EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXETG00000020447 (Gene tree)
Gene ID
-
Gene Symbol
snrnp48
Alias
-
Full Name
Xenopus tropicalis small nuclear ribonucleoprotein%2C U11/U12 48KDa subunit (snrnp48)%2C mRNA.
Gene Type
protein_coding
Species
Xenopus_tropicalis
Status
putative
Strand
Minus strand
Length
8753 bases
Position
chrGL172669.1:2210492-2219244
Accession
NM_001142014
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXETP00000044146zf-U11-48KPF05253.123.2e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXETT00000044146-1847-ENSXETP00000044146336 (aa)-F7EU84
Gene Model
Click here to download ENSXETG00000020447's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000020447's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXETG00000020447snrnp489948.588ENSG00000168566SNRNP488951.911Homo_sapiens
ENSXETG00000020447snrnp489545.000ENSAPOG00000021430snrnp488747.403Acanthochromis_polyacanthus
ENSXETG00000020447snrnp489950.425ENSAMEG00000017349SNRNP489053.355Ailuropoda_melanoleuca
ENSXETG00000020447snrnp488645.455ENSACIG00000002032snrnp488842.718Amphilophus_citrinellus
ENSXETG00000020447snrnp487649.416ENSAOCG00000010562snrnp488347.735Amphiprion_ocellaris
ENSXETG00000020447snrnp487948.689ENSAPEG00000003231snrnp489047.368Amphiprion_percula
ENSXETG00000020447snrnp487150.420ENSATEG00000020210snrnp489046.865Anabas_testudineus
ENSXETG00000020447snrnp488560.204ENSACAG00000002811SNRNP488262.264Anolis_carolinensis
ENSXETG00000020447snrnp489949.153ENSANAG00000033538SNRNP488952.548Aotus_nancymaae
ENSXETG00000020447snrnp489043.464ENSAMXG00000015309snrnp489044.667Astyanax_mexicanus
ENSXETG00000020447snrnp489551.051ENSBTAG00000001123SNRNP488652.492Bos_taurus
ENSXETG00000020447snrnp489948.588ENSCJAG00000021330SNRNP488951.911Callithrix_jacchus
ENSXETG00000020447snrnp489750.888ENSCAFG00000009574SNRNP487253.000Canis_familiaris
ENSXETG00000020447snrnp489750.888ENSCAFG00020013203SNRNP488553.020Canis_lupus_dingo
ENSXETG00000020447snrnp489551.652ENSCHIG00000015216SNRNP488653.488Capra_hircus
ENSXETG00000020447snrnp489748.817ENSTSYG00000000698SNRNP488651.007Carlito_syrichta
ENSXETG00000020447snrnp489053.797ENSCAPG00000006768SNRNP489055.124Cavia_aperea
ENSXETG00000020447snrnp489752.071ENSCPOG00000007910SNRNP488853.115Cavia_porcellus
ENSXETG00000020447snrnp489948.870ENSCCAG00000035652SNRNP489051.899Cebus_capucinus
ENSXETG00000020447snrnp489948.588ENSCATG00000033947SNRNP488951.911Cercocebus_atys
ENSXETG00000020447snrnp489750.448ENSCLAG00000003765SNRNP488653.000Chinchilla_lanigera
ENSXETG00000020447snrnp489949.153ENSCSAG00000007409SNRNP488951.911Chlorocebus_sabaeus
ENSXETG00000020447snrnp488658.086ENSCPBG00000019146SNRNP488260.985Chrysemys_picta_bellii
ENSXETG00000020447snrnp489930.769ENSCING00000004121-7432.669Ciona_intestinalis
ENSXETG00000020447snrnp489948.870ENSCANG00000030017SNRNP488952.229Colobus_angolensis_palliatus
