EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000020729 (Gene tree)
Gene ID: -
Gene Symbol: rab13
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 4385 bases
Position: chrGL173419.1:138408-142792
Accession: XB-GENE-6070728
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000044787	GTP_EFTU	PF00009.27	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000060218	-	1650	-	ENSXETP00000061768	160 (aa)	-	F6PJA9
ENSXETT00000044787	-	1649	-	ENSXETP00000044787	160 (aa)	-	F7D5D8

Gene Model

Click here to download ENSXETG00000020729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000020729's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000020729	rab13	74	33.065	ENSXETG00000030983	RASL11A	51	32.258
ENSXETG00000020729	rab13	84	42.222	ENSXETG00000021890	rab11b.2	61	42.222
ENSXETG00000020729	rab13	76	36.800	ENSXETG00000014257	mgc75872	63	36.000
ENSXETG00000020729	rab13	78	40.800	ENSXETG00000030938	rab41	59	40.800
ENSXETG00000020729	rab13	74	39.024	ENSXETG00000022517	rerg	60	39.024
ENSXETG00000020729	rab13	84	46.269	ENSXETG00000017184	rab2b	62	46.269
ENSXETG00000020729	rab13	96	48.734	ENSXETG00000002201	rab15	70	50.000
ENSXETG00000020729	rab13	87	51.799	ENSXETG00000014011	rab1a	67	51.799
ENSXETG00000020729	rab13	84	45.926	ENSXETG00000020404	rab25	63	45.926
ENSXETG00000020729	rab13	74	39.496	ENSXETG00000014935	ralb	70	38.636
ENSXETG00000020729	rab13	81	44.961	ENSXETG00000011370	rab35	64	44.961
ENSXETG00000020729	rab13	78	43.077	ENSXETG00000018183	rab33a	60	43.077
ENSXETG00000020729	rab13	98	32.515	ENSXETG00000013345	rab9a	66	34.328
ENSXETG00000020729	rab13	84	42.963	ENSXETG00000025484	rab11b.1	61	42.963
ENSXETG00000020729	rab13	94	32.468	ENSXETG00000005944	rab7b	68	36.957
ENSXETG00000020729	rab13	78	48.000	ENSXETG00000013633	rab30	62	48.000
ENSXETG00000020729	rab13	79	33.858	ENSXETG00000007760	rap2b	70	33.858
ENSXETG00000020729	rab13	84	46.324	ENSXETG00000032443	RAB39B	64	46.324
ENSXETG00000020729	rab13	81	40.458	ENSXETG00000020622	rab39a	64	40.458
ENSXETG00000020729	rab13	68	36.111	ENSXETG00000031363	-	52	36.111
ENSXETG00000020729	rab13	86	37.589	ENSXETG00000004449	rab23	57	37.589
ENSXETG00000020729	rab13	80	41.985	ENSXETG00000016920	rab33b	57	41.985
ENSXETG00000020729	rab13	99	46.296	ENSXETG00000008055	rab3b	68	50.746
ENSXETG00000020729	rab13	81	35.338	ENSXETG00000016176	rab7a	64	35.338
ENSXETG00000020729	rab13	98	43.478	ENSXETG00000026943	rab35	64	49.612
ENSXETG00000020729	rab13	78	40.800	ENSXETG00000023200	rab6a	66	40.800
ENSXETG00000020729	rab13	84	44.030	ENSXETG00000006639	rab11a	62	44.030
ENSXETG00000020729	rab13	84	36.765	ENSXETG00000005505	MRAS	65	36.765
ENSXETG00000020729	rab13	80	38.281	ENSXETG00000002305	rab5a	59	38.281
ENSXETG00000020729	rab13	74	37.815	ENSXETG00000021449	nras	64	36.000
ENSXETG00000020729	rab13	81	37.313	ENSXETG00000018133	rab9b	66	37.313
ENSXETG00000020729	rab13	94	34.211	ENSXETG00000006040	hras	68	36.923
ENSXETG00000020729	rab13	81	43.846	ENSXETG00000004556	rab18	63	43.846
ENSXETG00000020729	rab13	74	37.815	ENSXETG00000003398	kras	63	37.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000020729	rab13	99	78.882	ENSG00000143545	RAB13	85	78.846	Homo_sapiens
ENSXETG00000020729	rab13	86	78.261	ENSACIG00000008584	rab13	66	78.261	Amphilophus_citrinellus
ENSXETG00000020729	rab13	99	78.882	ENSANAG00000030247	-	71	81.944	Aotus_nancymaae
