EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000020912 (Gene tree)
Gene ID: -
Gene Symbol: atxn2
Alias: -
Full Name: ataxin 2
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 35821 bases
Position: chrGL172947.1:42555-78375
Accession: XB-GENE-920190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000045191	LsmAD	PF06741.13	4.2e-16	1	1
ENSXETP00000045191	SM-ATX	PF14438.6	8.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000045191	-	3177	-	ENSXETP00000045191	1058 (aa)	-	F6QZL7

Gene Model

Click here to download ENSXETG00000020912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000020912's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000020912	atxn2	99	33.456	ENSXETG00000014990	atxn2l	93	53.465

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000020912	atxn2	100	77.570	ENSG00000204842	ATXN2	100	94.118	Homo_sapiens
ENSXETG00000020912	atxn2	99	49.501	ENSAPOG00000014663	atxn2	95	69.103	Acanthochromis_polyacanthus
ENSXETG00000020912	atxn2	100	78.037	ENSAMEG00000013747	ATXN2	99	77.757	Ailuropoda_melanoleuca
ENSXETG00000020912	atxn2	98	55.432	ENSACIG00000004928	atxn2	99	54.871	Amphilophus_citrinellus
ENSXETG00000020912	atxn2	99	49.728	ENSAOCG00000001107	atxn2	95	67.647	Amphiprion_ocellaris
ENSXETG00000020912	atxn2	99	49.548	ENSAPEG00000020250	atxn2	94	68.771	Amphiprion_percula
ENSXETG00000020912	atxn2	98	54.405	ENSATEG00000018587	atxn2	99	56.166	Anabas_testudineus
ENSXETG00000020912	atxn2	100	79.475	ENSAPLG00000008724	ATXN2	99	79.475	Anas_platyrhynchos
ENSXETG00000020912	atxn2	100	72.744	ENSACAG00000002419	ATXN2	99	73.209	Anolis_carolinensis
ENSXETG00000020912	atxn2	100	77.757	ENSANAG00000022522	ATXN2	99	75.322	Aotus_nancymaae
ENSXETG00000020912	atxn2	98	55.948	ENSACLG00000013359	atxn2	97	56.134	Astatotilapia_calliptera
ENSXETG00000020912	atxn2	94	67.208	ENSAMXG00000002342	atxn2	95	67.550	Astyanax_mexicanus
ENSXETG00000020912	atxn2	100	77.290	ENSBTAG00000022069	ATXN2	99	77.191	Bos_taurus
ENSXETG00000020912	atxn2	99	77.486	ENSCJAG00000011756	ATXN2	99	75.047	Callithrix_jacchus
ENSXETG00000020912	atxn2	100	77.031	ENSCAFG00000008606	ATXN2	81	76.564	Canis_familiaris
ENSXETG00000020912	atxn2	99	77.380	ENSCAFG00020017041	ATXN2	99	77.097	Canis_lupus_dingo
ENSXETG00000020912	atxn2	100	77.196	ENSCHIG00000012141	ATXN2	81	77.103	Capra_hircus
ENSXETG00000020912	atxn2	100	77.757	ENSTSYG00000002717	ATXN2	99	75.671	Carlito_syrichta
ENSXETG00000020912	atxn2	81	71.263	ENSCAPG00000013332	ATXN2	99	71.029	Cavia_aperea
ENSXETG00000020912	atxn2	100	78.411	ENSCPOG00000001390	ATXN2	96	75.679	Cavia_porcellus
ENSXETG00000020912	atxn2	100	77.757	ENSCCAG00000026267	ATXN2	99	75.322	Cebus_capucinus
ENSXETG00000020912	atxn2	100	77.383	ENSCATG00000017877	ATXN2	99	74.480	Cercocebus_atys
ENSXETG00000020912	atxn2	100	78.224	ENSCLAG00000009324	ATXN2	97	77.290	Chinchilla_lanigera
ENSXETG00000020912	atxn2	100	77.570	ENSCSAG00000002590	ATXN2	92	77.103	Chlorocebus_sabaeus
ENSXETG00000020912	atxn2	78	70.968	ENSCHOG00000004284	ATXN2	82	70.968	Choloepus_hoffmanni
ENSXETG00000020912	atxn2	100	77.290	ENSCANG00000042302	ATXN2	99	76.822	Colobus_angolensis_palliatus
