EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000020781 (Gene tree)
Gene ID: -
Gene Symbol: utp23
Alias: -
Full Name: Xenopus tropicalis UTP23%2C small subunit processome component (utp23)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 3064 bases
Position: chrGL173183.1:414022-417085
Accession: NM_001045669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000044898	Fcf1	PF04900.12	7.7e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000044898	-	840	-	ENSXETP00000044898	246 (aa)	-	F7E6P3

Gene Model

Click here to download ENSXETG00000020781's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000020781's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000020781	utp23	90	70.270	ENSG00000147679	UTP23	90	79.032	Homo_sapiens
ENSXETG00000020781	utp23	59	55.782	ENSAPOG00000013233	UTP23	63	53.061	Acanthochromis_polyacanthus
ENSXETG00000020781	utp23	84	62.201	ENSAPOG00000004620	utp23	83	60.287	Acanthochromis_polyacanthus
ENSXETG00000020781	utp23	59	55.782	ENSAPOG00000004608	-	69	53.061	Acanthochromis_polyacanthus
ENSXETG00000020781	utp23	90	69.369	ENSAMEG00000010317	UTP23	84	69.231	Ailuropoda_melanoleuca
ENSXETG00000020781	utp23	84	65.072	ENSACIG00000013638	utp23	79	62.679	Amphilophus_citrinellus
ENSXETG00000020781	utp23	84	62.201	ENSAOCG00000016307	utp23	83	60.287	Amphiprion_ocellaris
ENSXETG00000020781	utp23	84	62.201	ENSAPEG00000018976	utp23	83	60.287	Amphiprion_percula
ENSXETG00000020781	utp23	90	62.500	ENSATEG00000007509	utp23	82	62.201	Anabas_testudineus
ENSXETG00000020781	utp23	91	72.197	ENSACAG00000011061	UTP23	82	74.396	Anolis_carolinensis
ENSXETG00000020781	utp23	90	70.270	ENSANAG00000025273	-	84	68.269	Aotus_nancymaae
ENSXETG00000020781	utp23	90	70.721	ENSANAG00000036252	-	81	68.269	Aotus_nancymaae
ENSXETG00000020781	utp23	97	60.581	ENSAMXG00000020989	utp23	82	58.852	Astyanax_mexicanus
ENSXETG00000020781	utp23	51	30.469	ENSAMXG00000042249	fcf1	63	30.469	Astyanax_mexicanus
ENSXETG00000020781	utp23	90	68.919	ENSBTAG00000040422	UTP23	84	67.788	Bos_taurus
ENSXETG00000020781	utp23	87	42.326	WBGene00016411	C34E10.10	84	41.827	Caenorhabditis_elegans
ENSXETG00000020781	utp23	90	70.270	ENSCJAG00000005903	UTP23	84	67.788	Callithrix_jacchus
ENSXETG00000020781	utp23	90	69.369	ENSCAFG00000000821	UTP23	84	69.231	Canis_familiaris
ENSXETG00000020781	utp23	90	69.369	ENSCAFG00020004174	UTP23	84	69.231	Canis_lupus_dingo
ENSXETG00000020781	utp23	90	69.369	ENSCHIG00000019828	UTP23	84	68.269	Capra_hircus
ENSXETG00000020781	utp23	51	30.233	ENSTSYG00000029819	-	59	30.233	Carlito_syrichta
ENSXETG00000020781	utp23	90	68.919	ENSTSYG00000001644	UTP23	84	66.346	Carlito_syrichta
ENSXETG00000020781	utp23	90	69.369	ENSCPOG00000034561	UTP23	77	67.788	Cavia_porcellus
ENSXETG00000020781	utp23	93	67.249	ENSCCAG00000030228	UTP23	92	66.812	Cebus_capucinus
ENSXETG00000020781	utp23	90	69.369	ENSCATG00000035129	UTP23	84	67.308	Cercocebus_atys
