EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000020720 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh2b
Alias: -
Full Name: Xenopus tropicalis ribonuclease H2 subunit B (rnaseh2b)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 12521 bases
Position: chrGL172869.1:1399295-1411815
Accession: NM_001016329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000044770	RNase_H2-Ydr279	PF09468.10	2.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000044770	-	1048	XM_012956950	ENSXETP00000044770	307 (aa)	XP_012812404	G8JLU1

Gene Model

Click here to download ENSXETG00000020720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000020720's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000020720	rnaseh2b	95	58.020	ENSG00000136104	RNASEH2B	98	58.845	Homo_sapiens
ENSXETG00000020720	rnaseh2b	100	57.143	ENSAPOG00000010496	rnaseh2b	99	57.143	Acanthochromis_polyacanthus
ENSXETG00000020720	rnaseh2b	92	56.643	ENSAMEG00000012040	RNASEH2B	97	56.643	Ailuropoda_melanoleuca
ENSXETG00000020720	rnaseh2b	100	47.727	ENSACIG00000021991	rnaseh2b	97	54.500	Amphilophus_citrinellus
ENSXETG00000020720	rnaseh2b	100	56.494	ENSAOCG00000013398	rnaseh2b	99	56.494	Amphiprion_ocellaris
ENSXETG00000020720	rnaseh2b	100	56.494	ENSAPEG00000006033	rnaseh2b	99	56.494	Amphiprion_percula
ENSXETG00000020720	rnaseh2b	100	56.169	ENSATEG00000008370	rnaseh2b	99	56.169	Anabas_testudineus
ENSXETG00000020720	rnaseh2b	89	69.231	ENSAPLG00000008955	RNASEH2B	100	69.231	Anas_platyrhynchos
ENSXETG00000020720	rnaseh2b	94	63.918	ENSACAG00000011679	RNASEH2B	98	63.918	Anolis_carolinensis
ENSXETG00000020720	rnaseh2b	95	57.338	ENSANAG00000020662	RNASEH2B	94	57.338	Aotus_nancymaae
ENSXETG00000020720	rnaseh2b	100	54.221	ENSACLG00000000467	rnaseh2b	99	54.221	Astatotilapia_calliptera
ENSXETG00000020720	rnaseh2b	100	56.026	ENSAMXG00000014351	rnaseh2b	99	56.026	Astyanax_mexicanus
ENSXETG00000020720	rnaseh2b	98	54.098	ENSBTAG00000020149	RNASEH2B	98	54.098	Bos_taurus
ENSXETG00000020720	rnaseh2b	94	57.045	ENSCJAG00000008585	-	96	57.045	Callithrix_jacchus
ENSXETG00000020720	rnaseh2b	77	52.321	ENSCJAG00000003822	-	87	52.321	Callithrix_jacchus
ENSXETG00000020720	rnaseh2b	92	55.634	ENSCAFG00000004295	RNASEH2B	92	55.634	Canis_familiaris
ENSXETG00000020720	rnaseh2b	97	54.849	ENSCAFG00020000250	RNASEH2B	97	54.849	Canis_lupus_dingo
ENSXETG00000020720	rnaseh2b	76	53.219	ENSCHIG00000012982	-	82	53.219	Capra_hircus
ENSXETG00000020720	rnaseh2b	98	52.492	ENSCHIG00000018220	RNASEH2B	98	53.488	Capra_hircus
ENSXETG00000020720	rnaseh2b	94	48.097	ENSTSYG00000031177	-	94	48.097	Carlito_syrichta
ENSXETG00000020720	rnaseh2b	92	56.338	ENSTSYG00000009176	-	92	56.338	Carlito_syrichta
ENSXETG00000020720	rnaseh2b	92	50.704	ENSCAPG00000009978	RNASEH2B	95	51.228	Cavia_aperea
