSCCAG00000036114	GPATCH4	91	47.458	Cebus_capucinus
ENSXETG00000020397	gpatch4	66	46.734	ENSCATG00000042152	GPATCH4	78	47.458	Cercocebus_atys
ENSXETG00000020397	gpatch4	68	66.341	ENSCPBG00000025803	GPATCH4	73	59.916	Chrysemys_picta_bellii
ENSXETG00000020397	gpatch4	87	44.318	ENSCING00000004717	-	96	42.000	Ciona_intestinalis
ENSXETG00000020397	gpatch4	58	47.126	ENSCSAVG00000003297	-	64	47.126	Ciona_savignyi
ENSXETG00000020397	gpatch4	66	46.734	ENSCANG00000030031	GPATCH4	78	47.458	Colobus_angolensis_palliatus
ENSXETG00000020397	gpatch4	66	57.000	ENSCSEG00000012030	gpatch4	57	57.000	Cynoglossus_semilaevis
ENSXETG00000020397	gpatch4	67	63.415	ENSDARG00000091931	gpatch4	86	58.182	Danio_rerio
ENSXETG00000020397	gpatch4	68	48.058	ENSDNOG00000034673	GPATCH4	57	40.959	Dasypus_novemcinctus
ENSXETG00000020397	gpatch4	63	38.500	FBgn0039829	CG15561	54	38.308	Drosophila_melanogaster
ENSXETG00000020397	gpatch4	56	39.888	ENSEBUG00000006498	-	55	39.888	Eptatretus_burgeri
ENSXETG00000020397	gpatch4	87	40.132	ENSEASG00005018284	GPATCH4	68	36.184	Equus_asinus_asinus
ENSXETG00000020397	gpatch4	65	49.239	ENSECAG00000011135	GPATCH4	72	42.308	Equus_caballus
ENSXETG00000020397	gpatch4	74	57.447	ENSELUG00000011900	gpatch4	52	59.574	Esox_lucius
ENSXETG00000020397	gpatch4	70	62.326	ENSFHEG00000003097	gpatch4	56	62.326	Fundulus_heteroclitus
ENSXETG00000020397	gpatch4	69	54.762	ENSGALG00000048365	GPATCH4	60	52.055	Gallus_gallus
ENSXETG00000020397	gpatch4	68	62.745	ENSGAFG00000021732	gpatch4	66	62.745	Gambusia_affinis
ENSXETG00000020397	gpatch4	67	62.439	ENSGACG00000013318	gpatch4	60	63.819	Gasterosteus_aculeatus
ENSXETG00000020397	gpatch4	71	64.019	ENSGAGG00000020710	GPATCH4	65	67.000	Gopherus_agassizii
ENSXETG00000020397	gpatch4	64	48.438	ENSGGOG00000000753	GPATCH4	78	47.458	Gorilla_gorilla
ENSXETG00000020397	gpatch4	68	64.563	ENSHBUG00000009675	gpatch4	50	70.238	Haplochromis_burtoni
ENSXETG00000020397	gpatch4	73	57.965	ENSHCOG00000007016	gpatch4	65	56.957	Hippocampus_comes
ENSXETG00000020397	gpatch4	70	62.911	ENSIPUG00000006348	gpatch4	69	58.962	Ictalurus_punctatus
ENSXETG00000020397	gpatch4	66	49.749	ENSSTOG00000020510	GPATCH4	88	50.407	Ictidomys_tridecemlineatus
ENSXETG00000020397	gpatch4	71	61.290	ENSKMAG00000015765	gpatch4	81	47.368	Kryptolebias_marmoratus
ENSXETG00000020397	gpatch4	68	61.033	ENSLBEG00000009364	-	83	51.087	Labrus_bergylta
ENSXETG00000020397	gpatch4	68	66.176	ENSLACG00000009700	GPATCH4	90	51.104	Latimeria_chalumnae
ENSXETG00000020397	gpatch4	68	56.459	ENSLOCG00000008820	gpatch4	83	44.969	Lepisosteus_oculatus
ENSXETG00000020397	gpatch4	64	47.917	ENSMFAG00000030965	GPATCH4	78	47.458	Macaca_fascicularis
ENSXETG00000020397	gpatch4	66	46.734	ENSMMUG00000002624	GPATCH4	78	47.458	Macaca_mulatta
ENSXETG00000020397	gpatch4	64	47.917	ENSMNEG00000028844	GPATCH4	78	47.458	Macaca_nemestrina
ENSXETG00000020397	gpatch4	64	47.396	ENSMLEG00000037909	GPATCH4	78	46.610	Mandrillus_leucophaeus
ENSXETG00000020397	gpatch4	77	56.800	ENSMZEG00005017452	gpatch4	52	65.347	Maylandia_zebra
ENSXETG00000020397	gpatch4	51	43.871	ENSMICG00000038615	-	81	46.465	Microcebus_murinus
ENSXETG00000020397	gpatch4	58	39.773	ENSMICG00000034025	-	93	44.068	Microcebus_murinus
ENSXETG00000020397	gpatch4	65	63.500	ENSMMOG00000017095	gpatch4	82	64.045	Mola_mola
ENSXETG00000020397	gpatch4	98	43.574	ENSMODG00000016818	-	66	53.769	Monodelphis_domestica
ENSXETG00000020397	gpatch4	66	53.266	ENSMODG00000014154	-	92	52.764	Monodelphis_domestica