ENSXETG00000020781	utp23	90	68.919	ENSCLAG00000005108	-	84	67.788	Chinchilla_lanigera
ENSXETG00000020781	utp23	93	61.304	ENSCLAG00000000531	-	91	62.981	Chinchilla_lanigera
ENSXETG00000020781	utp23	90	69.369	ENSCSAG00000010933	UTP23	84	67.308	Chlorocebus_sabaeus
ENSXETG00000020781	utp23	91	68.610	ENSCHOG00000003145	UTP23	83	70.531	Choloepus_hoffmanni
ENSXETG00000020781	utp23	89	75.455	ENSCPBG00000001634	UTP23	83	76.329	Chrysemys_picta_bellii
ENSXETG00000020781	utp23	84	48.325	ENSCING00000012577	-	94	48.325	Ciona_intestinalis
ENSXETG00000020781	utp23	84	47.847	ENSCSAVG00000003273	-	95	47.115	Ciona_savignyi
ENSXETG00000020781	utp23	90	69.820	ENSCANG00000028461	UTP23	78	68.269	Colobus_angolensis_palliatus
ENSXETG00000020781	utp23	90	67.117	ENSCGRG00001005218	Utp23	84	67.308	Cricetulus_griseus_chok1gshd
ENSXETG00000020781	utp23	88	61.644	ENSCSEG00000011409	utp23	81	62.679	Cynoglossus_semilaevis
ENSXETG00000020781	utp23	87	63.256	ENSCVAG00000003180	utp23	81	60.287	Cyprinodon_variegatus
ENSXETG00000020781	utp23	51	30.469	ENSCVAG00000013298	fcf1	63	30.469	Cyprinodon_variegatus
ENSXETG00000020781	utp23	51	30.469	ENSDARG00000102333	fcf1	63	30.469	Danio_rerio
ENSXETG00000020781	utp23	98	59.671	ENSDARG00000105012	utp23	81	60.577	Danio_rerio
ENSXETG00000020781	utp23	90	69.058	ENSDNOG00000033602	UTP23	83	70.192	Dasypus_novemcinctus
ENSXETG00000020781	utp23	95	59.227	ENSDORG00000029054	-	77	61.353	Dipodomys_ordii
ENSXETG00000020781	utp23	94	42.735	FBgn0031361	CG17652	83	43.478	Drosophila_melanogaster
ENSXETG00000020781	utp23	95	46.809	ENSETEG00000017109	-	73	50.820	Echinops_telfairi
ENSXETG00000020781	utp23	94	64.655	ENSETEG00000015401	-	83	67.633	Echinops_telfairi
ENSXETG00000020781	utp23	86	54.245	ENSEBUG00000009876	utp23	90	53.140	Eptatretus_burgeri
ENSXETG00000020781	utp23	51	30.469	ENSEBUG00000010373	fcf1	61	30.469	Eptatretus_burgeri
ENSXETG00000020781	utp23	90	68.326	ENSEASG00005023141	UTP23	84	69.082	Equus_asinus_asinus
ENSXETG00000020781	utp23	90	68.778	ENSECAG00000026844	UTP23	84	69.565	Equus_caballus
ENSXETG00000020781	utp23	100	65.587	ENSEEUG00000004503	UTP23	99	65.182	Erinaceus_europaeus
ENSXETG00000020781	utp23	97	60.833	ENSELUG00000005602	utp23	83	62.019	Esox_lucius
ENSXETG00000020781	utp23	90	69.369	ENSFCAG00000036051	UTP23	84	70.192	Felis_catus
ENSXETG00000020781	utp23	89	70.721	ENSFALG00000002299	UTP23	83	71.498	Ficedula_albicollis
ENSXETG00000020781	utp23	84	69.712	ENSFDAG00000021034	UTP23	83	67.788	Fukomys_damarensis
ENSXETG00000020781	utp23	90	61.883	ENSFHEG00000008581	utp23	82	60.386	Fundulus_heteroclitus
ENSXETG00000020781	utp23	94	56.277	ENSGMOG00000015495	utp23	87	58.937	Gadus_morhua
ENSXETG00000020781	utp23	89	69.091	ENSGALG00000032400	UTP23	84	70.048	Gallus_gallus
ENSXETG00000020781	utp23	84	63.636	ENSGAFG00000002063	utp23	80	61.244	Gambusia_affinis
ENSXETG00000020781	utp23	51	31.250	ENSGACG00000005774	fcf1	63	31.250	Gasterosteus_aculeatus
