EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000021399 (Gene tree)
Gene ID: -
Gene Symbol: cstf3
Alias: -
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 3
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 19456 bases
Position: chrGL172641.1:3278320-3297775
Accession: XB-GENE-980297
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000049103	Suf	PF05843.14	7.1e-53	1	2
ENSXETP00000049103	Suf	PF05843.14	7.1e-53	2	2
ENSXETP00000046269	Suf	PF05843.14	1.4e-51	1	2
ENSXETP00000046269	Suf	PF05843.14	1.4e-51	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000049103	-	1893	-	ENSXETP00000049103	631 (aa)	-	F7DEE7
ENSXETT00000046269	-	1848	-	ENSXETP00000046269	616 (aa)	-	F6YEW8

Gene Model

Click here to download ENSXETG00000021399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000021399's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000021399	cstf3	100	80.583	ENSG00000176102	CSTF3	88	79.375	Homo_sapiens
ENSXETG00000021399	cstf3	100	76.699	ENSAPOG00000014054	cstf3	88	75.625	Acanthochromis_polyacanthus
ENSXETG00000021399	cstf3	100	80.744	ENSAMEG00000007187	CSTF3	88	79.531	Ailuropoda_melanoleuca
ENSXETG00000021399	cstf3	99	73.071	ENSACIG00000005539	cstf3	97	73.071	Amphilophus_citrinellus
ENSXETG00000021399	cstf3	100	76.861	ENSAOCG00000010930	cstf3	88	75.781	Amphiprion_ocellaris
ENSXETG00000021399	cstf3	100	76.861	ENSAPEG00000007903	cstf3	88	75.781	Amphiprion_percula
ENSXETG00000021399	cstf3	100	77.184	ENSATEG00000000190	cstf3	88	76.094	Anabas_testudineus
ENSXETG00000021399	cstf3	100	81.068	ENSAPLG00000007217	CSTF3	89	79.844	Anas_platyrhynchos
ENSXETG00000021399	cstf3	100	80.744	ENSACAG00000002823	CSTF3	88	79.688	Anolis_carolinensis
ENSXETG00000021399	cstf3	100	80.583	ENSANAG00000020699	CSTF3	97	80.488	Aotus_nancymaae
ENSXETG00000021399	cstf3	100	77.023	ENSACLG00000007820	cstf3	88	75.938	Astatotilapia_calliptera
ENSXETG00000021399	cstf3	99	77.561	ENSAMXG00000014198	cstf3	88	75.938	Astyanax_mexicanus
ENSXETG00000021399	cstf3	100	80.583	ENSBTAG00000008617	CSTF3	94	79.375	Bos_taurus
ENSXETG00000021399	cstf3	99	43.101	WBGene00006307	suf-1	87	42.567	Caenorhabditis_elegans
ENSXETG00000021399	cstf3	100	80.583	ENSCJAG00000005533	CSTF3	97	80.488	Callithrix_jacchus
ENSXETG00000021399	cstf3	100	80.583	ENSCAFG00000007264	CSTF3	88	79.375	Canis_familiaris
ENSXETG00000021399	cstf3	100	80.583	ENSCAFG00020002715	CSTF3	87	80.449	Canis_lupus_dingo
ENSXETG00000021399	cstf3	100	80.583	ENSCHIG00000016418	CSTF3	97	80.488	Capra_hircus
ENSXETG00000021399	cstf3	100	80.583	ENSTSYG00000000451	CSTF3	97	80.488	Carlito_syrichta
ENSXETG00000021399	cstf3	89	79.245	ENSCAPG00000010958	CSTF3	92	79.245	Cavia_aperea
ENSXETG00000021399	cstf3	100	80.583	ENSCPOG00000005545	CSTF3	89	79.375	Cavia_porcellus
ENSXETG00000021399	cstf3	100	80.583	ENSCCAG00000024790	CSTF3	97	80.488	Cebus_capucinus
