EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000020406 (Gene tree)
Gene ID: -
Gene Symbol: raver2
Alias: -
Full Name: Xenopus tropicalis ribonucleoprotein%2C PTB binding 2 (raver2)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 32627 bases
Position: chrGL172640.1:5850047-5882673
Accession: NM_001079382
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000044031	RRM_1	PF00076.22	7.6e-25	1	2
ENSXETP00000044031	RRM_1	PF00076.22	7.6e-25	2	2
ENSXETP00000054468	RRM_1	PF00076.22	2.4e-23	1	2
ENSXETP00000054468	RRM_1	PF00076.22	2.4e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000044031	-	2682	XM_012961415	ENSXETP00000044031	641 (aa)	XP_012816869	F7DFU7
ENSXETT00000054468	-	2685	-	ENSXETP00000054468	642 (aa)	-	F7BQP7

Gene Model

Click here to download ENSXETG00000020406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000020406's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000020406	raver2	98	37.805	ENSXETG00000011622	raver1	86	37.651

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000020406	raver2	79	53.539	ENSG00000162437	RAVER2	86	57.143	Homo_sapiens
ENSXETG00000020406	raver2	90	43.016	ENSAPOG00000002766	raver2	72	43.016	Acanthochromis_polyacanthus
ENSXETG00000020406	raver2	79	53.818	ENSAMEG00000015178	RAVER2	87	53.818	Ailuropoda_melanoleuca
ENSXETG00000020406	raver2	73	44.156	ENSATEG00000019679	raver2	82	44.156	Anabas_testudineus
ENSXETG00000020406	raver2	81	54.093	ENSAPLG00000013160	RAVER2	92	54.093	Anas_platyrhynchos
ENSXETG00000020406	raver2	99	47.941	ENSACAG00000008443	RAVER2	91	49.046	Anolis_carolinensis
ENSXETG00000020406	raver2	79	52.450	ENSANAG00000025857	RAVER2	80	52.355	Aotus_nancymaae
ENSXETG00000020406	raver2	89	43.622	ENSAMXG00000010570	raver2	75	44.006	Astyanax_mexicanus
ENSXETG00000020406	raver2	82	52.734	ENSBTAG00000030686	RAVER2	86	52.734	Bos_taurus
ENSXETG00000020406	raver2	79	52.459	ENSCJAG00000016724	RAVER2	85	50.252	Callithrix_jacchus
ENSXETG00000020406	raver2	82	51.773	ENSCAFG00000018617	RAVER2	99	51.773	Canis_familiaris
ENSXETG00000020406	raver2	86	52.122	ENSCAFG00020018120	RAVER2	84	52.122	Canis_lupus_dingo
ENSXETG00000020406	raver2	79	53.273	ENSCHIG00000005514	RAVER2	80	53.273	Capra_hircus
ENSXETG00000020406	raver2	86	51.007	ENSTSYG00000006019	RAVER2	85	51.007	Carlito_syrichta
ENSXETG00000020406	raver2	73	41.313	ENSCAPG00000013527	RAVER2	90	50.852	Cavia_aperea
ENSXETG00000020406	raver2	98	41.029	ENSCPOG00000005986	RAVER2	94	42.059	Cavia_porcellus
ENSXETG00000020406	raver2	79	51.724	ENSCCAG00000029834	RAVER2	79	51.724	Cebus_capucinus
ENSXETG00000020406	raver2	79	52.641	ENSCATG00000040658	RAVER2	93	52.641	Cercocebus_atys
ENSXETG00000020406	raver2	79	45.872	ENSCLAG00000006590	RAVER2	89	45.872	Chinchilla_lanigera