ENSXETG00000020781	utp23	84	59.330	ENSGACG00000002979	utp23	84	57.416	Gasterosteus_aculeatus
ENSXETG00000020781	utp23	90	69.820	ENSGGOG00000013203	UTP23	84	67.788	Gorilla_gorilla
ENSXETG00000020781	utp23	90	63.393	ENSHBUG00000023376	utp23	82	62.201	Haplochromis_burtoni
ENSXETG00000020781	utp23	87	70.093	ENSHGLG00000004025	UTP23	83	67.308	Heterocephalus_glaber_female
ENSXETG00000020781	utp23	87	61.682	ENSHGLG00000008717	-	84	61.165	Heterocephalus_glaber_female
ENSXETG00000020781	utp23	87	67.290	ENSHGLG00000020901	-	78	64.423	Heterocephalus_glaber_female
ENSXETG00000020781	utp23	83	62.745	ENSHGLG00100012817	-	93	61.058	Heterocephalus_glaber_male
ENSXETG00000020781	utp23	87	70.093	ENSHGLG00100018875	UTP23	83	67.308	Heterocephalus_glaber_male
ENSXETG00000020781	utp23	77	61.376	ENSHCOG00000007006	utp23	84	59.615	Hippocampus_comes
ENSXETG00000020781	utp23	89	61.086	ENSIPUG00000014437	utp23	82	60.287	Ictalurus_punctatus
ENSXETG00000020781	utp23	51	30.469	ENSIPUG00000008200	fcf1	63	30.469	Ictalurus_punctatus
ENSXETG00000020781	utp23	84	69.712	ENSSTOG00000001411	UTP23	84	67.788	Ictidomys_tridecemlineatus
ENSXETG00000020781	utp23	51	30.469	ENSKMAG00000002055	fcf1	63	30.469	Kryptolebias_marmoratus
ENSXETG00000020781	utp23	93	58.190	ENSKMAG00000002262	utp23	82	61.722	Kryptolebias_marmoratus
ENSXETG00000020781	utp23	84	62.857	ENSLBEG00000012819	utp23	81	60.952	Labrus_bergylta
ENSXETG00000020781	utp23	89	71.946	ENSLACG00000014611	UTP23	83	71.981	Latimeria_chalumnae
ENSXETG00000020781	utp23	95	65.812	ENSLOCG00000003289	utp23	82	67.633	Lepisosteus_oculatus
ENSXETG00000020781	utp23	94	66.953	ENSLAFG00000001282	UTP23	84	69.712	Loxodonta_africana
ENSXETG00000020781	utp23	51	30.000	ENSMFAG00000007477	-	66	30.000	Macaca_fascicularis
ENSXETG00000020781	utp23	90	69.820	ENSMFAG00000003374	UTP23	84	67.788	Macaca_fascicularis
ENSXETG00000020781	utp23	90	70.270	ENSMMUG00000020284	UTP23	84	68.269	Macaca_mulatta
ENSXETG00000020781	utp23	90	69.820	ENSMNEG00000028668	UTP23	84	67.788	Macaca_nemestrina
ENSXETG00000020781	utp23	90	69.820	ENSMLEG00000032668	UTP23	78	68.269	Mandrillus_leucophaeus
ENSXETG00000020781	utp23	94	63.248	ENSMAMG00000003259	utp23	83	62.679	Mastacembelus_armatus
ENSXETG00000020781	utp23	90	63.393	ENSMZEG00005026398	utp23	82	62.201	Maylandia_zebra
ENSXETG00000020781	utp23	89	70.000	ENSMGAG00000012472	UTP23	84	71.014	Meleagris_gallopavo
ENSXETG00000020781	utp23	90	69.369	ENSMICG00000034720	UTP23	84	69.231	Microcebus_murinus
ENSXETG00000020781	utp23	90	56.000	ENSMMOG00000014498	utp23	84	59.809	Mola_mola
ENSXETG00000020781	utp23	87	71.028	ENSMODG00000004140	UTP23	83	69.231	Monodelphis_domestica
ENSXETG00000020781	utp23	98	60.246	ENSMALG00000010867	utp23	85	61.722	Monopterus_albus
ENSXETG00000020781	utp23	90	67.117	MGP_CAROLIEiJ_G0019781	Utp23	84	65.385	Mus_caroli