ENSXETG00000020729	rab13	100	73.913	ENSAMXG00000030712	rab13	68	81.159	Astyanax_mexicanus
ENSXETG00000020729	rab13	99	77.019	ENSBTAG00000017604	RAB13	70	80.420	Bos_taurus
ENSXETG00000020729	rab13	85	45.255	WBGene00019317	K02E10.1	63	45.255	Caenorhabditis_elegans
ENSXETG00000020729	rab13	89	80.420	ENSCJAG00000009933	-	70	80.420	Callithrix_jacchus
ENSXETG00000020729	rab13	99	77.640	ENSCHIG00000022271	-	71	80.556	Capra_hircus
ENSXETG00000020729	rab13	94	75.316	ENSCPOG00000011491	-	67	84.444	Cavia_porcellus
ENSXETG00000020729	rab13	99	78.882	ENSCCAG00000028502	-	71	81.944	Cebus_capucinus
ENSXETG00000020729	rab13	99	78.882	ENSCATG00000041779	-	71	81.944	Cercocebus_atys
ENSXETG00000020729	rab13	99	74.534	ENSCLAG00000006603	-	67	84.444	Chinchilla_lanigera
ENSXETG00000020729	rab13	99	78.882	ENSCANG00000036573	-	71	81.944	Colobus_angolensis_palliatus
ENSXETG00000020729	rab13	99	78.261	ENSCGRG00001021505	Rab13	70	81.119	Cricetulus_griseus_chok1gshd
ENSXETG00000020729	rab13	99	78.261	ENSCGRG00000012126	Rab13	70	81.119	Cricetulus_griseus_crigri
ENSXETG00000020729	rab13	100	71.875	ENSCSEG00000002358	rab13	69	78.986	Cynoglossus_semilaevis
ENSXETG00000020729	rab13	100	75.625	ENSDARG00000034771	rab13	69	81.884	Danio_rerio
ENSXETG00000020729	rab13	99	75.776	ENSDORG00000001591	Rab13	70	79.720	Dipodomys_ordii
ENSXETG00000020729	rab13	99	78.882	ENSEASG00005000683	-	71	81.944	Equus_asinus_asinus
ENSXETG00000020729	rab13	99	78.882	ENSECAG00000016551	RAB13	71	81.944	Equus_caballus
ENSXETG00000020729	rab13	100	71.605	ENSEEUG00000001233	-	71	74.483	Erinaceus_europaeus
ENSXETG00000020729	rab13	100	72.671	ENSELUG00000012801	rab13	69	79.710	Esox_lucius
ENSXETG00000020729	rab13	99	73.913	ENSFCAG00000045269	-	70	78.322	Felis_catus
ENSXETG00000020729	rab13	57	86.813	ENSFDAG00000014469	-	69	86.813	Fukomys_damarensis
ENSXETG00000020729	rab13	100	70.807	ENSFHEG00000021221	rab13	78	76.389	Fundulus_heteroclitus
ENSXETG00000020729	rab13	100	72.500	ENSGACG00000011925	rab13	70	77.622	Gasterosteus_aculeatus
ENSXETG00000020729	rab13	100	79.375	ENSGAGG00000000742	-	73	81.507	Gopherus_agassizii
ENSXETG00000020729	rab13	99	78.882	ENSGGOG00000023693	RAB13	71	81.944	Gorilla_gorilla
ENSXETG00000020729	rab13	99	73.750	ENSHGLG00000008749	RAB13	71	79.167	Heterocephalus_glaber_female
ENSXETG00000020729	rab13	99	73.750	ENSHGLG00100013608	RAB13	71	79.167	Heterocephalus_glaber_male
ENSXETG00000020729	rab13	100	67.500	ENSHCOG00000007440	rab13	77	78.571	Hippocampus_comes
ENSXETG00000020729	rab13	100	70.000	ENSIPUG00000003199	rab13	68	79.137	Ictalurus_punctatus
ENSXETG00000020729	rab13	99	77.019	ENSSTOG00000011222	-	70	81.119	Ictidomys_tridecemlineatus
ENSXETG00000020729	rab13	99	75.776	ENSJJAG00000010575	Rab13	67	85.185	Jaculus_jaculus
ENSXETG00000020729	rab13	100	71.250	ENSKMAG00000001908	rab13	66	81.452	Kryptolebias_marmoratus
ENSXETG00000020729	rab13	100	73.750	ENSLBEG00000026779	rab13	69	81.159	Labrus_bergylta
ENSXETG00000020729	rab13	84	69.630	ENSLACG00000008103	-	76	69.630	Latimeria_chalumnae
ENSXETG00000020729	rab13	99	78.882	ENSMFAG00000041018	RAB13	71	81.944	Macaca_fascicularis
ENSXETG00000020729	rab13	99	78.882	ENSMNEG00000028951	-	71	81.944	Macaca_nemestrina
ENSXETG00000020729	rab13	99	78.882	ENSMLEG00000042247	-	71	81.944	Mandrillus_leucophaeus
ENSXETG00000020729	rab13	100	71.875	ENSMAMG00000014602	rab13	72	78.102	Mastacembelus_armatus
