EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000020622 (Gene tree)
Gene ID: -
Gene Symbol: rab39a
Alias: -
Full Name: RAB39A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 6364 bases
Position: chrGL172742.1:2664450-2670813
Accession: XB-GENE-1011717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000044563	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000044563	-	621	-	ENSXETP00000044563	206 (aa)	XP_002934692	F7CTE2

Gene Model

Click here to download ENSXETG00000020622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000020622's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000020622	rab39a	80	38.012	ENSXETG00000016176	rab7a	81	38.012
ENSXETG00000020622	rab39a	86	42.135	ENSXETG00000006639	rab11a	81	42.135
ENSXETG00000020622	rab39a	83	40.000	ENSXETG00000017184	rab2b	78	40.000
ENSXETG00000020622	rab39a	79	36.364	ENSXETG00000016920	rab33b	72	36.364
ENSXETG00000020622	rab39a	87	40.556	ENSXETG00000002201	rab15	84	40.556
ENSXETG00000020622	rab39a	100	44.131	ENSXETG00000032443	RAB39B	100	44.131
ENSXETG00000020622	rab39a	73	33.987	ENSXETG00000019257	rab34	59	33.987
ENSXETG00000020622	rab39a	97	36.000	ENSXETG00000030938	rab41	93	36.000
ENSXETG00000020622	rab39a	80	40.606	ENSXETG00000004556	rab18	79	40.606
ENSXETG00000020622	rab39a	79	38.037	ENSXETG00000008055	rab3b	80	38.365
ENSXETG00000020622	rab39a	82	38.286	ENSXETG00000018183	rab33a	80	38.286
ENSXETG00000020622	rab39a	84	33.146	ENSXETG00000022517	rerg	86	33.146
ENSXETG00000020622	rab39a	85	39.326	ENSXETG00000018133	rab9b	96	37.949
ENSXETG00000020622	rab39a	65	38.849	ENSXETG00000031363	-	65	38.849
ENSXETG00000020622	rab39a	89	30.319	ENSXETG00000005944	rab7b	92	30.319
ENSXETG00000020622	rab39a	85	42.135	ENSXETG00000020404	rab25	81	42.135
ENSXETG00000020622	rab39a	89	42.935	ENSXETG00000013633	rab30	89	42.935
ENSXETG00000020622	rab39a	81	37.427	ENSXETG00000002305	rab5a	76	37.427
ENSXETG00000020622	rab39a	82	36.686	ENSXETG00000004289	rab12	54	36.686
ENSXETG00000020622	rab39a	97	37.313	ENSXETG00000011370	rab35	97	37.313
ENSXETG00000020622	rab39a	83	42.105	ENSXETG00000014011	rab1a	84	42.105
ENSXETG00000020622	rab39a	73	30.464	ENSXETG00000006040	hras	85	30.488
ENSXETG00000020622	rab39a	84	32.759	ENSXETG00000004449	rab23	76	32.796
ENSXETG00000020622	rab39a	86	40.449	ENSXETG00000026943	rab35	93	40.212
ENSXETG00000020622	rab39a	85	39.779	ENSXETG00000013345	rab9a	89	39.779
ENSXETG00000020622	rab39a	78	40.964	ENSXETG00000023200	rab6a	86	40.964
ENSXETG00000020622	rab39a	76	36.420	ENSXETG00000014257	mgc75872	80	35.802
ENSXETG00000020622	rab39a	89	39.362	ENSXETG00000021890	rab11b.2	84	39.362
ENSXETG00000020622	rab39a	89	39.683	ENSXETG00000025484	rab11b.1	84	39.683
ENSXETG00000020622	rab39a	64	40.458	ENSXETG00000020729	rab13	81	40.458

