EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000021409 (Gene tree)
Gene ID: -
Gene Symbol: sf3b5
Alias: -
Full Name: splicing factor 3b subunit 5
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 261 bases
Position: chrGL173443.1:148836-149096
Accession: XB-GENE-5845857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000046281	SF3b10	PF07189.11	2.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000046281	-	261	-	ENSXETP00000046281	86 (aa)	-	Q0VFD4

Gene Model

Click here to download ENSXETG00000021409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000021409's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000021409	sf3b5	100	95.349	ENSG00000169976	SF3B5	100	95.349	Homo_sapiens
ENSXETG00000021409	sf3b5	100	94.186	ENSAPOG00000001721	sf3b5	100	94.186	Acanthochromis_polyacanthus
ENSXETG00000021409	sf3b5	100	96.512	ENSACIG00000008106	sf3b5	100	96.512	Amphilophus_citrinellus
ENSXETG00000021409	sf3b5	100	94.186	ENSAOCG00000023367	sf3b5	100	94.186	Amphiprion_ocellaris
ENSXETG00000021409	sf3b5	100	94.186	ENSAPEG00000004605	sf3b5	100	94.186	Amphiprion_percula
ENSXETG00000021409	sf3b5	100	95.349	ENSATEG00000009720	sf3b5	100	95.349	Anabas_testudineus
ENSXETG00000021409	sf3b5	100	96.512	ENSACAG00000007948	SF3B5	100	96.512	Anolis_carolinensis
ENSXETG00000021409	sf3b5	100	95.349	ENSANAG00000019999	SF3B5	100	95.349	Aotus_nancymaae
ENSXETG00000021409	sf3b5	100	96.512	ENSACLG00000022410	sf3b5	100	96.512	Astatotilapia_calliptera
ENSXETG00000021409	sf3b5	100	95.349	ENSBTAG00000009795	SF3B5	100	95.349	Bos_taurus
ENSXETG00000021409	sf3b5	100	95.349	ENSCJAG00000046566	SF3B5	100	95.349	Callithrix_jacchus
ENSXETG00000021409	sf3b5	100	95.349	ENSCAFG00000032495	SF3B5	100	95.349	Canis_familiaris
ENSXETG00000021409	sf3b5	100	95.349	ENSCAFG00020000873	SF3B5	100	95.349	Canis_lupus_dingo
ENSXETG00000021409	sf3b5	100	95.349	ENSCHIG00000007987	SF3B5	100	95.349	Capra_hircus
ENSXETG00000021409	sf3b5	100	95.349	ENSTSYG00000012236	SF3B5	100	95.349	Carlito_syrichta
ENSXETG00000021409	sf3b5	100	95.349	ENSCPOG00000012435	SF3B5	100	95.349	Cavia_porcellus
ENSXETG00000021409	sf3b5	100	95.349	ENSCCAG00000006528	SF3B5	100	95.349	Cebus_capucinus
ENSXETG00000021409	sf3b5	100	95.349	ENSCATG00000010192	SF3B5	100	95.349	Cercocebus_atys
ENSXETG00000021409	sf3b5	100	95.349	ENSCLAG00000017802	SF3B5	100	95.349	Chinchilla_lanigera
ENSXETG00000021409	sf3b5	100	95.349	ENSCSAG00000000187	SF3B5	100	95.349	Chlorocebus_sabaeus
ENSXETG00000021409	sf3b5	100	96.512	ENSCPBG00000017148	SF3B5	100	96.512	Chrysemys_picta_bellii
ENSXETG00000021409	sf3b5	98	73.810	ENSCING00000021953	-	98	73.810	Ciona_intestinalis
ENSXETG00000021409	sf3b5	100	95.349	ENSCANG00000002639	SF3B5	100	95.349	Colobus_angolensis_palliatus
ENSXETG00000021409	sf3b5	100	94.186	ENSCGRG00001007249	Sf3b5	100	94.186	Cricetulus_griseus_chok1gshd