ENSXETG00000021399	cstf3	100	80.583	ENSCATG00000007080	CSTF3	97	80.488	Cercocebus_atys
ENSXETG00000021399	cstf3	100	80.583	ENSCLAG00000016179	CSTF3	88	79.375	Chinchilla_lanigera
ENSXETG00000021399	cstf3	73	86.640	ENSCHOG00000002497	CSTF3	64	86.640	Choloepus_hoffmanni
ENSXETG00000021399	cstf3	100	80.906	ENSCPBG00000006753	CSTF3	88	79.688	Chrysemys_picta_bellii
ENSXETG00000021399	cstf3	99	54.207	ENSCING00000006401	-	87	53.042	Ciona_intestinalis
ENSXETG00000021399	cstf3	99	54.254	ENSCSAVG00000004851	-	89	53.488	Ciona_savignyi
ENSXETG00000021399	cstf3	100	80.583	ENSCANG00000035468	CSTF3	97	80.488	Colobus_angolensis_palliatus
ENSXETG00000021399	cstf3	100	80.259	ENSCGRG00001014773	Cstf3	88	79.062	Cricetulus_griseus_chok1gshd
ENSXETG00000021399	cstf3	100	80.259	ENSCGRG00000004142	Cstf3	88	79.062	Cricetulus_griseus_crigri
ENSXETG00000021399	cstf3	100	76.214	ENSCSEG00000014283	cstf3	88	75.000	Cynoglossus_semilaevis
ENSXETG00000021399	cstf3	100	75.890	ENSCVAG00000019739	cstf3	88	75.000	Cyprinodon_variegatus
ENSXETG00000021399	cstf3	100	77.670	ENSDARG00000018904	cstf3	88	76.406	Danio_rerio
ENSXETG00000021399	cstf3	100	80.583	ENSDNOG00000007366	CSTF3	88	79.375	Dasypus_novemcinctus
ENSXETG00000021399	cstf3	99	73.744	ENSDORG00000005898	Cstf3	88	72.188	Dipodomys_ordii
ENSXETG00000021399	cstf3	92	53.299	FBgn0003559	su(f)	80	52.349	Drosophila_melanogaster
ENSXETG00000021399	cstf3	94	79.623	ENSETEG00000017097	CSTF3	81	79.592	Echinops_telfairi
ENSXETG00000021399	cstf3	89	64.727	ENSEBUG00000015459	cstf3	88	64.758	Eptatretus_burgeri
ENSXETG00000021399	cstf3	100	80.744	ENSEASG00005019884	CSTF3	90	79.375	Equus_asinus_asinus
ENSXETG00000021399	cstf3	100	80.744	ENSECAG00000023338	CSTF3	90	79.375	Equus_caballus
ENSXETG00000021399	cstf3	100	74.434	ENSEEUG00000015167	CSTF3	88	73.438	Erinaceus_europaeus
ENSXETG00000021399	cstf3	100	74.757	ENSELUG00000023393	cstf3	88	73.438	Esox_lucius
ENSXETG00000021399	cstf3	100	80.583	ENSFCAG00000030711	CSTF3	88	79.375	Felis_catus
ENSXETG00000021399	cstf3	100	80.906	ENSFALG00000010764	CSTF3	97	79.812	Ficedula_albicollis
ENSXETG00000021399	cstf3	100	80.583	ENSFDAG00000012082	CSTF3	88	79.375	Fukomys_damarensis
ENSXETG00000021399	cstf3	100	76.052	ENSFHEG00000020623	cstf3	88	75.000	Fundulus_heteroclitus
ENSXETG00000021399	cstf3	100	74.798	ENSGMOG00000012275	cstf3	88	73.791	Gadus_morhua
ENSXETG00000021399	cstf3	100	81.068	ENSGALG00000011685	CSTF3	88	79.844	Gallus_gallus
ENSXETG00000021399	cstf3	100	76.375	ENSGAFG00000002181	cstf3	88	75.312	Gambusia_affinis
ENSXETG00000021399	cstf3	100	76.214	ENSGACG00000015997	cstf3	88	75.312	Gasterosteus_aculeatus
ENSXETG00000021399	cstf3	100	81.068	ENSGAGG00000006200	CSTF3	88	79.844	Gopherus_agassizii
ENSXETG00000021399	cstf3	100	75.484	ENSGGOG00000026591	CSTF3	87	75.563	Gorilla_gorilla
ENSXETG00000021399	cstf3	100	76.861	ENSHBUG00000016656	cstf3	88	75.781	Haplochromis_burtoni