ENSXETG00000020720	rnaseh2b	95	54.762	ENSCPOG00000032527	RNASEH2B	94	54.762	Cavia_porcellus
ENSXETG00000020720	rnaseh2b	95	57.679	ENSCCAG00000026979	RNASEH2B	96	57.732	Cebus_capucinus
ENSXETG00000020720	rnaseh2b	93	58.596	ENSCATG00000031336	RNASEH2B	80	58.596	Cercocebus_atys
ENSXETG00000020720	rnaseh2b	92	55.986	ENSCLAG00000003517	RNASEH2B	78	55.986	Chinchilla_lanigera
ENSXETG00000020720	rnaseh2b	97	57.143	ENSCSAG00000017701	RNASEH2B	90	57.143	Chlorocebus_sabaeus
ENSXETG00000020720	rnaseh2b	100	49.191	ENSCHOG00000013688	RNASEH2B	100	49.191	Choloepus_hoffmanni
ENSXETG00000020720	rnaseh2b	99	68.954	ENSCPBG00000008684	RNASEH2B	94	68.954	Chrysemys_picta_bellii
ENSXETG00000020720	rnaseh2b	94	35.452	ENSCING00000016454	-	95	35.452	Ciona_intestinalis
ENSXETG00000020720	rnaseh2b	95	57.627	ENSCANG00000041511	-	94	57.627	Colobus_angolensis_palliatus
ENSXETG00000020720	rnaseh2b	99	56.066	ENSCGRG00001000611	Rnaseh2b	98	56.066	Cricetulus_griseus_chok1gshd
ENSXETG00000020720	rnaseh2b	99	56.066	ENSCGRG00000006077	Rnaseh2b	98	56.066	Cricetulus_griseus_crigri
ENSXETG00000020720	rnaseh2b	99	55.229	ENSCSEG00000004910	rnaseh2b	99	55.229	Cynoglossus_semilaevis
ENSXETG00000020720	rnaseh2b	100	53.571	ENSCVAG00000005212	rnaseh2b	99	53.571	Cyprinodon_variegatus
ENSXETG00000020720	rnaseh2b	100	55.844	ENSDARG00000005128	rnaseh2b	99	55.844	Danio_rerio
ENSXETG00000020720	rnaseh2b	98	51.485	ENSDNOG00000034290	-	98	51.485	Dasypus_novemcinctus
ENSXETG00000020720	rnaseh2b	93	53.497	ENSDNOG00000049666	-	92	53.497	Dasypus_novemcinctus
ENSXETG00000020720	rnaseh2b	99	54.754	ENSDORG00000010708	Rnaseh2b	98	54.754	Dipodomys_ordii
ENSXETG00000020720	rnaseh2b	85	31.271	FBgn0030507	CG11164	84	31.271	Drosophila_melanogaster
ENSXETG00000020720	rnaseh2b	83	42.085	ENSEBUG00000005965	rnaseh2b	97	42.857	Eptatretus_burgeri
ENSXETG00000020720	rnaseh2b	99	56.066	ENSEASG00005017323	RNASEH2B	98	56.066	Equus_asinus_asinus
ENSXETG00000020720	rnaseh2b	99	55.738	ENSECAG00000014262	RNASEH2B	98	55.738	Equus_caballus
ENSXETG00000020720	rnaseh2b	100	53.571	ENSELUG00000019560	rnaseh2b	99	53.571	Esox_lucius
ENSXETG00000020720	rnaseh2b	93	54.704	ENSFCAG00000014257	RNASEH2B	89	54.704	Felis_catus
ENSXETG00000020720	rnaseh2b	93	64.111	ENSFALG00000008435	RNASEH2B	97	64.111	Ficedula_albicollis
ENSXETG00000020720	rnaseh2b	92	55.319	ENSFDAG00000009920	RNASEH2B	98	55.319	Fukomys_damarensis
ENSXETG00000020720	rnaseh2b	100	55.519	ENSFHEG00000012160	rnaseh2b	99	55.519	Fundulus_heteroclitus
ENSXETG00000020720	rnaseh2b	87	57.721	ENSGMOG00000016830	rnaseh2b	94	57.721	Gadus_morhua
ENSXETG00000020720	rnaseh2b	100	63.754	ENSGALG00000017015	RNASEH2B	100	63.754	Gallus_gallus
ENSXETG00000020720	rnaseh2b	100	53.571	ENSGAFG00000021222	rnaseh2b	99	53.571	Gambusia_affinis
ENSXETG00000020720	rnaseh2b	100	55.272	ENSGACG00000002821	rnaseh2b	99	55.272	Gasterosteus_aculeatus