ENSXETG00000020406	raver2	79	52.641	ENSCSAG00000001350	RAVER2	86	52.641	Chlorocebus_sabaeus
ENSXETG00000020406	raver2	83	52.595	ENSCHOG00000007668	RAVER2	83	52.595	Choloepus_hoffmanni
ENSXETG00000020406	raver2	98	65.934	ENSCPBG00000001015	RAVER2	79	65.934	Chrysemys_picta_bellii
ENSXETG00000020406	raver2	79	52.277	ENSCANG00000042311	RAVER2	84	52.277	Colobus_angolensis_palliatus
ENSXETG00000020406	raver2	79	52.110	ENSCGRG00001011852	Raver2	80	52.110	Cricetulus_griseus_chok1gshd
ENSXETG00000020406	raver2	53	52.059	ENSCSEG00000017839	raver2	82	52.059	Cynoglossus_semilaevis
ENSXETG00000020406	raver2	73	36.086	ENSCVAG00000002687	raver2	74	54.573	Cyprinodon_variegatus
ENSXETG00000020406	raver2	90	43.622	ENSDARG00000075034	raver2	71	44.532	Danio_rerio
ENSXETG00000020406	raver2	86	51.858	ENSDNOG00000012130	RAVER2	85	51.858	Dasypus_novemcinctus
ENSXETG00000020406	raver2	81	51.957	ENSDORG00000002498	Raver2	77	51.957	Dipodomys_ordii
ENSXETG00000020406	raver2	68	68.590	ENSETEG00000000706	RAVER2	75	68.590	Echinops_telfairi
ENSXETG00000020406	raver2	79	52.285	ENSEASG00005008158	RAVER2	87	52.285	Equus_asinus_asinus
ENSXETG00000020406	raver2	86	50.084	ENSECAG00000022014	RAVER2	93	50.084	Equus_caballus
ENSXETG00000020406	raver2	58	65.714	ENSELUG00000022384	raver2	70	65.714	Esox_lucius
ENSXETG00000020406	raver2	79	54.029	ENSFCAG00000022781	RAVER2	80	54.029	Felis_catus
ENSXETG00000020406	raver2	80	53.223	ENSFALG00000012634	RAVER2	91	53.125	Ficedula_albicollis
ENSXETG00000020406	raver2	73	49.602	ENSFDAG00000010721	RAVER2	78	49.602	Fukomys_damarensis
ENSXETG00000020406	raver2	91	40.119	ENSFHEG00000001322	raver2	74	42.665	Fundulus_heteroclitus
ENSXETG00000020406	raver2	54	64.596	ENSGMOG00000013535	raver2	62	62.275	Gadus_morhua
ENSXETG00000020406	raver2	81	54.874	ENSGALG00000033759	RAVER2	73	54.874	Gallus_gallus
ENSXETG00000020406	raver2	73	46.109	ENSGACG00000007122	raver2	81	46.471	Gasterosteus_aculeatus
ENSXETG00000020406	raver2	98	64.835	ENSGAGG00000018767	RAVER2	82	64.835	Gopherus_agassizii
ENSXETG00000020406	raver2	79	51.465	ENSGGOG00000016447	RAVER2	82	51.465	Gorilla_gorilla
ENSXETG00000020406	raver2	79	47.156	ENSHGLG00000018409	RAVER2	82	47.985	Heterocephalus_glaber_female
ENSXETG00000020406	raver2	79	46.972	ENSHGLG00100006640	RAVER2	91	54.213	Heterocephalus_glaber_male
ENSXETG00000020406	raver2	90	41.602	ENSHCOG00000005933	raver2	73	41.448	Hippocampus_comes
ENSXETG00000020406	raver2	90	45.840	ENSIPUG00000007082	raver2	69	50.313	Ictalurus_punctatus
ENSXETG00000020406	raver2	54	56.936	ENSSTOG00000009844	RAVER2	80	56.936	Ictidomys_tridecemlineatus
ENSXETG00000020406	raver2	85	49.485	ENSJJAG00000000374	Raver2	88	49.485	Jaculus_jaculus
