EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000021445 (Gene tree)
Gene ID: -
Gene Symbol: chd6
Alias: -
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 29318 bases
Position: chrGL172674.1:3136812-3166129
Accession: XB-GENE-5964535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000000740	ResIII	PF04851.15	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000000740	-	7827	-	ENSXETP00000000740	2608 (aa)	-	F6VR65

Gene Model

Click here to download ENSXETG00000021445's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000021445's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000021445	chd6	53	52.525	ENSXETG00000017194	CHD8	88	60.504
ENSXETG00000021445	chd6	75	58.401	ENSXETG00000026004	chd8	71	59.552
ENSXETG00000021445	chd6	81	55.787	ENSXETG00000000349	chd9	70	58.339

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000021445	chd6	89	69.871	ENSG00000124177	CHD6	98	85.328	Homo_sapiens
ENSXETG00000021445	chd6	75	67.787	ENSAPOG00000013736	chd6	67	67.544	Acanthochromis_polyacanthus
ENSXETG00000021445	chd6	99	60.950	ENSAMEG00000009496	CHD6	99	61.073	Ailuropoda_melanoleuca
ENSXETG00000021445	chd6	79	65.269	ENSATEG00000005608	chd6	64	69.162	Anabas_testudineus
ENSXETG00000021445	chd6	87	72.522	ENSAPLG00000015592	CHD6	82	75.255	Anas_platyrhynchos
ENSXETG00000021445	chd6	87	67.321	ENSACAG00000006842	CHD6	81	69.955	Anolis_carolinensis
ENSXETG00000021445	chd6	62	71.197	ENSANAG00000037548	CHD6	99	64.037	Aotus_nancymaae
ENSXETG00000021445	chd6	77	65.739	ENSAMXG00000009576	chd6	72	67.056	Astyanax_mexicanus
ENSXETG00000021445	chd6	87	70.998	ENSBTAG00000005733	CHD6	87	70.971	Bos_taurus
ENSXETG00000021445	chd6	99	60.904	ENSCJAG00000017920	CHD6	99	64.220	Callithrix_jacchus
ENSXETG00000021445	chd6	91	68.750	ENSCAFG00000009236	CHD6	94	68.926	Canis_familiaris
ENSXETG00000021445	chd6	91	68.788	ENSCAFG00020012906	CHD6	99	66.514	Canis_lupus_dingo
ENSXETG00000021445	chd6	89	69.610	ENSCHIG00000017606	CHD6	91	69.733	Capra_hircus
ENSXETG00000021445	chd6	83	60.630	ENSTSYG00000014635	CHD6	99	60.289	Carlito_syrichta
ENSXETG00000021445	chd6	91	71.065	ENSCPOG00000015641	CHD6	91	71.395	Cavia_porcellus
ENSXETG00000021445	chd6	87	71.107	ENSCCAG00000036828	CHD6	99	64.037	Cebus_capucinus
ENSXETG00000021445	chd6	89	69.651	ENSCATG00000039248	CHD6	99	64.037	Cercocebus_atys
ENSXETG00000021445	chd6	99	60.000	ENSCLAG00000013743	CHD6	99	60.211	Chinchilla_lanigera
ENSXETG00000021445	chd6	89	69.702	ENSCSAG00000013997	CHD6	82	72.819	Chlorocebus_sabaeus
ENSXETG00000021445	chd6	90	66.645	ENSCHOG00000012647	CHD6	95	66.426	Choloepus_hoffmanni
ENSXETG00000021445	chd6	88	73.213	ENSCPBG00000019382	CHD6	88	72.009	Chrysemys_picta_bellii
ENSXETG00000021445	chd6	64	69.726	ENSCANG00000043435	CHD6	99	64.037	Colobus_angolensis_palliatus
ENSXETG00000021445	chd6	100	60.619	ENSCGRG00001002694	Chd6	100	60.400	Cricetulus_griseus_chok1gshd
ENSXETG00000021445	chd6	78	69.909	ENSDARG00000017244	chd6	73	71.516	Danio_rerio
ENSXETG00000021445	chd6	99	60.327	ENSDNOG00000004176	CHD6	99	60.561	Dasypus_novemcinctus