ENSXETG00000020447snrnp489750.595ENSCGRG00001001076-8652.349Cricetulus_griseus_chok1gshd
ENSXETG00000020447snrnp488644.595ENSCGRG00001008805-8345.745Cricetulus_griseus_chok1gshd
ENSXETG00000020447snrnp489750.595ENSCGRG00000007781Snrnp488652.349Cricetulus_griseus_crigri
ENSXETG00000020447snrnp488942.633ENSCSEG00000000722snrnp489541.369Cynoglossus_semilaevis
ENSXETG00000020447snrnp488848.013ENSCVAG00000019829snrnp487747.841Cyprinodon_variegatus
ENSXETG00000020447snrnp488046.667ENSDARG00000039989snrnp488746.780Danio_rerio
ENSXETG00000020447snrnp489751.462ENSDNOG00000014978SNRNP488653.618Dasypus_novemcinctus
ENSXETG00000020447snrnp489750.147ENSDORG00000015140Snrnp488652.174Dipodomys_ordii
ENSXETG00000020447snrnp489748.225ENSEASG00005012021SNRNP488651.007Equus_asinus_asinus
ENSXETG00000020447snrnp489748.817ENSECAG00000026937SNRNP488651.342Equus_caballus
ENSXETG00000020447snrnp489735.417ENSEEUG00000015437SNRNP488635.786Erinaceus_europaeus
ENSXETG00000020447snrnp488947.841ENSELUG00000009766snrnp488247.959Esox_lucius
ENSXETG00000020447snrnp489949.153ENSFCAG00000018853SNRNP488951.592Felis_catus
ENSXETG00000020447snrnp488852.475ENSFALG00000007797SNRNP488456.061Ficedula_albicollis
ENSXETG00000020447snrnp489748.521ENSFDAG00000009231SNRNP488854.098Fukomys_damarensis
ENSXETG00000020447snrnp486052.913ENSFHEG00000014647snrnp488649.035Fundulus_heteroclitus
ENSXETG00000020447snrnp486949.573ENSGMOG00000018599-9344.482Gadus_morhua
ENSXETG00000020447snrnp487857.090ENSGALG00000013005SNRNP488657.977Gallus_gallus
ENSXETG00000020447snrnp487550.388ENSGAFG00000021639snrnp488346.179Gambusia_affinis
ENSXETG00000020447snrnp487050.000ENSGACG00000017756-8943.478Gasterosteus_aculeatus
ENSXETG00000020447snrnp488658.416ENSGAGG00000000865SNRNP488561.364Gopherus_agassizii
ENSXETG00000020447snrnp489948.870ENSGGOG00000013220SNRNP488952.229Gorilla_gorilla
ENSXETG00000020447snrnp487646.591ENSHBUG00000017066snrnp488844.590Haplochromis_burtoni
ENSXETG00000020447snrnp489750.000ENSHGLG00000015241SNRNP488653.020Heterocephalus_glaber_female
ENSXETG00000020447snrnp489750.000ENSHGLG00100010027SNRNP488653.020Heterocephalus_glaber_male
ENSXETG00000020447snrnp487047.257ENSHCOG00000014066snrnp489042.532Hippocampus_comes
ENSXETG00000020447snrnp489749.853ENSSTOG00000014635SNRNP488652.824Ictidomys_tridecemlineatus
ENSXETG00000020447snrnp489749.853ENSJJAG00000011495Snrnp488653.488Jaculus_jaculus
ENSXETG00000020447snrnp488546.154ENSKMAG00000016514snrnp488446.154Kryptolebias_marmoratus
ENSXETG00000020447snrnp487649.416ENSLBEG00000026249snrnp488348.780Labrus_bergylta
ENSXETG00000020447snrnp489653.824ENSLACG00000003958SNRNP488853.595Latimeria_chalumnae
ENSXETG00000020447snrnp488250.360ENSLOCG00000004187snrnp488849.664Lepisosteus_oculatus
ENSXETG00000020447snrnp489748.673ENSLAFG00000011152SNRNP488652.174Loxodonta_africana