ENSXETG00000020720	rnaseh2b	89	72.161	ENSGAGG00000014722	RNASEH2B	97	72.161	Gopherus_agassizii
ENSXETG00000020720	rnaseh2b	95	57.966	ENSGGOG00000001044	RNASEH2B	94	57.966	Gorilla_gorilla
ENSXETG00000020720	rnaseh2b	100	54.221	ENSHBUG00000006049	rnaseh2b	99	54.221	Haplochromis_burtoni
ENSXETG00000020720	rnaseh2b	92	56.338	ENSHGLG00100015953	RNASEH2B	96	56.338	Heterocephalus_glaber_male
ENSXETG00000020720	rnaseh2b	100	53.398	ENSHCOG00000003318	rnaseh2b	99	53.398	Hippocampus_comes
ENSXETG00000020720	rnaseh2b	99	54.754	ENSIPUG00000023815	rnaseh2b	99	54.754	Ictalurus_punctatus
ENSXETG00000020720	rnaseh2b	91	58.214	ENSSTOG00000015126	RNASEH2B	95	58.214	Ictidomys_tridecemlineatus
ENSXETG00000020720	rnaseh2b	93	56.993	ENSJJAG00000013335	Rnaseh2b	96	56.993	Jaculus_jaculus
ENSXETG00000020720	rnaseh2b	100	56.818	ENSKMAG00000002198	rnaseh2b	99	56.818	Kryptolebias_marmoratus
ENSXETG00000020720	rnaseh2b	99	57.516	ENSLBEG00000019331	rnaseh2b	99	57.516	Labrus_bergylta
ENSXETG00000020720	rnaseh2b	68	68.868	ENSLACG00000010782	RNASEH2B	91	68.282	Latimeria_chalumnae
ENSXETG00000020720	rnaseh2b	100	62.013	ENSLOCG00000009296	rnaseh2b	99	62.013	Lepisosteus_oculatus
ENSXETG00000020720	rnaseh2b	92	57.193	ENSLAFG00000030158	RNASEH2B	92	57.193	Loxodonta_africana
ENSXETG00000020720	rnaseh2b	96	57.966	ENSMFAG00000038464	-	95	57.966	Macaca_fascicularis
ENSXETG00000020720	rnaseh2b	96	52.881	ENSMMUG00000021746	RNASEH2B	94	52.881	Macaca_mulatta
ENSXETG00000020720	rnaseh2b	96	57.966	ENSMNEG00000030580	RNASEH2B	95	57.966	Macaca_nemestrina
ENSXETG00000020720	rnaseh2b	96	57.576	ENSMLEG00000043911	-	95	57.576	Mandrillus_leucophaeus
ENSXETG00000020720	rnaseh2b	100	56.494	ENSMAMG00000017109	rnaseh2b	99	56.494	Mastacembelus_armatus
ENSXETG00000020720	rnaseh2b	100	51.623	ENSMZEG00005021926	rnaseh2b	99	51.623	Maylandia_zebra
ENSXETG00000020720	rnaseh2b	93	65.625	ENSMGAG00000015025	RNASEH2B	100	65.625	Meleagris_gallopavo
ENSXETG00000020720	rnaseh2b	94	57.732	ENSMAUG00000016520	Rnaseh2b	96	56.902	Mesocricetus_auratus
ENSXETG00000020720	rnaseh2b	96	56.040	ENSMICG00000000528	RNASEH2B	96	56.040	Microcebus_murinus
ENSXETG00000020720	rnaseh2b	100	53.896	ENSMMOG00000019799	rnaseh2b	99	59.233	Mola_mola
ENSXETG00000020720	rnaseh2b	96	66.667	ENSMODG00000010775	RNASEH2B	97	66.667	Monodelphis_domestica
ENSXETG00000020720	rnaseh2b	100	56.818	ENSMALG00000004463	rnaseh2b	100	56.818	Monopterus_albus
ENSXETG00000020720	rnaseh2b	73	60.889	MGP_CAROLIEiJ_G0019389	Rnaseh2b	82	60.889	Mus_caroli
ENSXETG00000020720	rnaseh2b	99	54.221	ENSMUSG00000021932	Rnaseh2b	99	54.221	Mus_musculus
ENSXETG00000020720	rnaseh2b	99	45.058	MGP_PahariEiJ_G0030407	-	99	45.058	Mus_pahari
ENSXETG00000020720	rnaseh2b	73	53.333	ENSMPUG00000018010	RNASEH2B	94	53.333	Mustela_putorius_furo