ENSXETG00000020406	raver2	89	46.965	ENSLACG00000005188	RAVER2	81	46.965	Latimeria_chalumnae
ENSXETG00000020406	raver2	92	47.385	ENSLOCG00000006773	raver2	75	47.385	Lepisosteus_oculatus
ENSXETG00000020406	raver2	79	54.029	ENSLAFG00000012508	RAVER2	90	54.029	Loxodonta_africana
ENSXETG00000020406	raver2	79	53.176	ENSMFAG00000031436	RAVER2	89	52.364	Macaca_fascicularis
ENSXETG00000020406	raver2	79	53.176	ENSMMUG00000018565	RAVER2	93	52.459	Macaca_mulatta
ENSXETG00000020406	raver2	79	53.176	ENSMNEG00000033127	RAVER2	93	52.459	Macaca_nemestrina
ENSXETG00000020406	raver2	79	52.641	ENSMLEG00000036310	RAVER2	90	52.641	Mandrillus_leucophaeus
ENSXETG00000020406	raver2	50	56.347	ENSMAMG00000009059	raver2	69	57.055	Mastacembelus_armatus
ENSXETG00000020406	raver2	81	54.707	ENSMGAG00000011806	RAVER2	92	54.707	Meleagris_gallopavo
ENSXETG00000020406	raver2	79	50.912	ENSMAUG00000004248	Raver2	80	51.654	Mesocricetus_auratus
ENSXETG00000020406	raver2	79	53.818	ENSMICG00000029259	RAVER2	79	53.818	Microcebus_murinus
ENSXETG00000020406	raver2	79	51.642	ENSMOCG00000018087	Raver2	80	51.642	Microtus_ochrogaster
ENSXETG00000020406	raver2	79	54.356	ENSMODG00000001242	RAVER2	77	54.356	Monodelphis_domestica
ENSXETG00000020406	raver2	90	42.105	ENSMALG00000018093	raver2	75	42.105	Monopterus_albus
ENSXETG00000020406	raver2	79	52.477	MGP_CAROLIEiJ_G0026202	Raver2	78	60.556	Mus_caroli
ENSXETG00000020406	raver2	79	53.211	ENSMUSG00000035275	Raver2	78	60.833	Mus_musculus
ENSXETG00000020406	raver2	79	52.661	MGP_PahariEiJ_G0028539	Raver2	78	60.833	Mus_pahari
ENSXETG00000020406	raver2	79	53.211	MGP_SPRETEiJ_G0027171	Raver2	78	60.833	Mus_spretus
ENSXETG00000020406	raver2	79	54.212	ENSMPUG00000000717	RAVER2	87	54.212	Mustela_putorius_furo
ENSXETG00000020406	raver2	79	53.125	ENSMLUG00000007699	RAVER2	97	53.125	Myotis_lucifugus
ENSXETG00000020406	raver2	79	52.690	ENSNGAG00000000905	Raver2	80	52.690	Nannospalax_galili
ENSXETG00000020406	raver2	79	53.211	ENSNLEG00000015145	RAVER2	88	53.211	Nomascus_leucogenys
ENSXETG00000020406	raver2	79	45.887	ENSODEG00000005253	RAVER2	86	45.887	Octodon_degus
ENSXETG00000020406	raver2	99	45.234	ENSONIG00000008808	raver2	100	45.942	Oreochromis_niloticus
ENSXETG00000020406	raver2	79	54.446	ENSOANG00000008327	-	91	54.446	Ornithorhynchus_anatinus
ENSXETG00000020406	raver2	79	52.844	ENSOCUG00000006221	RAVER2	79	52.844	Oryctolagus_cuniculus
ENSXETG00000020406	raver2	79	52.102	ENSOGAG00000011157	RAVER2	90	52.095	Otolemur_garnettii
ENSXETG00000020406	raver2	79	53.273	ENSOARG00000010030	RAVER2	80	53.273	Ovis_aries
ENSXETG00000020406	raver2	79	53.358	ENSPPAG00000039189	RAVER2	82	53.358	Pan_paniscus
ENSXETG00000020406	raver2	79	54.029	ENSPPRG00000023350	RAVER2	80	54.029	Panthera_pardus