ENSXETG00000021409	sf3b5	100	94.186	ENSCGRG00000019185	Sf3b5	100	94.186	Cricetulus_griseus_crigri
ENSXETG00000021409	sf3b5	100	96.512	ENSCSEG00000003216	sf3b5	100	96.512	Cynoglossus_semilaevis
ENSXETG00000021409	sf3b5	100	95.349	ENSCVAG00000005040	sf3b5	100	95.349	Cyprinodon_variegatus
ENSXETG00000021409	sf3b5	100	93.023	ENSDARG00000016855	sf3b5	100	93.023	Danio_rerio
ENSXETG00000021409	sf3b5	100	95.349	ENSDNOG00000048829	SF3B5	82	95.349	Dasypus_novemcinctus
ENSXETG00000021409	sf3b5	100	95.349	ENSDORG00000005838	Sf3b5	100	95.349	Dipodomys_ordii
ENSXETG00000021409	sf3b5	99	82.353	FBgn0040534	Sf3b5	100	82.353	Drosophila_melanogaster
ENSXETG00000021409	sf3b5	100	95.349	ENSETEG00000004047	SF3B5	100	95.349	Echinops_telfairi
ENSXETG00000021409	sf3b5	99	83.529	ENSEBUG00000002311	sf3b5	100	83.529	Eptatretus_burgeri
ENSXETG00000021409	sf3b5	100	95.349	ENSEASG00005009522	SF3B5	100	95.349	Equus_asinus_asinus
ENSXETG00000021409	sf3b5	100	95.349	ENSECAG00000005457	SF3B5	100	95.349	Equus_caballus
ENSXETG00000021409	sf3b5	100	94.186	ENSELUG00000014290	SF3B5	100	94.186	Esox_lucius
ENSXETG00000021409	sf3b5	100	95.349	ENSFCAG00000000936	SF3B5	100	95.349	Felis_catus
ENSXETG00000021409	sf3b5	100	95.349	ENSFALG00000015012	SF3B5	100	95.349	Ficedula_albicollis
ENSXETG00000021409	sf3b5	100	95.349	ENSFDAG00000003664	SF3B5	100	95.349	Fukomys_damarensis
ENSXETG00000021409	sf3b5	100	95.349	ENSFHEG00000020301	sf3b5	100	95.349	Fundulus_heteroclitus
ENSXETG00000021409	sf3b5	100	93.023	ENSGMOG00000019972	sf3b5	100	93.023	Gadus_morhua
ENSXETG00000021409	sf3b5	100	97.674	ENSGALG00000030824	SF3B5	100	97.674	Gallus_gallus
ENSXETG00000021409	sf3b5	100	95.349	ENSGAFG00000000271	sf3b5	100	95.349	Gambusia_affinis
ENSXETG00000021409	sf3b5	100	95.349	ENSGACG00000010363	sf3b5	100	95.349	Gasterosteus_aculeatus
ENSXETG00000021409	sf3b5	100	90.698	ENSGAGG00000000646	-	100	90.698	Gopherus_agassizii
ENSXETG00000021409	sf3b5	100	96.512	ENSGAGG00000011434	SF3B5	100	96.512	Gopherus_agassizii
ENSXETG00000021409	sf3b5	100	95.349	ENSGGOG00000001537	SF3B5	100	95.349	Gorilla_gorilla
ENSXETG00000021409	sf3b5	100	96.512	ENSHBUG00000008925	sf3b5	100	96.512	Haplochromis_burtoni
ENSXETG00000021409	sf3b5	100	95.349	ENSHGLG00000021406	SF3B5	100	95.349	Heterocephalus_glaber_female
ENSXETG00000021409	sf3b5	100	95.349	ENSHGLG00100020370	SF3B5	100	95.349	Heterocephalus_glaber_male
ENSXETG00000021409	sf3b5	100	94.186	ENSHCOG00000009115	-	100	94.186	Hippocampus_comes
ENSXETG00000021409	sf3b5	100	94.186	ENSHCOG00000016802	sf3b5	100	94.186	Hippocampus_comes
ENSXETG00000021409	sf3b5	100	94.186	ENSHCOG00000016806	sf3b5	100	94.186	Hippocampus_comes
ENSXETG00000021409	sf3b5	100	95.349	ENSIPUG00000015166	sf3b5	100	95.349	Ictalurus_punctatus