ENSXETG00000020912	atxn2	100	74.299	ENSCGRG00001022603	Atxn2	82	73.576	Cricetulus_griseus_chok1gshd
ENSXETG00000020912	atxn2	100	76.729	ENSCGRG00000015823	Atxn2	97	76.004	Cricetulus_griseus_crigri
ENSXETG00000020912	atxn2	98	59.207	ENSCSEG00000009072	-	95	63.399	Cynoglossus_semilaevis
ENSXETG00000020912	atxn2	99	56.375	ENSCVAG00000020160	atxn2	95	55.373	Cyprinodon_variegatus
ENSXETG00000020912	atxn2	100	59.182	ENSDARG00000052897	atxn2	95	59.199	Danio_rerio
ENSXETG00000020912	atxn2	100	77.383	ENSDNOG00000015696	ATXN2	99	76.881	Dasypus_novemcinctus
ENSXETG00000020912	atxn2	100	71.442	ENSDORG00000000808	Atxn2	99	71.348	Dipodomys_ordii
ENSXETG00000020912	atxn2	94	79.920	ENSETEG00000005224	ATXN2	76	79.920	Echinops_telfairi
ENSXETG00000020912	atxn2	100	77.664	ENSEASG00005012077	ATXN2	99	77.116	Equus_asinus_asinus
ENSXETG00000020912	atxn2	100	77.664	ENSECAG00000014347	ATXN2	79	76.959	Equus_caballus
ENSXETG00000020912	atxn2	71	77.741	ENSEEUG00000014635	-	70	77.741	Erinaceus_europaeus
ENSXETG00000020912	atxn2	98	60.114	ENSELUG00000019632	atxn2	95	64.052	Esox_lucius
ENSXETG00000020912	atxn2	100	77.850	ENSFCAG00000003178	ATXN2	99	75.331	Felis_catus
ENSXETG00000020912	atxn2	99	76.894	ENSFALG00000009001	ATXN2	99	76.894	Ficedula_albicollis
ENSXETG00000020912	atxn2	100	77.477	ENSFDAG00000020942	ATXN2	99	77.196	Fukomys_damarensis
ENSXETG00000020912	atxn2	90	65.455	ENSFHEG00000019561	atxn2	93	67.647	Fundulus_heteroclitus
ENSXETG00000020912	atxn2	94	60.297	ENSGMOG00000007412	atxn2	93	57.331	Gadus_morhua
ENSXETG00000020912	atxn2	98	74.953	ENSGALG00000004625	ATXN2	98	74.953	Gallus_gallus
ENSXETG00000020912	atxn2	99	56.164	ENSGAFG00000003302	atxn2	95	54.751	Gambusia_affinis
ENSXETG00000020912	atxn2	100	57.052	ENSGACG00000006295	atxn2	99	56.923	Gasterosteus_aculeatus
ENSXETG00000020912	atxn2	99	77.851	ENSGGOG00000002137	ATXN2	99	76.814	Gorilla_gorilla
ENSXETG00000020912	atxn2	99	44.334	ENSHBUG00000002921	atxn2	95	68.771	Haplochromis_burtoni
ENSXETG00000020912	atxn2	100	75.843	ENSHGLG00000009812	ATXN2	83	75.749	Heterocephalus_glaber_female
ENSXETG00000020912	atxn2	100	77.757	ENSHGLG00100019351	ATXN2	99	77.664	Heterocephalus_glaber_male
ENSXETG00000020912	atxn2	96	64.157	ENSHCOG00000005278	atxn2	92	65.916	Hippocampus_comes
ENSXETG00000020912	atxn2	100	77.757	ENSSTOG00000000978	ATXN2	99	74.496	Ictidomys_tridecemlineatus
ENSXETG00000020912	atxn2	56	50.161	ENSLBEG00000017484	atxn2	95	49.447	Labrus_bergylta
ENSXETG00000020912	atxn2	100	69.231	ENSLACG00000012531	ATXN2	99	69.972	Latimeria_chalumnae
ENSXETG00000020912	atxn2	95	70.513	ENSLOCG00000007880	atxn2	96	63.889	Lepisosteus_oculatus
ENSXETG00000020912	atxn2	100	78.451	ENSLAFG00000007416	ATXN2	99	77.425	Loxodonta_africana
ENSXETG00000020912	atxn2	100	77.290	ENSMFAG00000000374	ATXN2	99	74.862	Macaca_fascicularis
ENSXETG00000020912	atxn2	99	77.286	ENSMMUG00000002226	ATXN2	99	76.814	Macaca_mulatta
ENSXETG00000020912	atxn2	100	77.290	ENSMNEG00000035588	ATXN2	99	74.862	Macaca_nemestrina
ENSXETG00000020912	atxn2	100	77.290	ENSMLEG00000024324	ATXN2	99	76.822	Mandrillus_leucophaeus