ENSXETG00000020729	rab13	99	78.882	ENSMAUG00000015713	Rab13	67	85.185	Mesocricetus_auratus
ENSXETG00000020729	rab13	99	77.019	ENSMICG00000010340	-	71	81.250	Microcebus_murinus
ENSXETG00000020729	rab13	99	78.261	ENSMOCG00000021448	Rab13	70	81.119	Microtus_ochrogaster
ENSXETG00000020729	rab13	99	78.750	ENSMODG00000017295	-	60	82.517	Monodelphis_domestica
ENSXETG00000020729	rab13	98	76.101	MGP_CAROLIEiJ_G0025227	Rab13	70	78.322	Mus_caroli
ENSXETG00000020729	rab13	98	75.472	ENSMUSG00000027935	Rab13	71	78.322	Mus_musculus
ENSXETG00000020729	rab13	98	76.101	MGP_PahariEiJ_G0026671	Rab13	74	77.181	Mus_pahari
ENSXETG00000020729	rab13	99	76.398	ENSNGAG00000010309	Rab13	71	79.021	Nannospalax_galili
ENSXETG00000020729	rab13	100	73.125	ENSNBRG00000004124	rab13	70	79.137	Neolamprologus_brichardi
ENSXETG00000020729	rab13	99	78.882	ENSNLEG00000028944	-	67	86.260	Nomascus_leucogenys
ENSXETG00000020729	rab13	99	78.882	ENSMEUG00000009667	-	70	82.517	Notamacropus_eugenii
ENSXETG00000020729	rab13	53	88.235	ENSODEG00000012634	-	67	88.235	Octodon_degus
ENSXETG00000020729	rab13	94	74.051	ENSODEG00000010443	-	67	82.222	Octodon_degus
ENSXETG00000020729	rab13	100	71.429	ENSONIG00000006340	rab13	67	80.741	Oreochromis_niloticus
ENSXETG00000020729	rab13	84	84.444	ENSOCUG00000006286	-	76	84.444	Oryctolagus_cuniculus
ENSXETG00000020729	rab13	100	73.125	ENSOMEG00000008210	rab13	69	81.159	Oryzias_melastigma
ENSXETG00000020729	rab13	99	75.155	ENSOGAG00000016969	-	67	82.222	Otolemur_garnettii
ENSXETG00000020729	rab13	99	78.882	ENSPPAG00000028435	-	71	81.944	Pan_paniscus
ENSXETG00000020729	rab13	99	73.913	ENSPPRG00000008865	-	70	78.322	Panthera_pardus
ENSXETG00000020729	rab13	99	78.882	ENSPTRG00000001370	RAB13	71	81.944	Pan_troglodytes
ENSXETG00000020729	rab13	99	78.882	ENSPANG00000004479	-	71	81.944	Papio_anubis
ENSXETG00000020729	rab13	100	72.500	ENSPMGG00000007680	rab13	69	79.710	Periophthalmus_magnuspinnatus
ENSXETG00000020729	rab13	99	78.882	ENSPCIG00000029350	-	70	82.517	Phascolarctos_cinereus
ENSXETG00000020729	rab13	84	79.259	ENSPLAG00000005832	RAB13	72	79.259	Poecilia_latipinna
ENSXETG00000020729	rab13	87	78.417	ENSPREG00000017567	rab13	69	78.417	Poecilia_reticulata
ENSXETG00000020729	rab13	99	78.882	ENSPPYG00000000790	-	71	81.944	Pongo_abelii
ENSXETG00000020729	rab13	99	78.261	ENSPCOG00000012189	-	71	81.944	Propithecus_coquereli
ENSXETG00000020729	rab13	99	76.398	ENSPVAG00000011095	-	71	80.420	Pteropus_vampyrus
ENSXETG00000020729	rab13	84	81.481	ENSPNAG00000004189	rab13	71	81.481	Pygocentrus_nattereri
ENSXETG00000020729	rab13	99	77.019	ENSRNOG00000016733	Rab13	70	79.021	Rattus_norvegicus
ENSXETG00000020729	rab13	99	78.882	ENSRBIG00000008552	-	71	81.944	Rhinopithecus_bieti
ENSXETG00000020729	rab13	99	78.882	ENSRROG00000036885	-	71	81.944	Rhinopithecus_roxellana
ENSXETG00000020729	rab13	99	78.261	ENSSBOG00000020342	-	71	81.944	Saimiri_boliviensis_boliviensis
ENSXETG00000020729	rab13	99	79.503	ENSSHAG00000011866	-	67	85.401	Sarcophilus_harrisii
ENSXETG00000020729	rab13	99	77.019	ENSSSCG00000006564	-	70	80.420	Sus_scrofa
ENSXETG00000020729	rab13	100	72.500	ENSTRUG00000024177	rab13	69	78.986	Takifugu_rubripes
ENSXETG00000020729	rab13	99	79.503	ENSTBEG00000012734	-	71	82.639	Tupaia_belangeri
ENSXETG00000020729	rab13	99	78.261	ENSTTRG00000011183	-	70	80.420	Tursiops_truncatus
ENSXETG00000020729	rab13	84	77.778	ENSXCOG00000019533	rab13	72	77.778	Xiphophorus_couchianus