ENSXETG00000021399	cstf3	100	80.583	ENSHGLG00000017834	CSTF3	88	79.375	Heterocephalus_glaber_female
ENSXETG00000021399	cstf3	100	80.583	ENSHGLG00100018042	CSTF3	89	79.375	Heterocephalus_glaber_male
ENSXETG00000021399	cstf3	99	76.013	ENSHCOG00000015218	cstf3	88	74.219	Hippocampus_comes
ENSXETG00000021399	cstf3	100	77.023	ENSIPUG00000013170	CSTF3	89	75.781	Ictalurus_punctatus
ENSXETG00000021399	cstf3	100	80.583	ENSSTOG00000013306	CSTF3	88	79.375	Ictidomys_tridecemlineatus
ENSXETG00000021399	cstf3	89	80.645	ENSJJAG00000018430	Cstf3	83	80.645	Jaculus_jaculus
ENSXETG00000021399	cstf3	100	76.537	ENSKMAG00000010916	cstf3	88	75.312	Kryptolebias_marmoratus
ENSXETG00000021399	cstf3	100	75.890	ENSLBEG00000002306	cstf3	88	74.844	Labrus_bergylta
ENSXETG00000021399	cstf3	100	77.994	ENSLACG00000017296	CSTF3	88	77.031	Latimeria_chalumnae
ENSXETG00000021399	cstf3	100	77.670	ENSLOCG00000004415	cstf3	88	76.562	Lepisosteus_oculatus
ENSXETG00000021399	cstf3	100	80.583	ENSLAFG00000008712	CSTF3	88	79.375	Loxodonta_africana
ENSXETG00000021399	cstf3	100	80.583	ENSMFAG00000029516	CSTF3	97	80.488	Macaca_fascicularis
ENSXETG00000021399	cstf3	100	80.583	ENSMMUG00000002542	CSTF3	88	79.375	Macaca_mulatta
ENSXETG00000021399	cstf3	100	80.583	ENSMNEG00000021807	CSTF3	97	80.488	Macaca_nemestrina
ENSXETG00000021399	cstf3	100	80.583	ENSMLEG00000039594	CSTF3	97	80.488	Mandrillus_leucophaeus
ENSXETG00000021399	cstf3	100	76.861	ENSMAMG00000020423	cstf3	88	75.781	Mastacembelus_armatus
ENSXETG00000021399	cstf3	100	77.023	ENSMZEG00005012082	cstf3	88	76.153	Maylandia_zebra
ENSXETG00000021399	cstf3	100	81.068	ENSMGAG00000001383	CSTF3	89	79.471	Meleagris_gallopavo
ENSXETG00000021399	cstf3	100	80.259	ENSMAUG00000002487	Cstf3	88	79.062	Mesocricetus_auratus
ENSXETG00000021399	cstf3	100	80.906	ENSMICG00000004784	CSTF3	97	80.813	Microcebus_murinus
ENSXETG00000021399	cstf3	100	80.259	ENSMOCG00000017583	Cstf3	88	79.062	Microtus_ochrogaster
ENSXETG00000021399	cstf3	100	75.728	ENSMMOG00000016026	cstf3	84	74.688	Mola_mola
ENSXETG00000021399	cstf3	100	79.773	ENSMODG00000009745	-	88	78.594	Monodelphis_domestica
ENSXETG00000021399	cstf3	99	68.567	ENSMODG00000025205	-	87	68.139	Monodelphis_domestica
ENSXETG00000021399	cstf3	100	76.375	ENSMALG00000012050	cstf3	88	75.312	Monopterus_albus
ENSXETG00000021399	cstf3	100	80.259	MGP_CAROLIEiJ_G0024026	Cstf3	88	79.062	Mus_caroli
ENSXETG00000021399	cstf3	100	80.259	ENSMUSG00000027176	Cstf3	88	79.062	Mus_musculus
ENSXETG00000021399	cstf3	100	80.259	MGP_PahariEiJ_G0025464	Cstf3	88	79.062	Mus_pahari
ENSXETG00000021399	cstf3	100	80.259	MGP_SPRETEiJ_G0024939	Cstf3	88	79.062	Mus_spretus
ENSXETG00000021399	cstf3	100	80.744	ENSMPUG00000011457	CSTF3	88	79.531	Mustela_putorius_furo
ENSXETG00000021399	cstf3	100	78.930	ENSMLUG00000026022	-	88	77.500	Myotis_lucifugus