ENSXETG00000020397	gpatch4	91	37.171	MGP_CAROLIEiJ_G0025152	Gpatch4	77	47.236	Mus_caroli
ENSXETG00000020397	gpatch4	91	37.710	ENSMUSG00000028069	Gpatch4	77	46.734	Mus_musculus
ENSXETG00000020397	gpatch4	75	40.329	MGP_PahariEiJ_G0026595	-	95	42.149	Mus_pahari
ENSXETG00000020397	gpatch4	98	35.647	MGP_SPRETEiJ_G0026093	Gpatch4	77	46.734	Mus_spretus
ENSXETG00000020397	gpatch4	66	47.739	ENSMEUG00000006861	-	68	47.739	Notamacropus_eugenii
ENSXETG00000020397	gpatch4	78	57.551	ENSONIG00000002261	gpatch4	63	57.551	Oreochromis_niloticus
ENSXETG00000020397	gpatch4	66	48.241	ENSOCUG00000025781	-	54	37.143	Oryctolagus_cuniculus
ENSXETG00000020397	gpatch4	68	61.722	ENSORLG00020013892	gpatch4	92	47.734	Oryzias_latipes_hni
ENSXETG00000020397	gpatch4	86	53.903	ENSORLG00015019725	gpatch4	91	49.847	Oryzias_latipes_hsok
ENSXETG00000020397	gpatch4	70	46.190	ENSOMEG00000000529	gpatch4	68	41.406	Oryzias_melastigma
ENSXETG00000020397	gpatch4	64	48.438	ENSPPAG00000028364	-	78	47.458	Pan_paniscus
ENSXETG00000020397	gpatch4	65	49.239	ENSPTIG00000006717	GPATCH4	79	48.305	Panthera_tigris_altaica
ENSXETG00000020397	gpatch4	64	48.438	ENSPTRG00000001464	GPATCH4	78	47.458	Pan_troglodytes
ENSXETG00000020397	gpatch4	64	47.917	ENSPANG00000018543	GPATCH4	78	47.458	Papio_anubis
ENSXETG00000020397	gpatch4	87	52.143	ENSPSIG00000011317	GPATCH4	70	64.706	Pelodiscus_sinensis
ENSXETG00000020397	gpatch4	64	63.317	ENSPMAG00000009175	gpatch4	68	63.317	Petromyzon_marinus
ENSXETG00000020397	gpatch4	82	56.420	ENSPFOG00000011835	gpatch4	66	56.202	Poecilia_formosa
ENSXETG00000020397	gpatch4	82	56.299	ENSPLAG00000019504	gpatch4	66	56.078	Poecilia_latipinna
ENSXETG00000020397	gpatch4	82	56.420	ENSPMEG00000001375	gpatch4	66	56.202	Poecilia_mexicana
ENSXETG00000020397	gpatch4	70	61.860	ENSPREG00000017029	gpatch4	90	47.892	Poecilia_reticulata
ENSXETG00000020397	gpatch4	58	39.429	ENSPCOG00000013948	-	88	41.667	Propithecus_coquereli
ENSXETG00000020397	gpatch4	57	43.860	ENSPCOG00000023130	-	76	50.000	Propithecus_coquereli
ENSXETG00000020397	gpatch4	71	45.794	ENSPVAG00000007505	-	50	44.393	Pteropus_vampyrus
ENSXETG00000020397	gpatch4	68	64.563	ENSPNYG00000018461	gpatch4	51	66.000	Pundamilia_nyererei
ENSXETG00000020397	gpatch4	66	46.734	ENSRBIG00000005742	GPATCH4	78	47.458	Rhinopithecus_bieti
ENSXETG00000020397	gpatch4	66	46.734	ENSRROG00000044157	GPATCH4	78	47.458	Rhinopithecus_roxellana
ENSXETG00000020397	gpatch4	66	47.236	ENSSBOG00000024840	GPATCH4	57	39.852	Saimiri_boliviensis_boliviensis
ENSXETG00000020397	gpatch4	66	50.251	ENSSHAG00000015436	-	67	50.251	Sarcophilus_harrisii
ENSXETG00000020397	gpatch4	74	57.317	ENSSMAG00000016329	gpatch4	62	52.555	Scophthalmus_maximus
ENSXETG00000020397	gpatch4	78	57.613	ENSSDUG00000006583	gpatch4	57	59.072	Seriola_dumerili
ENSXETG00000020397	gpatch4	78	57.613	ENSSLDG00000012365	gpatch4	57	59.072	Seriola_lalandi_dorsalis
ENSXETG00000020397	gpatch4	66	66.834	ENSSPUG00000002674	GPATCH4	66	66.332	Sphenodon_punctatus
ENSXETG00000020397	gpatch4	71	61.086	ENSSPAG00000011683	gpatch4	81	46.012	Stegastes_partitus
ENSXETG00000020397	gpatch4	70	58.447	ENSTNIG00000005156	gpatch4	75	58.904	Tetraodon_nigroviridis
ENSXETG00000020397	gpatch4	66	48.744	ENSUMAG00000017797	GPATCH4	56	42.085	Ursus_maritimus
ENSXETG00000020397	gpatch4	66	42.544	ENSVVUG00000006004	-	82	50.847	Vulpes_vulpes
ENSXETG00000020397	gpatch4	75	56.790	ENSXCOG00000003911	gpatch4	54	63.235	Xiphophorus_couchianus
ENSXETG00000020397	gpatch4	80	56.275	ENSXMAG00000024520	gpatch4	64	56.275	Xiphophorus_maculatus