ENSXETG00000020781	utp23	90	66.816	ENSMUSG00000022313	Utp23	84	67.464	Mus_musculus
ENSXETG00000020781	utp23	90	66.368	MGP_SPRETEiJ_G0020678	Utp23	81	66.986	Mus_spretus
ENSXETG00000020781	utp23	91	68.444	ENSMPUG00000000987	UTP23	84	67.788	Mustela_putorius_furo
ENSXETG00000020781	utp23	90	69.369	ENSMLUG00000004345	UTP23	84	68.269	Myotis_lucifugus
ENSXETG00000020781	utp23	90	63.839	ENSNBRG00000012946	utp23	82	62.679	Neolamprologus_brichardi
ENSXETG00000020781	utp23	90	70.270	ENSNLEG00000032995	UTP23	77	68.750	Nomascus_leucogenys
ENSXETG00000020781	utp23	87	70.093	ENSMEUG00000001566	UTP23	89	68.269	Notamacropus_eugenii
ENSXETG00000020781	utp23	91	67.411	ENSOPRG00000011227	UTP23	84	66.346	Ochotona_princeps
ENSXETG00000020781	utp23	94	65.665	ENSODEG00000018881	-	83	66.827	Octodon_degus
ENSXETG00000020781	utp23	71	55.682	ENSONIG00000013525	utp23	80	59.006	Oreochromis_niloticus
ENSXETG00000020781	utp23	91	56.828	ENSOANG00000004878	UTP23	81	59.184	Ornithorhynchus_anatinus
ENSXETG00000020781	utp23	87	70.093	ENSOCUG00000007541	UTP23	84	68.269	Oryctolagus_cuniculus
ENSXETG00000020781	utp23	99	60.484	ENSORLG00000001784	utp23	82	61.244	Oryzias_latipes
ENSXETG00000020781	utp23	99	59.109	ENSORLG00020009731	utp23	82	61.722	Oryzias_latipes_hni
ENSXETG00000020781	utp23	96	59.244	ENSORLG00015016970	utp23	82	61.244	Oryzias_latipes_hsok
ENSXETG00000020781	utp23	90	62.946	ENSOMEG00000008767	utp23	82	62.201	Oryzias_melastigma
ENSXETG00000020781	utp23	51	58.268	ENSOGAG00000033060	-	72	59.804	Otolemur_garnettii
ENSXETG00000020781	utp23	87	70.093	ENSOGAG00000017024	UTP23	84	67.788	Otolemur_garnettii
ENSXETG00000020781	utp23	90	69.369	ENSOARG00000010483	UTP23	84	68.269	Ovis_aries
ENSXETG00000020781	utp23	90	69.369	ENSPPAG00000028660	UTP23	84	67.788	Pan_paniscus
ENSXETG00000020781	utp23	90	69.369	ENSPPRG00000024902	UTP23	84	70.192	Panthera_pardus
ENSXETG00000020781	utp23	90	69.369	ENSPTIG00000019925	UTP23	84	70.192	Panthera_tigris_altaica
ENSXETG00000020781	utp23	90	70.270	ENSPTRG00000020521	UTP23	77	68.750	Pan_troglodytes
ENSXETG00000020781	utp23	90	69.369	ENSPANG00000011559	UTP23	84	67.308	Papio_anubis
ENSXETG00000020781	utp23	51	31.783	ENSPKIG00000003415	fcf1	63	31.783	Paramormyrops_kingsleyae
ENSXETG00000020781	utp23	94	61.966	ENSPKIG00000018790	utp23	88	62.679	Paramormyrops_kingsleyae
ENSXETG00000020781	utp23	90	72.973	ENSPSIG00000013132	UTP23	83	74.879	Pelodiscus_sinensis
ENSXETG00000020781	utp23	91	56.444	ENSPMGG00000019770	utp23	83	57.488	Periophthalmus_magnuspinnatus
ENSXETG00000020781	utp23	51	32.031	ENSPMAG00000000522	fcf1	62	32.031	Petromyzon_marinus
ENSXETG00000020781	utp23	87	69.159	ENSPCIG00000018598	UTP23	81	68.750	Phascolarctos_cinereus
ENSXETG00000020781	utp23	87	60.092	ENSPFOG00000003590	utp23	82	59.809	Poecilia_formosa
ENSXETG00000020781	utp23	87	60.092	ENSPLAG00000017925	utp23	82	59.809	Poecilia_latipinna
ENSXETG00000020781	utp23	87	60.092	ENSPMEG00000006728	utp23	82	59.809	Poecilia_mexicana