ENSXETG00000020720	rnaseh2b	99	56.393	ENSMLUG00000004065	-	98	56.393	Myotis_lucifugus
ENSXETG00000020720	rnaseh2b	100	53.896	ENSNBRG00000003253	rnaseh2b	99	53.896	Neolamprologus_brichardi
ENSXETG00000020720	rnaseh2b	95	57.627	ENSNLEG00000003804	RNASEH2B	94	57.627	Nomascus_leucogenys
ENSXETG00000020720	rnaseh2b	92	64.912	ENSMEUG00000003665	RNASEH2B	98	64.912	Notamacropus_eugenii
ENSXETG00000020720	rnaseh2b	52	59.006	ENSOPRG00000003695	-	51	59.006	Ochotona_princeps
ENSXETG00000020720	rnaseh2b	68	53.589	ENSODEG00000005412	-	85	53.589	Octodon_degus
ENSXETG00000020720	rnaseh2b	95	56.314	ENSODEG00000006793	-	95	56.314	Octodon_degus
ENSXETG00000020720	rnaseh2b	100	54.221	ENSONIG00000006657	rnaseh2b	99	54.221	Oreochromis_niloticus
ENSXETG00000020720	rnaseh2b	93	65.862	ENSOANG00000015537	RNASEH2B	100	65.862	Ornithorhynchus_anatinus
ENSXETG00000020720	rnaseh2b	95	55.782	ENSOCUG00000008904	RNASEH2B	92	55.782	Oryctolagus_cuniculus
ENSXETG00000020720	rnaseh2b	99	55.082	ENSORLG00000011850	rnaseh2b	100	55.082	Oryzias_latipes
ENSXETG00000020720	rnaseh2b	99	55.410	ENSORLG00020012081	rnaseh2b	100	55.410	Oryzias_latipes_hni
ENSXETG00000020720	rnaseh2b	99	55.082	ENSORLG00015015468	rnaseh2b	100	55.082	Oryzias_latipes_hsok
ENSXETG00000020720	rnaseh2b	99	55.738	ENSOMEG00000012441	rnaseh2b	100	55.738	Oryzias_melastigma
ENSXETG00000020720	rnaseh2b	94	56.357	ENSOGAG00000016486	RNASEH2B	97	56.357	Otolemur_garnettii
ENSXETG00000020720	rnaseh2b	92	55.124	ENSOARG00000008701	RNASEH2B	95	55.124	Ovis_aries
ENSXETG00000020720	rnaseh2b	89	58.845	ENSPPAG00000026374	RNASEH2B	96	55.963	Pan_paniscus
ENSXETG00000020720	rnaseh2b	96	54.027	ENSPPRG00000012450	RNASEH2B	97	54.027	Panthera_pardus
ENSXETG00000020720	rnaseh2b	88	56.777	ENSPTIG00000013918	RNASEH2B	97	56.777	Panthera_tigris_altaica
ENSXETG00000020720	rnaseh2b	95	57.966	ENSPTRG00000005886	RNASEH2B	95	62.000	Pan_troglodytes
ENSXETG00000020720	rnaseh2b	96	57.576	ENSPANG00000022424	-	95	57.576	Papio_anubis
ENSXETG00000020720	rnaseh2b	99	55.410	ENSPKIG00000013386	rnaseh2b	99	55.229	Paramormyrops_kingsleyae
ENSXETG00000020720	rnaseh2b	62	66.667	ENSPSIG00000002224	RNASEH2B	87	66.667	Pelodiscus_sinensis
ENSXETG00000020720	rnaseh2b	64	63.265	ENSPMGG00000010299	rnaseh2b	95	63.265	Periophthalmus_magnuspinnatus
ENSXETG00000020720	rnaseh2b	99	56.393	ENSPEMG00000019721	Rnaseh2b	98	56.393	Peromyscus_maniculatus_bairdii
ENSXETG00000020720	rnaseh2b	93	60.976	ENSPCIG00000014535	-	96	60.976	Phascolarctos_cinereus
ENSXETG00000020720	rnaseh2b	100	54.839	ENSPFOG00000016722	rnaseh2b	99	54.839	Poecilia_formosa
ENSXETG00000020720	rnaseh2b	100	54.870	ENSPLAG00000011755	rnaseh2b	99	54.870	Poecilia_latipinna
ENSXETG00000020720	rnaseh2b	100	55.195	ENSPMEG00000002721	rnaseh2b	99	55.195	Poecilia_mexicana
ENSXETG00000020720	rnaseh2b	100	55.195	ENSPREG00000007737	rnaseh2b	99	55.195	Poecilia_reticulata