ENSXETG00000021409	sf3b5	100	95.349	ENSSTOG00000003347	SF3B5	100	95.349	Ictidomys_tridecemlineatus
ENSXETG00000021409	sf3b5	100	95.349	ENSJJAG00000001857	Sf3b5	100	95.349	Jaculus_jaculus
ENSXETG00000021409	sf3b5	100	95.349	ENSKMAG00000002249	sf3b5	100	95.349	Kryptolebias_marmoratus
ENSXETG00000021409	sf3b5	100	95.349	ENSLBEG00000019847	sf3b5	100	95.349	Labrus_bergylta
ENSXETG00000021409	sf3b5	100	95.349	ENSLACG00000000946	SF3B5	100	95.349	Latimeria_chalumnae
ENSXETG00000021409	sf3b5	100	96.512	ENSLOCG00000017352	sf3b5	100	96.512	Lepisosteus_oculatus
ENSXETG00000021409	sf3b5	100	95.349	ENSLAFG00000032489	SF3B5	100	95.349	Loxodonta_africana
ENSXETG00000021409	sf3b5	100	95.349	ENSMFAG00000029753	SF3B5	100	95.349	Macaca_fascicularis
ENSXETG00000021409	sf3b5	100	95.349	ENSMMUG00000047691	SF3B5	100	95.349	Macaca_mulatta
ENSXETG00000021409	sf3b5	100	95.349	ENSMNEG00000028236	SF3B5	100	95.349	Macaca_nemestrina
ENSXETG00000021409	sf3b5	100	95.349	ENSMLEG00000007622	SF3B5	100	95.349	Mandrillus_leucophaeus
ENSXETG00000021409	sf3b5	100	94.186	ENSMAMG00000021639	sf3b5	100	94.186	Mastacembelus_armatus
ENSXETG00000021409	sf3b5	100	96.512	ENSMZEG00005028115	SF3B5	100	96.512	Maylandia_zebra
ENSXETG00000021409	sf3b5	100	83.721	ENSMZEG00005027407	sf3b5	100	83.721	Maylandia_zebra
ENSXETG00000021409	sf3b5	100	96.512	ENSMZEG00005027408	sf3b5	100	96.512	Maylandia_zebra
ENSXETG00000021409	sf3b5	100	97.674	ENSMGAG00000015849	SF3B5	100	97.674	Meleagris_gallopavo
ENSXETG00000021409	sf3b5	100	94.186	ENSMAUG00000008283	Sf3b5	100	94.186	Mesocricetus_auratus
ENSXETG00000021409	sf3b5	100	95.349	ENSMICG00000014922	SF3B5	100	95.349	Microcebus_murinus
ENSXETG00000021409	sf3b5	100	94.186	ENSMOCG00000001713	Sf3b5	100	94.186	Microtus_ochrogaster
ENSXETG00000021409	sf3b5	100	94.186	ENSMMOG00000007956	sf3b5	100	94.186	Mola_mola
ENSXETG00000021409	sf3b5	100	95.349	ENSMODG00000023291	SF3B5	83	95.349	Monodelphis_domestica
ENSXETG00000021409	sf3b5	91	92.593	ENSMALG00000020357	sf3b5	99	92.593	Monopterus_albus
ENSXETG00000021409	sf3b5	100	94.186	MGP_CAROLIEiJ_G0015120	Sf3b5	100	94.186	Mus_caroli
ENSXETG00000021409	sf3b5	100	94.186	ENSMUSG00000078348	Sf3b5	100	94.186	Mus_musculus
ENSXETG00000021409	sf3b5	100	94.186	MGP_PahariEiJ_G0023739	Sf3b5	100	94.186	Mus_pahari
ENSXETG00000021409	sf3b5	100	94.186	MGP_SPRETEiJ_G0015928	Sf3b5	100	94.186	Mus_spretus
ENSXETG00000021409	sf3b5	100	95.349	ENSMPUG00000018379	SF3B5	100	95.349	Mustela_putorius_furo
ENSXETG00000021409	sf3b5	93	96.250	ENSMLUG00000025546	-	93	96.250	Myotis_lucifugus
ENSXETG00000021409	sf3b5	100	93.023	ENSMLUG00000010802	-	100	93.023	Myotis_lucifugus
ENSXETG00000021409	sf3b5	100	95.349	ENSMLUG00000028504	-	100	95.349	Myotis_lucifugus
ENSXETG00000021409	sf3b5	100	95.349	ENSNGAG00000010732	Sf3b5	100	95.349	Nannospalax_galili