ENSXETG00000021399	cstf3	100	80.583	ENSMLUG00000003073	-	88	79.375	Myotis_lucifugus
ENSXETG00000021399	cstf3	100	80.583	ENSNGAG00000010677	Cstf3	89	79.375	Nannospalax_galili
ENSXETG00000021399	cstf3	99	76.923	ENSNBRG00000007345	cstf3	97	76.911	Neolamprologus_brichardi
ENSXETG00000021399	cstf3	100	80.583	ENSNLEG00000017901	CSTF3	97	80.488	Nomascus_leucogenys
ENSXETG00000021399	cstf3	83	75.775	ENSMEUG00000005640	-	98	75.723	Notamacropus_eugenii
ENSXETG00000021399	cstf3	63	77.451	ENSOPRG00000000199	-	54	77.451	Ochotona_princeps
ENSXETG00000021399	cstf3	100	80.583	ENSODEG00000016737	-	88	80.449	Octodon_degus
ENSXETG00000021399	cstf3	98	71.689	ENSODEG00000006311	-	92	72.712	Octodon_degus
ENSXETG00000021399	cstf3	100	77.023	ENSONIG00000005563	cstf3	88	75.938	Oreochromis_niloticus
ENSXETG00000021399	cstf3	100	79.743	ENSOANG00000015140	CSTF3	95	79.775	Ornithorhynchus_anatinus
ENSXETG00000021399	cstf3	100	80.583	ENSOCUG00000015417	CSTF3	88	79.375	Oryctolagus_cuniculus
ENSXETG00000021399	cstf3	100	75.890	ENSORLG00000009762	cstf3	88	74.531	Oryzias_latipes
ENSXETG00000021399	cstf3	100	75.890	ENSORLG00020005540	cstf3	88	74.531	Oryzias_latipes_hni
ENSXETG00000021399	cstf3	100	75.728	ENSORLG00015003551	cstf3	88	74.375	Oryzias_latipes_hsok
ENSXETG00000021399	cstf3	100	76.375	ENSOMEG00000003848	cstf3	90	76.329	Oryzias_melastigma
ENSXETG00000021399	cstf3	100	80.096	ENSOGAG00000010229	CSTF3	88	78.849	Otolemur_garnettii
ENSXETG00000021399	cstf3	100	80.583	ENSOARG00000017271	CSTF3	94	80.676	Ovis_aries
ENSXETG00000021399	cstf3	100	78.641	ENSPPAG00000027358	CSTF3	87	78.526	Pan_paniscus
ENSXETG00000021399	cstf3	100	80.583	ENSPPRG00000016852	CSTF3	88	79.375	Panthera_pardus
ENSXETG00000021399	cstf3	100	80.583	ENSPTIG00000008716	CSTF3	88	79.375	Panthera_tigris_altaica
ENSXETG00000021399	cstf3	100	80.583	ENSPTRG00000003485	CSTF3	88	79.375	Pan_troglodytes
ENSXETG00000021399	cstf3	100	80.583	ENSPANG00000013722	CSTF3	89	78.882	Papio_anubis
ENSXETG00000021399	cstf3	100	76.774	ENSPKIG00000023648	cstf3	88	76.094	Paramormyrops_kingsleyae
ENSXETG00000021399	cstf3	100	81.230	ENSPSIG00000009173	CSTF3	88	80.000	Pelodiscus_sinensis
ENSXETG00000021399	cstf3	75	77.730	ENSPMGG00000000164	cstf3	87	76.591	Periophthalmus_magnuspinnatus
ENSXETG00000021399	cstf3	100	80.259	ENSPEMG00000011481	Cstf3	88	79.062	Peromyscus_maniculatus_bairdii
ENSXETG00000021399	cstf3	96	70.067	ENSPMAG00000007282	cstf3	86	68.650	Petromyzon_marinus
ENSXETG00000021399	cstf3	99	80.033	ENSPCIG00000026406	-	97	80.000	Phascolarctos_cinereus
ENSXETG00000021399	cstf3	98	67.834	ENSPCIG00000030419	-	79	67.707	Phascolarctos_cinereus
ENSXETG00000021399	cstf3	100	76.537	ENSPFOG00000017239	cstf3	88	75.469	Poecilia_formosa
ENSXETG00000021399	cstf3	100	76.537	ENSPLAG00000009456	cstf3	88	75.469	Poecilia_latipinna
ENSXETG00000021399	cstf3	100	76.537	ENSPMEG00000010320	cstf3	88	75.469	Poecilia_mexicana