ENSXETG00000020406	raver2	79	54.029	ENSPTIG00000009389	RAVER2	79	54.029	Panthera_tigris_altaica
ENSXETG00000020406	raver2	79	53.005	ENSPTRG00000000824	RAVER2	85	52.727	Pan_troglodytes
ENSXETG00000020406	raver2	79	52.459	ENSPANG00000003396	RAVER2	84	50.084	Papio_anubis
ENSXETG00000020406	raver2	91	42.332	ENSPKIG00000019357	raver2	74	42.332	Paramormyrops_kingsleyae
ENSXETG00000020406	raver2	82	65.854	ENSPSIG00000010074	RAVER2	77	65.854	Pelodiscus_sinensis
ENSXETG00000020406	raver2	50	55.140	ENSPMGG00000017781	raver2	83	55.140	Periophthalmus_magnuspinnatus
ENSXETG00000020406	raver2	79	51.273	ENSPEMG00000001332	Raver2	80	51.273	Peromyscus_maniculatus_bairdii
ENSXETG00000020406	raver2	86	51.473	ENSPCIG00000020336	RAVER2	84	51.473	Phascolarctos_cinereus
ENSXETG00000020406	raver2	55	71.795	ENSPCAG00000000017	RAVER2	52	71.795	Procavia_capensis
ENSXETG00000020406	raver2	79	52.823	ENSPCOG00000028379	RAVER2	79	52.823	Propithecus_coquereli
ENSXETG00000020406	raver2	79	53.273	ENSPVAG00000007172	RAVER2	90	53.273	Pteropus_vampyrus
ENSXETG00000020406	raver2	75	40.734	ENSPNAG00000000962	raver2	83	40.459	Pygocentrus_nattereri
ENSXETG00000020406	raver2	79	52.030	ENSRNOG00000023812	Raver2	80	52.294	Rattus_norvegicus
ENSXETG00000020406	raver2	79	51.306	ENSRBIG00000044090	RAVER2	81	51.119	Rhinopithecus_bieti
ENSXETG00000020406	raver2	79	53.539	ENSRROG00000041867	RAVER2	79	53.539	Rhinopithecus_roxellana
ENSXETG00000020406	raver2	78	52.015	ENSSBOG00000023706	RAVER2	91	52.281	Saimiri_boliviensis_boliviensis
ENSXETG00000020406	raver2	86	51.515	ENSSHAG00000014568	RAVER2	99	52.234	Sarcophilus_harrisii
ENSXETG00000020406	raver2	95	41.896	ENSSFOG00015013015	raver2	80	43.421	Scleropages_formosus
ENSXETG00000020406	raver2	79	56.831	ENSSPUG00000016441	RAVER2	81	56.831	Sphenodon_punctatus
ENSXETG00000020406	raver2	50	55.728	ENSSPAG00000004134	raver2	74	55.728	Stegastes_partitus
ENSXETG00000020406	raver2	86	51.020	ENSSSCG00000025672	-	85	52.930	Sus_scrofa
ENSXETG00000020406	raver2	79	53.875	ENSTGUG00000009973	RAVER2	97	53.875	Taeniopygia_guttata
ENSXETG00000020406	raver2	60	55.183	ENSTRUG00000018541	raver2	66	54.354	Takifugu_rubripes
ENSXETG00000020406	raver2	73	45.325	ENSTNIG00000018106	raver2	83	45.325	Tetraodon_nigroviridis
ENSXETG00000020406	raver2	79	48.713	ENSTBEG00000009004	RAVER2	90	48.713	Tupaia_belangeri
ENSXETG00000020406	raver2	52	67.089	ENSTTRG00000009692	RAVER2	53	67.089	Tursiops_truncatus
ENSXETG00000020406	raver2	79	53.148	ENSUAMG00000007847	RAVER2	81	53.148	Ursus_americanus
ENSXETG00000020406	raver2	78	52.844	ENSUMAG00000008489	RAVER2	83	52.844	Ursus_maritimus
ENSXETG00000020406	raver2	86	52.122	ENSVVUG00000013993	RAVER2	93	52.122	Vulpes_vulpes