ENSXETG00000020720	rnaseh2b	97	57.475	ENSPPYG00000005378	RNASEH2B	96	57.475	Pongo_abelii
ENSXETG00000020720	rnaseh2b	96	56.711	ENSPCOG00000026623	RNASEH2B	96	56.711	Propithecus_coquereli
ENSXETG00000020720	rnaseh2b	80	57.490	ENSPVAG00000000508	RNASEH2B	93	57.490	Pteropus_vampyrus
ENSXETG00000020720	rnaseh2b	100	54.545	ENSPNYG00000013552	rnaseh2b	99	54.545	Pundamilia_nyererei
ENSXETG00000020720	rnaseh2b	100	54.221	ENSPNAG00000024825	rnaseh2b	99	54.221	Pygocentrus_nattereri
ENSXETG00000020720	rnaseh2b	99	54.072	ENSRNOG00000009192	Rnaseh2b	99	54.072	Rattus_norvegicus
ENSXETG00000020720	rnaseh2b	95	51.027	ENSRBIG00000036017	-	95	51.027	Rhinopithecus_bieti
ENSXETG00000020720	rnaseh2b	95	58.362	ENSRBIG00000028928	-	94	58.362	Rhinopithecus_bieti
ENSXETG00000020720	rnaseh2b	95	58.362	ENSRROG00000018808	-	94	58.362	Rhinopithecus_roxellana
ENSXETG00000020720	rnaseh2b	73	47.321	ENSRROG00000044915	-	84	47.748	Rhinopithecus_roxellana
ENSXETG00000020720	rnaseh2b	95	57.338	ENSSBOG00000008081	RNASEH2B	96	59.630	Saimiri_boliviensis_boliviensis
ENSXETG00000020720	rnaseh2b	100	64.610	ENSSHAG00000016190	RNASEH2B	100	64.610	Sarcophilus_harrisii
ENSXETG00000020720	rnaseh2b	100	55.844	ENSSFOG00015010190	rnaseh2b	100	55.844	Scleropages_formosus
ENSXETG00000020720	rnaseh2b	100	56.494	ENSSMAG00000001546	rnaseh2b	99	56.494	Scophthalmus_maximus
ENSXETG00000020720	rnaseh2b	100	58.117	ENSSDUG00000007567	rnaseh2b	99	58.117	Seriola_dumerili
ENSXETG00000020720	rnaseh2b	100	57.143	ENSSLDG00000012485	rnaseh2b	99	57.143	Seriola_lalandi_dorsalis
ENSXETG00000020720	rnaseh2b	86	66.917	ENSSPUG00000006745	-	95	66.917	Sphenodon_punctatus
ENSXETG00000020720	rnaseh2b	100	58.442	ENSSPAG00000020926	rnaseh2b	99	58.442	Stegastes_partitus
ENSXETG00000020720	rnaseh2b	89	56.777	ENSSSCG00000024385	RNASEH2B	95	60.000	Sus_scrofa
ENSXETG00000020720	rnaseh2b	89	66.667	ENSTGUG00000012104	RNASEH2B	100	66.667	Taeniopygia_guttata
ENSXETG00000020720	rnaseh2b	100	58.442	ENSTRUG00000015098	rnaseh2b	99	58.442	Takifugu_rubripes
ENSXETG00000020720	rnaseh2b	100	54.369	ENSTNIG00000013861	rnaseh2b	99	54.369	Tetraodon_nigroviridis
ENSXETG00000020720	rnaseh2b	91	51.064	ENSTTRG00000010761	RNASEH2B	95	49.495	Tursiops_truncatus
ENSXETG00000020720	rnaseh2b	92	57.746	ENSUAMG00000022849	RNASEH2B	96	59.259	Ursus_americanus
ENSXETG00000020720	rnaseh2b	92	57.042	ENSUMAG00000018556	RNASEH2B	96	58.519	Ursus_maritimus
ENSXETG00000020720	rnaseh2b	91	56.786	ENSVPAG00000005679	RNASEH2B	97	56.786	Vicugna_pacos
ENSXETG00000020720	rnaseh2b	92	54.930	ENSVVUG00000024015	RNASEH2B	84	54.930	Vulpes_vulpes
ENSXETG00000020720	rnaseh2b	100	52.597	ENSXCOG00000018732	rnaseh2b	99	52.597	Xiphophorus_couchianus
ENSXETG00000020720	rnaseh2b	100	54.545	ENSXMAG00000022554	rnaseh2b	99	54.545	Xiphophorus_maculatus