ENSXETG00000020912	atxn2	99	48.364	ENSMAMG00000019160	atxn2	94	67.774	Mastacembelus_armatus
ENSXETG00000020912	atxn2	99	46.056	ENSMZEG00005008476	atxn2	95	68.771	Maylandia_zebra
ENSXETG00000020912	atxn2	100	78.765	ENSMGAG00000005288	ATXN2	99	78.765	Meleagris_gallopavo
ENSXETG00000020912	atxn2	63	74.118	ENSMAUG00000008223	-	99	72.834	Mesocricetus_auratus
ENSXETG00000020912	atxn2	99	78.322	ENSMICG00000013541	ATXN2	99	77.380	Microcebus_murinus
ENSXETG00000020912	atxn2	86	74.050	ENSMOCG00000005219	Atxn2	99	71.659	Microtus_ochrogaster
ENSXETG00000020912	atxn2	98	54.578	ENSMMOG00000013189	atxn2	99	55.306	Mola_mola
ENSXETG00000020912	atxn2	100	77.965	ENSMODG00000012221	ATXN2	83	77.031	Monodelphis_domestica
ENSXETG00000020912	atxn2	99	49.361	ENSMALG00000018529	atxn2	94	67.442	Monopterus_albus
ENSXETG00000020912	atxn2	100	77.167	MGP_CAROLIEiJ_G0027692	Atxn2	93	76.279	Mus_caroli
ENSXETG00000020912	atxn2	100	77.404	ENSMUSG00000042605	Atxn2	99	73.676	Mus_musculus
ENSXETG00000020912	atxn2	100	67.409	MGP_PahariEiJ_G0024272	Atxn2	99	72.500	Mus_pahari
ENSXETG00000020912	atxn2	100	77.239	MGP_SPRETEiJ_G0028690	Atxn2	99	73.538	Mus_spretus
ENSXETG00000020912	atxn2	100	75.701	ENSMPUG00000002212	ATXN2	99	75.701	Mustela_putorius_furo
ENSXETG00000020912	atxn2	100	76.465	ENSMLUG00000015559	ATXN2	98	76.093	Myotis_lucifugus
ENSXETG00000020912	atxn2	98	58.071	ENSNBRG00000015794	atxn2	99	56.865	Neolamprologus_brichardi
ENSXETG00000020912	atxn2	100	77.383	ENSNLEG00000000484	ATXN2	99	74.954	Nomascus_leucogenys
ENSXETG00000020912	atxn2	85	90.909	ENSMEUG00000012244	-	85	90.909	Notamacropus_eugenii
ENSXETG00000020912	atxn2	100	73.669	ENSOPRG00000014599	ATXN2	99	73.016	Ochotona_princeps
ENSXETG00000020912	atxn2	99	77.778	ENSODEG00000010798	ATXN2	99	76.648	Octodon_degus
ENSXETG00000020912	atxn2	99	57.856	ENSONIG00000014521	atxn2	97	56.924	Oreochromis_niloticus
ENSXETG00000020912	atxn2	87	79.957	ENSOANG00000004796	ATXN2	99	78.664	Ornithorhynchus_anatinus
ENSXETG00000020912	atxn2	100	75.724	ENSOCUG00000002855	ATXN2	69	75.163	Oryctolagus_cuniculus
ENSXETG00000020912	atxn2	92	62.335	ENSORLG00000003606	atxn2	96	49.588	Oryzias_latipes
ENSXETG00000020912	atxn2	99	47.953	ENSORLG00020000785	atxn2	95	66.340	Oryzias_latipes_hni
ENSXETG00000020912	atxn2	99	47.905	ENSORLG00015012345	atxn2	95	66.340	Oryzias_latipes_hsok
ENSXETG00000020912	atxn2	100	77.850	ENSOGAG00000000609	ATXN2	82	76.916	Otolemur_garnettii
ENSXETG00000020912	atxn2	100	77.383	ENSOARG00000018223	ATXN2	98	77.477	Ovis_aries
ENSXETG00000020912	atxn2	100	77.290	ENSPPAG00000028043	ATXN2	99	76.814	Pan_paniscus
ENSXETG00000020912	atxn2	100	77.944	ENSPPRG00000003573	ATXN2	99	75.425	Panthera_pardus
ENSXETG00000020912	atxn2	100	77.850	ENSPTIG00000021122	ATXN2	99	77.757	Panthera_tigris_altaica
ENSXETG00000020912	atxn2	100	77.383	ENSPTRG00000029540	ATXN2	99	76.909	Pan_troglodytes
ENSXETG00000020912	atxn2	100	77.290	ENSPANG00000017168	ATXN2	99	74.862	Papio_anubis
ENSXETG00000020912	atxn2	100	60.111	ENSPKIG00000023134	atxn2	96	59.184	Paramormyrops_kingsleyae
ENSXETG00000020912	atxn2	100	77.757	ENSPSIG00000002353	-	99	78.131	Pelodiscus_sinensis