ENSXETG00000020447snrnp489948.870ENSMFAG00000045216SNRNP488952.229Macaca_fascicularis
ENSXETG00000020447snrnp489948.870ENSMMUG00000014785SNRNP488952.229Macaca_mulatta
ENSXETG00000020447snrnp489948.870ENSMNEG00000042269SNRNP488952.229Macaca_nemestrina
ENSXETG00000020447snrnp489948.870ENSMLEG00000034004SNRNP488952.229Mandrillus_leucophaeus
ENSXETG00000020447snrnp487151.037ENSMAMG00000018673snrnp487546.622Mastacembelus_armatus
ENSXETG00000020447snrnp488752.475ENSMGAG00000006037SNRNP488758.462Meleagris_gallopavo
ENSXETG00000020447snrnp489750.595ENSMAUG00000011944Snrnp488652.349Mesocricetus_auratus
ENSXETG00000020447snrnp489949.288ENSMICG00000012497SNRNP489051.118Microcebus_murinus
ENSXETG00000020447snrnp489751.786ENSMOCG00000015555Snrnp488653.691Microtus_ochrogaster
ENSXETG00000020447snrnp485452.717ENSMMOG00000003072-5852.717Mola_mola
ENSXETG00000020447snrnp488258.131ENSMODG00000009996SNRNP488257.705Monodelphis_domestica
ENSXETG00000020447snrnp487150.833ENSMALG00000005725snrnp489046.205Monopterus_albus
ENSXETG00000020447snrnp489751.929MGP_CAROLIEiJ_G0018441Snrnp488653.512Mus_caroli
ENSXETG00000020447snrnp489751.929ENSMUSG00000021431Snrnp488653.512Mus_musculus
ENSXETG00000020447snrnp489751.632MGP_PahariEiJ_G0019509Snrnp488653.512Mus_pahari
ENSXETG00000020447snrnp489751.929MGP_SPRETEiJ_G0019321Snrnp488652.843Mus_spretus
ENSXETG00000020447snrnp489751.183ENSNGAG00000004849Snrnp488653.020Nannospalax_galili
ENSXETG00000020447snrnp487646.591ENSNBRG00000012127snrnp488944.590Neolamprologus_brichardi
ENSXETG00000020447snrnp489948.870ENSNLEG00000011667SNRNP488952.229Nomascus_leucogenys
ENSXETG00000020447snrnp489449.695ENSOPRG00000015471SNRNP489452.751Ochotona_princeps
ENSXETG00000020447snrnp489342.188ENSONIG00000001520snrnp488943.607Oreochromis_niloticus
ENSXETG00000020447snrnp485347.030ENSOANG00000019888-9647.030Ornithorhynchus_anatinus
ENSXETG00000020447snrnp487952.920ENSOCUG00000005168SNRNP489553.356Oryctolagus_cuniculus
ENSXETG00000020447snrnp488846.465ENSORLG00000015654snrnp488646.205Oryzias_latipes
ENSXETG00000020447snrnp488846.801ENSORLG00020015976snrnp487346.535Oryzias_latipes_hni
ENSXETG00000020447snrnp488847.138ENSORLG00015022379snrnp487446.865Oryzias_latipes_hsok
ENSXETG00000020447snrnp488249.281ENSOMEG00000022007snrnp489146.795Oryzias_melastigma
ENSXETG00000020447snrnp488952.229ENSOGAG00000005275SNRNP488852.632Otolemur_garnettii
ENSXETG00000020447snrnp488754.392ENSOARG00000017319SNRNP488857.692Ovis_aries
ENSXETG00000020447snrnp489948.870ENSPPAG00000032873SNRNP488952.229Pan_paniscus
ENSXETG00000020447snrnp489949.153ENSPPRG00000004283SNRNP488951.592Panthera_pardus
ENSXETG00000020447snrnp488752.824ENSPTIG00000013502SNRNP488756.322Panthera_tigris_altaica
ENSXETG00000020447snrnp489948.870ENSPTRG00000017703SNRNP488952.229Pan_troglodytes
ENSXETG00000020447snrnp489948.870ENSPANG00000000771SNRNP488952.229Papio_anubis