ENSXETG00000021409	sf3b5	100	96.512	ENSNBRG00000014383	sf3b5	100	96.512	Neolamprologus_brichardi
ENSXETG00000021409	sf3b5	100	95.349	ENSNLEG00000019307	SF3B5	100	95.349	Nomascus_leucogenys
ENSXETG00000021409	sf3b5	100	95.349	ENSMEUG00000005445	-	100	95.349	Notamacropus_eugenii
ENSXETG00000021409	sf3b5	100	95.349	ENSMEUG00000005440	-	100	95.349	Notamacropus_eugenii
ENSXETG00000021409	sf3b5	100	96.512	ENSOPRG00000015107	SF3B5	100	96.512	Ochotona_princeps
ENSXETG00000021409	sf3b5	100	95.349	ENSODEG00000019507	SF3B5	100	95.349	Octodon_degus
ENSXETG00000021409	sf3b5	100	96.512	ENSONIG00000020725	sf3b5	100	96.512	Oreochromis_niloticus
ENSXETG00000021409	sf3b5	69	93.220	ENSOANG00000015301	SF3B5	97	93.220	Ornithorhynchus_anatinus
ENSXETG00000021409	sf3b5	100	95.349	ENSOCUG00000008752	SF3B5	100	95.349	Oryctolagus_cuniculus
ENSXETG00000021409	sf3b5	100	95.349	ENSORLG00000004925	sf3b5	100	95.349	Oryzias_latipes
ENSXETG00000021409	sf3b5	100	95.349	ENSORLG00020011625	sf3b5	100	95.349	Oryzias_latipes_hni
ENSXETG00000021409	sf3b5	100	95.349	ENSORLG00015017061	sf3b5	100	95.349	Oryzias_latipes_hsok
ENSXETG00000021409	sf3b5	100	95.349	ENSOMEG00000010620	sf3b5	100	95.349	Oryzias_melastigma
ENSXETG00000021409	sf3b5	100	95.349	ENSOGAG00000012152	SF3B5	100	95.349	Otolemur_garnettii
ENSXETG00000021409	sf3b5	92	97.468	ENSOARG00000019486	-	95	97.468	Ovis_aries
ENSXETG00000021409	sf3b5	100	91.860	ENSOARG00000002617	SF3B5	100	91.860	Ovis_aries
ENSXETG00000021409	sf3b5	100	95.349	ENSPPAG00000012940	SF3B5	100	95.349	Pan_paniscus
ENSXETG00000021409	sf3b5	100	95.349	ENSPPRG00000021262	SF3B5	100	95.349	Panthera_pardus
ENSXETG00000021409	sf3b5	100	95.349	ENSPTIG00000001952	SF3B5	100	95.349	Panthera_tigris_altaica
ENSXETG00000021409	sf3b5	100	95.349	ENSPTRG00000018676	SF3B5	100	95.349	Pan_troglodytes
ENSXETG00000021409	sf3b5	100	95.349	ENSPANG00000034242	SF3B5	100	95.349	Papio_anubis
ENSXETG00000021409	sf3b5	100	94.186	ENSPKIG00000006057	sf3b5	100	94.186	Paramormyrops_kingsleyae
ENSXETG00000021409	sf3b5	100	96.512	ENSPSIG00000001262	SF3B5	100	96.512	Pelodiscus_sinensis
ENSXETG00000021409	sf3b5	100	94.186	ENSPMGG00000014804	sf3b5	100	94.186	Periophthalmus_magnuspinnatus
ENSXETG00000021409	sf3b5	100	94.186	ENSPEMG00000012931	Sf3b5	100	94.186	Peromyscus_maniculatus_bairdii
ENSXETG00000021409	sf3b5	100	88.372	ENSPMAG00000010296	sf3b5	100	88.372	Petromyzon_marinus
ENSXETG00000021409	sf3b5	100	74.419	ENSPCIG00000025007	-	100	74.419	Phascolarctos_cinereus
ENSXETG00000021409	sf3b5	93	98.750	ENSPCIG00000011344	-	78	98.750	Phascolarctos_cinereus
ENSXETG00000021409	sf3b5	100	95.349	ENSPFOG00000019994	sf3b5	100	95.349	Poecilia_formosa
ENSXETG00000021409	sf3b5	100	95.349	ENSPLAG00000008412	sf3b5	100	95.349	Poecilia_latipinna
ENSXETG00000021409	sf3b5	100	95.349	ENSPMEG00000020050	sf3b5	100	95.349	Poecilia_mexicana