ENSXETG00000020912	atxn2	99	54.219	ENSPMGG00000005074	atxn2	99	54.529	Periophthalmus_magnuspinnatus
ENSXETG00000020912	atxn2	86	75.570	ENSPEMG00000015340	Atxn2	99	73.235	Peromyscus_maniculatus_bairdii
ENSXETG00000020912	atxn2	74	53.135	ENSPMAG00000007157	atxn2	71	53.135	Petromyzon_marinus
ENSXETG00000020912	atxn2	99	34.208	ENSPMAG00000004603	atxn2	92	50.741	Petromyzon_marinus
ENSXETG00000020912	atxn2	62	73.756	ENSPCIG00000006165	-	99	71.589	Phascolarctos_cinereus
ENSXETG00000020912	atxn2	91	64.136	ENSPFOG00000005857	atxn2	95	51.449	Poecilia_formosa
ENSXETG00000020912	atxn2	96	66.154	ENSPMEG00000016681	atxn2	95	68.439	Poecilia_mexicana
ENSXETG00000020912	atxn2	99	58.009	ENSPREG00000014825	atxn2	99	57.766	Poecilia_reticulata
ENSXETG00000020912	atxn2	100	77.570	ENSPPYG00000004963	ATXN2	85	77.103	Pongo_abelii
ENSXETG00000020912	atxn2	60	100.000	ENSPCAG00000004216	-	54	100.000	Procavia_capensis
ENSXETG00000020912	atxn2	99	77.062	ENSPCOG00000022031	ATXN2	99	76.540	Propithecus_coquereli
ENSXETG00000020912	atxn2	100	70.841	ENSPVAG00000013179	ATXN2	81	70.374	Pteropus_vampyrus
ENSXETG00000020912	atxn2	57	47.819	ENSPNYG00000016981	atxn2	98	47.658	Pundamilia_nyererei
ENSXETG00000020912	atxn2	100	45.446	ENSPNAG00000010889	atxn2	95	67.881	Pygocentrus_nattereri
ENSXETG00000020912	atxn2	100	77.124	ENSRNOG00000001256	Atxn2	97	76.564	Rattus_norvegicus
ENSXETG00000020912	atxn2	100	75.491	ENSRBIG00000039212	ATXN2	99	75.210	Rhinopithecus_bieti
ENSXETG00000020912	atxn2	100	77.383	ENSRROG00000031170	ATXN2	99	74.954	Rhinopithecus_roxellana
ENSXETG00000020912	atxn2	99	75.875	ENSSBOG00000031563	ATXN2	99	75.414	Saimiri_boliviensis_boliviensis
ENSXETG00000020912	atxn2	100	78.265	ENSSHAG00000007304	ATXN2	98	77.146	Sarcophilus_harrisii
ENSXETG00000020912	atxn2	99	57.556	ENSSFOG00015017229	atxn2	99	57.183	Scleropages_formosus
ENSXETG00000020912	atxn2	98	56.534	ENSSMAG00000004627	atxn2	95	67.320	Scophthalmus_maximus
ENSXETG00000020912	atxn2	99	49.185	ENSSDUG00000001223	atxn2	93	68.771	Seriola_dumerili
ENSXETG00000020912	atxn2	98	55.710	ENSSLDG00000019837	atxn2	99	55.617	Seriola_lalandi_dorsalis
ENSXETG00000020912	atxn2	78	83.538	ENSSARG00000006291	ATXN2	78	83.538	Sorex_araneus
ENSXETG00000020912	atxn2	100	78.087	ENSSPUG00000010317	ATXN2	92	77.509	Sphenodon_punctatus
ENSXETG00000020912	atxn2	98	55.626	ENSSPAG00000000377	atxn2	94	69.103	Stegastes_partitus
ENSXETG00000020912	atxn2	100	77.009	ENSSSCG00000009834	ATXN2	93	77.103	Sus_scrofa
ENSXETG00000020912	atxn2	99	54.692	ENSTRUG00000016801	atxn2	95	67.101	Takifugu_rubripes
ENSXETG00000020912	atxn2	86	83.051	ENSTBEG00000001985	ATXN2	86	83.051	Tupaia_belangeri
ENSXETG00000020912	atxn2	90	83.784	ENSTTRG00000000952	ATXN2	75	83.784	Tursiops_truncatus
ENSXETG00000020912	atxn2	100	77.850	ENSUAMG00000025295	ATXN2	92	77.570	Ursus_americanus
ENSXETG00000020912	atxn2	99	77.663	ENSUMAG00000007315	ATXN2	99	77.380	Ursus_maritimus
ENSXETG00000020912	atxn2	91	87.903	ENSVPAG00000005940	ATXN2	97	72.286	Vicugna_pacos
ENSXETG00000020912	atxn2	99	77.568	ENSVVUG00000016107	ATXN2	99	77.286	Vulpes_vulpes
ENSXETG00000020912	atxn2	56	49.442	ENSXCOG00000010001	atxn2	99	50.080	Xiphophorus_couchianus