ENSXETG00000021399	cstf3	100	76.537	ENSPREG00000013549	cstf3	88	75.469	Poecilia_reticulata
ENSXETG00000021399	cstf3	100	80.583	ENSPPYG00000003375	CSTF3	88	79.375	Pongo_abelii
ENSXETG00000021399	cstf3	69	93.750	ENSPCAG00000008025	-	59	93.750	Procavia_capensis
ENSXETG00000021399	cstf3	100	77.023	ENSPCOG00000014417	CSTF3	87	76.603	Propithecus_coquereli
ENSXETG00000021399	cstf3	99	76.337	ENSPVAG00000002350	CSTF3	86	76.329	Pteropus_vampyrus
ENSXETG00000021399	cstf3	100	76.861	ENSPNYG00000018259	cstf3	88	75.994	Pundamilia_nyererei
ENSXETG00000021399	cstf3	100	77.023	ENSPNAG00000020182	cstf3	97	72.787	Pygocentrus_nattereri
ENSXETG00000021399	cstf3	99	79.869	ENSRNOG00000012089	Cstf3	97	79.837	Rattus_norvegicus
ENSXETG00000021399	cstf3	99	80.713	ENSRBIG00000044258	CSTF3	97	80.488	Rhinopithecus_bieti
ENSXETG00000021399	cstf3	100	80.583	ENSRROG00000043450	CSTF3	97	80.488	Rhinopithecus_roxellana
ENSXETG00000021399	cstf3	100	80.583	ENSSBOG00000024764	CSTF3	97	80.488	Saimiri_boliviensis_boliviensis
ENSXETG00000021399	cstf3	100	79.450	ENSSHAG00000018128	-	88	78.281	Sarcophilus_harrisii
ENSXETG00000021399	cstf3	100	70.388	ENSSHAG00000003135	-	88	69.375	Sarcophilus_harrisii
ENSXETG00000021399	cstf3	100	76.613	ENSSFOG00015022133	cstf3	88	75.781	Scleropages_formosus
ENSXETG00000021399	cstf3	100	76.214	ENSSMAG00000002197	cstf3	88	75.156	Scophthalmus_maximus
ENSXETG00000021399	cstf3	100	76.861	ENSSDUG00000020426	cstf3	88	75.781	Seriola_dumerili
ENSXETG00000021399	cstf3	100	76.861	ENSSLDG00000025649	cstf3	91	75.507	Seriola_lalandi_dorsalis
ENSXETG00000021399	cstf3	100	80.744	ENSSARG00000000391	CSTF3	88	79.531	Sorex_araneus
ENSXETG00000021399	cstf3	100	80.259	ENSSPUG00000010546	CSTF3	91	79.062	Sphenodon_punctatus
ENSXETG00000021399	cstf3	100	76.861	ENSSPAG00000004958	cstf3	88	75.781	Stegastes_partitus
ENSXETG00000021399	cstf3	100	80.421	ENSSSCG00000040954	CSTF3	88	79.219	Sus_scrofa
ENSXETG00000021399	cstf3	100	80.906	ENSTGUG00000005010	CSTF3	89	79.688	Taeniopygia_guttata
ENSXETG00000021399	cstf3	100	75.566	ENSTRUG00000004959	cstf3	91	72.656	Takifugu_rubripes
ENSXETG00000021399	cstf3	100	76.052	ENSTNIG00000013811	cstf3	88	75.000	Tetraodon_nigroviridis
ENSXETG00000021399	cstf3	100	77.832	ENSTBEG00000001544	CSTF3	86	77.939	Tupaia_belangeri
ENSXETG00000021399	cstf3	100	78.155	ENSTTRG00000016366	CSTF3	88	77.188	Tursiops_truncatus
ENSXETG00000021399	cstf3	100	80.744	ENSUMAG00000018971	CSTF3	97	80.650	Ursus_maritimus
ENSXETG00000021399	cstf3	100	80.421	ENSVPAG00000007800	CSTF3	88	79.219	Vicugna_pacos
ENSXETG00000021399	cstf3	100	80.583	ENSVVUG00000014938	CSTF3	97	80.488	Vulpes_vulpes
ENSXETG00000021399	cstf3	99	75.777	ENSXCOG00000011741	cstf3	97	75.772	Xiphophorus_couchianus
ENSXETG00000021399	cstf3	100	76.375	ENSXMAG00000009545	cstf3	88	75.312	Xiphophorus_maculatus