ENSXETG00000021409	sf3b5	100	95.349	ENSPREG00000009242	sf3b5	100	95.349	Poecilia_reticulata
ENSXETG00000021409	sf3b5	100	95.349	ENSPPYG00000017068	SF3B5	100	95.349	Pongo_abelii
ENSXETG00000021409	sf3b5	100	95.349	ENSPCAG00000009332	SF3B5	100	95.349	Procavia_capensis
ENSXETG00000021409	sf3b5	100	95.349	ENSPCOG00000013754	SF3B5	100	95.349	Propithecus_coquereli
ENSXETG00000021409	sf3b5	56	100.000	ENSPVAG00000002820	SF3B5	100	100.000	Pteropus_vampyrus
ENSXETG00000021409	sf3b5	100	96.512	ENSPNYG00000002075	sf3b5	100	96.512	Pundamilia_nyererei
ENSXETG00000021409	sf3b5	100	94.186	ENSPNAG00000004942	sf3b5	100	94.186	Pygocentrus_nattereri
ENSXETG00000021409	sf3b5	100	94.186	ENSRNOG00000014908	Sf3b5	100	94.186	Rattus_norvegicus
ENSXETG00000021409	sf3b5	100	95.349	ENSRBIG00000006301	SF3B5	100	95.349	Rhinopithecus_bieti
ENSXETG00000021409	sf3b5	100	95.349	ENSRROG00000037067	SF3B5	100	95.349	Rhinopithecus_roxellana
ENSXETG00000021409	sf3b5	100	95.349	ENSSBOG00000006122	SF3B5	100	95.349	Saimiri_boliviensis_boliviensis
ENSXETG00000021409	sf3b5	100	94.186	ENSSHAG00000015670	SF3B5	100	94.186	Sarcophilus_harrisii
ENSXETG00000021409	sf3b5	100	95.349	ENSSFOG00015015767	sf3b5	100	95.349	Scleropages_formosus
ENSXETG00000021409	sf3b5	100	94.186	ENSSMAG00000018852	sf3b5	100	94.186	Scophthalmus_maximus
ENSXETG00000021409	sf3b5	100	95.349	ENSSDUG00000018161	sf3b5	100	95.349	Seriola_dumerili
ENSXETG00000021409	sf3b5	100	95.349	ENSSLDG00000014547	sf3b5	100	95.349	Seriola_lalandi_dorsalis
ENSXETG00000021409	sf3b5	100	95.349	ENSSARG00000007820	SF3B5	100	95.349	Sorex_araneus
ENSXETG00000021409	sf3b5	100	94.186	ENSSPAG00000017371	-	100	94.186	Stegastes_partitus
ENSXETG00000021409	sf3b5	100	94.186	ENSSPAG00000009244	sf3b5	100	94.186	Stegastes_partitus
ENSXETG00000021409	sf3b5	100	95.349	ENSSSCG00000035578	SF3B5	100	95.349	Sus_scrofa
ENSXETG00000021409	sf3b5	100	97.674	ENSTGUG00000010810	SF3B5	100	97.674	Taeniopygia_guttata
ENSXETG00000021409	sf3b5	100	95.349	ENSTRUG00000005577	sf3b5	100	95.349	Takifugu_rubripes
ENSXETG00000021409	sf3b5	100	95.349	ENSTNIG00000001265	sf3b5	100	95.349	Tetraodon_nigroviridis
ENSXETG00000021409	sf3b5	100	96.512	ENSTBEG00000003072	SF3B5	100	96.512	Tupaia_belangeri
ENSXETG00000021409	sf3b5	100	95.349	ENSTTRG00000008817	SF3B5	100	95.349	Tursiops_truncatus
ENSXETG00000021409	sf3b5	100	95.349	ENSUAMG00000027296	SF3B5	100	95.349	Ursus_americanus
ENSXETG00000021409	sf3b5	100	95.349	ENSUMAG00000005448	SF3B5	100	95.349	Ursus_maritimus
ENSXETG00000021409	sf3b5	100	95.349	ENSVPAG00000003826	SF3B5	100	95.349	Vicugna_pacos
ENSXETG00000021409	sf3b5	100	95.349	ENSVVUG00000004703	SF3B5	100	95.349	Vulpes_vulpes
ENSXETG00000021409	sf3b5	100	95.349	ENSXMAG00000019971	sf3b5	100	95.349	Xiphophorus_maculatus