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000020622	rab39a	96	48.500	ENSACIG00000016958	si:dkey-34d22.5	90	48.500	Amphilophus_citrinellus
ENSXETG00000020622	rab39a	84	54.286	ENSATEG00000010784	si:dkey-34d22.5	68	54.286	Anabas_testudineus
ENSXETG00000020622	rab39a	100	48.148	ENSCPBG00000011236	-	100	48.148	Chrysemys_picta_bellii
ENSXETG00000020622	rab39a	91	50.526	ENSCSEG00000019183	si:dkey-34d22.5	86	50.526	Cynoglossus_semilaevis
ENSXETG00000020622	rab39a	84	54.286	ENSCVAG00000017064	si:dkey-34d22.5	79	54.286	Cyprinodon_variegatus
ENSXETG00000020622	rab39a	83	40.462	ENSDARG00000100379	si:dkey-34d22.2	92	40.462	Danio_rerio
ENSXETG00000020622	rab39a	100	47.196	ENSFALG00000001373	-	100	47.196	Ficedula_albicollis
ENSXETG00000020622	rab39a	98	49.515	ENSFHEG00000012041	si:dkey-34d22.5	92	49.515	Fundulus_heteroclitus
ENSXETG00000020622	rab39a	86	57.627	ENSGALG00000000994	-	84	57.627	Gallus_gallus
ENSXETG00000020622	rab39a	98	49.029	ENSGAFG00000008183	si:dkey-34d22.5	93	49.029	Gambusia_affinis
ENSXETG00000020622	rab39a	86	51.977	ENSGAGG00000004918	-	87	51.977	Gopherus_agassizii
ENSXETG00000020622	rab39a	84	52.000	ENSHCOG00000015692	si:dkey-34d22.5	81	52.000	Hippocampus_comes
ENSXETG00000020622	rab39a	84	56.000	ENSKMAG00000012778	si:dkey-34d22.5	79	56.000	Kryptolebias_marmoratus
ENSXETG00000020622	rab39a	96	50.000	ENSLBEG00000002926	si:dkey-34d22.5	90	50.000	Labrus_bergylta
ENSXETG00000020622	rab39a	100	44.762	ENSLACG00000012674	si:dkey-34d22.5	100	44.762	Latimeria_chalumnae
ENSXETG00000020622	rab39a	86	55.932	ENSLOCG00000003467	si:dkey-34d22.5	82	55.932	Lepisosteus_oculatus
ENSXETG00000020622	rab39a	83	54.651	ENSMMOG00000006846	si:dkey-34d22.5	78	54.651	Mola_mola
ENSXETG00000020622	rab39a	96	51.500	ENSMALG00000013152	si:dkey-34d22.5	90	51.500	Monopterus_albus
ENSXETG00000020622	rab39a	98	49.254	ENSORLG00000014099	si:dkey-34d22.5	92	49.254	Oryzias_latipes
ENSXETG00000020622	rab39a	98	48.756	ENSORLG00020020277	si:dkey-34d22.5	92	48.756	Oryzias_latipes_hni
ENSXETG00000020622	rab39a	98	49.751	ENSORLG00015000142	si:dkey-34d22.5	92	49.751	Oryzias_latipes_hsok
ENSXETG00000020622	rab39a	84	53.714	ENSOMEG00000017958	si:dkey-34d22.5	92	48.276	Oryzias_melastigma
ENSXETG00000020622	rab39a	84	54.286	ENSPKIG00000021209	si:dkey-34d22.5	80	54.286	Paramormyrops_kingsleyae
ENSXETG00000020622	rab39a	92	51.852	ENSPSIG00000006606	-	94	51.852	Pelodiscus_sinensis
ENSXETG00000020622	rab39a	84	56.000	ENSPMGG00000001298	-	79	56.000	Periophthalmus_magnuspinnatus
ENSXETG00000020622	rab39a	99	49.261	ENSPCIG00000022399	-	92	49.261	Phascolarctos_cinereus
ENSXETG00000020622	rab39a	98	48.544	ENSPFOG00000014499	si:dkey-34d22.5	93	48.544	Poecilia_formosa
ENSXETG00000020622	rab39a	98	48.544	ENSPLAG00000007773	si:dkey-34d22.5	93	48.544	Poecilia_latipinna
ENSXETG00000020622	rab39a	98	48.544	ENSPMEG00000012932	si:dkey-34d22.5	93	48.544	Poecilia_mexicana
ENSXETG00000020622	rab39a	100	48.357	ENSSHAG00000008520	-	97	48.357	Sarcophilus_harrisii
ENSXETG00000020622	rab39a	98	46.262	ENSSFOG00015012088	rab42	96	46.262	Scleropages_formosus
ENSXETG00000020622	rab39a	84	53.714	ENSSLDG00000002646	si:dkey-34d22.5	79	53.714	Seriola_lalandi_dorsalis
ENSXETG00000020622	rab39a	84	54.286	ENSSPAG00000012955	si:dkey-34d22.5	79	54.286	Stegastes_partitus
ENSXETG00000020622	rab39a	98	49.515	ENSXCOG00000008410	si:dkey-34d22.5	93	49.515	Xiphophorus_couchianus
ENSXETG00000020622	rab39a	98	49.515	ENSXMAG00000029317	si:dkey-34d22.5	93	49.515	Xiphophorus_maculatus