ENSXETG00000020447snrnp489144.073ENSPKIG00000013703snrnp486147.059Paramormyrops_kingsleyae
ENSXETG00000020447snrnp488656.436ENSPSIG00000002213SNRNP488559.259Pelodiscus_sinensis
ENSXETG00000020447snrnp487150.000ENSPMGG00000008120snrnp488650.000Periophthalmus_magnuspinnatus
ENSXETG00000020447snrnp489751.190ENSPEMG00000008872Snrnp488653.020Peromyscus_maniculatus_bairdii
ENSXETG00000020447snrnp487749.811ENSPFOG00000003578snrnp488347.751Poecilia_formosa
ENSXETG00000020447snrnp486551.121ENSPLAG00000002290snrnp487651.121Poecilia_latipinna
ENSXETG00000020447snrnp487749.434ENSPMEG00000018033snrnp488347.405Poecilia_mexicana
ENSXETG00000020447snrnp487050.628ENSPREG00000018541snrnp488447.059Poecilia_reticulata
ENSXETG00000020447snrnp489948.870ENSPPYG00000016209SNRNP488952.229Pongo_abelii
ENSXETG00000020447snrnp487042.149ENSPCAG00000011991SNRNP489243.145Procavia_capensis
ENSXETG00000020447snrnp489750.294ENSPVAG00000002854SNRNP488553.846Pteropus_vampyrus
ENSXETG00000020447snrnp488345.791ENSPNYG00000015399snrnp489744.918Pundamilia_nyererei
ENSXETG00000020447snrnp489752.226ENSRNOG00000013756Snrnp488653.846Rattus_norvegicus
ENSXETG00000020447snrnp488351.689ENSRBIG00000043856SNRNP489751.899Rhinopithecus_bieti
ENSXETG00000020447snrnp489948.588ENSRROG00000043229SNRNP488951.911Rhinopithecus_roxellana
ENSXETG00000020447snrnp489949.153ENSSBOG00000019486SNRNP488952.548Saimiri_boliviensis_boliviensis
ENSXETG00000020447snrnp488258.076ENSSHAG00000014483SNRNP488857.655Sarcophilus_harrisii
ENSXETG00000020447snrnp487049.383ENSSFOG00015006610snrnp487044.595Scleropages_formosus
ENSXETG00000020447snrnp489547.500ENSSDUG00000014953snrnp489149.032Seriola_dumerili
ENSXETG00000020447snrnp489745.970ENSSLDG00000005989snrnp489148.377Seriola_lalandi_dorsalis
ENSXETG00000020447snrnp488855.410ENSSPUG00000006257SNRNP487659.851Sphenodon_punctatus
ENSXETG00000020447snrnp487150.209ENSSPAG00000006454snrnp488445.833Stegastes_partitus
ENSXETG00000020447snrnp488654.153ENSTGUG00000007575SNRNP488256.589Taeniopygia_guttata
ENSXETG00000020447snrnp487150.813ENSTRUG00000007031snrnp488846.078Takifugu_rubripes
ENSXETG00000020447snrnp489839.394ENSTNIG00000012977-8942.424Tetraodon_nigroviridis
ENSXETG00000020447snrnp487154.435ENSTBEG00000015620SNRNP487354.435Tupaia_belangeri
ENSXETG00000020447snrnp489951.282ENSTTRG00000016715SNRNP488953.376Tursiops_truncatus
ENSXETG00000020447snrnp489950.000ENSUAMG00000003690SNRNP488952.716Ursus_americanus
ENSXETG00000020447snrnp488753.846ENSVPAG00000003557SNRNP488756.371Vicugna_pacos
ENSXETG00000020447snrnp489751.320ENSVVUG00000004996SNRNP488553.488Vulpes_vulpes
ENSXETG00000020447snrnp489542.679ENSXCOG00000004478snrnp486850.673Xiphophorus_couchianus
ENSXETG00000020447snrnp487749.810ENSXMAG00000013595snrnp488348.097Xiphophorus_maculatus

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