ENSXETG00000020781	utp23	84	58.373	ENSPREG00000002478	utp23	82	58.852	Poecilia_reticulata
ENSXETG00000020781	utp23	90	70.270	ENSPPYG00000018831	UTP23	84	68.269	Pongo_abelii
ENSXETG00000020781	utp23	90	66.816	ENSPCAG00000009093	UTP23	84	66.827	Procavia_capensis
ENSXETG00000020781	utp23	90	69.231	ENSPVAG00000002661	UTP23	83	69.565	Pteropus_vampyrus
ENSXETG00000020781	utp23	90	62.946	ENSPNYG00000017636	utp23	82	61.722	Pundamilia_nyererei
ENSXETG00000020781	utp23	51	30.469	ENSPNAG00000010076	fcf1	63	30.469	Pygocentrus_nattereri
ENSXETG00000020781	utp23	84	62.019	ENSPNAG00000024538	utp23	86	62.201	Pygocentrus_nattereri
ENSXETG00000020781	utp23	90	68.018	ENSRNOG00000004387	Utp23	84	66.827	Rattus_norvegicus
ENSXETG00000020781	utp23	90	69.820	ENSRBIG00000026267	UTP23	84	68.750	Rhinopithecus_bieti
ENSXETG00000020781	utp23	90	69.820	ENSRROG00000028593	UTP23	84	68.750	Rhinopithecus_roxellana
ENSXETG00000020781	utp23	82	31.579	YOR004W	-	81	30.144	Saccharomyces_cerevisiae
ENSXETG00000020781	utp23	90	69.820	ENSSBOG00000018914	UTP23	84	67.788	Saimiri_boliviensis_boliviensis
ENSXETG00000020781	utp23	62	67.320	ENSSHAG00000015399	UTP23	75	66.667	Sarcophilus_harrisii
ENSXETG00000020781	utp23	86	64.019	ENSSFOG00015009226	utp23	91	63.158	Scleropages_formosus
ENSXETG00000020781	utp23	96	55.649	ENSSMAG00000020390	utp23	82	62.679	Scophthalmus_maximus
ENSXETG00000020781	utp23	94	63.248	ENSSDUG00000020272	utp23	87	63.158	Seriola_dumerili
ENSXETG00000020781	utp23	94	63.248	ENSSLDG00000000393	utp23	87	63.158	Seriola_lalandi_dorsalis
ENSXETG00000020781	utp23	99	70.902	ENSSPUG00000011572	UTP23	84	75.845	Sphenodon_punctatus
ENSXETG00000020781	utp23	84	59.809	ENSSPAG00000013890	utp23	84	60.287	Stegastes_partitus
ENSXETG00000020781	utp23	51	30.469	ENSSPAG00000009082	fcf1	67	30.469	Stegastes_partitus
ENSXETG00000020781	utp23	87	70.561	ENSSSCG00000030493	UTP23	83	67.308	Sus_scrofa
ENSXETG00000020781	utp23	89	68.468	ENSTGUG00000015403	-	88	69.082	Taeniopygia_guttata
ENSXETG00000020781	utp23	89	69.820	ENSTGUG00000012316	-	83	70.531	Taeniopygia_guttata
ENSXETG00000020781	utp23	97	54.959	ENSTRUG00000023365	utp23	82	60.287	Takifugu_rubripes
ENSXETG00000020781	utp23	83	68.627	ENSTBEG00000008655	UTP23	83	66.667	Tupaia_belangeri
ENSXETG00000020781	utp23	90	68.468	ENSTTRG00000015295	UTP23	84	68.269	Tursiops_truncatus
ENSXETG00000020781	utp23	90	68.919	ENSUMAG00000020439	UTP23	84	69.712	Ursus_maritimus
ENSXETG00000020781	utp23	90	68.919	ENSVPAG00000009358	UTP23	84	67.308	Vicugna_pacos
ENSXETG00000020781	utp23	90	69.369	ENSVVUG00000015307	UTP23	84	69.231	Vulpes_vulpes
ENSXETG00000020781	utp23	84	63.636	ENSXCOG00000019504	utp23	82	61.244	Xiphophorus_couchianus
ENSXETG00000020781	utp23	51	30.469	ENSXMAG00000014576	fcf1	63	30.469	Xiphophorus_maculatus
ENSXETG00000020781	utp23	84	63.636	ENSXMAG00000014058	utp23	82	61.244	Xiphophorus_maculatus