ENSXETG00000021445	chd6	90	69.937	ENSEASG00005023433	CHD6	95	76.118	Equus_asinus_asinus
ENSXETG00000021445	chd6	91	69.764	ENSECAG00000011761	CHD6	92	69.949	Equus_caballus
ENSXETG00000021445	chd6	72	70.808	ENSELUG00000012309	chd6	92	70.808	Esox_lucius
ENSXETG00000021445	chd6	99	60.830	ENSFCAG00000003572	CHD6	99	61.008	Felis_catus
ENSXETG00000021445	chd6	88	71.240	ENSFALG00000012563	CHD6	87	71.010	Ficedula_albicollis
ENSXETG00000021445	chd6	62	72.070	ENSFDAG00000013791	CHD6	99	60.847	Fukomys_damarensis
ENSXETG00000021445	chd6	71	61.219	ENSGMOG00000011715	chd6	82	62.250	Gadus_morhua
ENSXETG00000021445	chd6	76	63.802	ENSGACG00000000037	chd6	81	65.209	Gasterosteus_aculeatus
ENSXETG00000021445	chd6	89	69.798	ENSGGOG00000013123	CHD6	99	64.037	Gorilla_gorilla
ENSXETG00000021445	chd6	78	64.059	ENSHBUG00000014701	chd6	64	68.225	Haplochromis_burtoni
ENSXETG00000021445	chd6	99	60.065	ENSHGLG00000004548	CHD6	99	60.291	Heterocephalus_glaber_female
ENSXETG00000021445	chd6	99	60.065	ENSHGLG00100006401	CHD6	99	60.291	Heterocephalus_glaber_male
ENSXETG00000021445	chd6	75	71.488	ENSIPUG00000003692	chd6	70	76.425	Ictalurus_punctatus
ENSXETG00000021445	chd6	100	61.055	ENSSTOG00000013382	CHD6	100	60.421	Ictidomys_tridecemlineatus
ENSXETG00000021445	chd6	81	70.715	ENSLACG00000010881	CHD6	80	71.501	Latimeria_chalumnae
ENSXETG00000021445	chd6	69	72.708	ENSLOCG00000007386	chd6	73	72.708	Lepisosteus_oculatus
ENSXETG00000021445	chd6	99	60.735	ENSLAFG00000012144	CHD6	99	60.768	Loxodonta_africana
ENSXETG00000021445	chd6	89	69.815	ENSMFAG00000032830	CHD6	99	64.037	Macaca_fascicularis
ENSXETG00000021445	chd6	89	69.815	ENSMMUG00000020458	CHD6	99	64.037	Macaca_mulatta
ENSXETG00000021445	chd6	89	69.871	ENSMNEG00000040847	CHD6	99	64.037	Macaca_nemestrina
ENSXETG00000021445	chd6	89	69.568	ENSMLEG00000031965	CHD6	99	64.037	Mandrillus_leucophaeus
ENSXETG00000021445	chd6	78	64.212	ENSMAMG00000013111	chd6	65	68.852	Mastacembelus_armatus
ENSXETG00000021445	chd6	87	71.016	ENSMGAG00000001121	CHD6	83	73.982	Meleagris_gallopavo
ENSXETG00000021445	chd6	91	70.349	ENSMICG00000016641	CHD6	99	63.853	Microcebus_murinus
ENSXETG00000021445	chd6	78	73.519	ENSMODG00000000720	-	89	73.605	Monodelphis_domestica
ENSXETG00000021445	chd6	100	60.692	MGP_CAROLIEiJ_G0024604	Chd6	100	71.825	Mus_caroli
ENSXETG00000021445	chd6	100	60.634	ENSMUSG00000057133	Chd6	100	71.741	Mus_musculus
ENSXETG00000021445	chd6	100	60.692	MGP_PahariEiJ_G0026048	Chd6	100	71.993	Mus_pahari
ENSXETG00000021445	chd6	100	60.561	MGP_SPRETEiJ_G0025526	Chd6	100	71.741	Mus_spretus
ENSXETG00000021445	chd6	91	68.733	ENSMPUG00000017695	CHD6	91	68.774	Mustela_putorius_furo
ENSXETG00000021445	chd6	93	69.949	ENSMLUG00000016247	CHD6	93	70.074	Myotis_lucifugus
ENSXETG00000021445	chd6	78	65.682	ENSNBRG00000013839	chd6	76	69.313	Neolamprologus_brichardi
ENSXETG00000021445	chd6	89	68.335	ENSNLEG00000006496	CHD6	82	71.942	Nomascus_leucogenys
ENSXETG00000021445	chd6	87	70.828	ENSOPRG00000013376	-	87	70.811	Ochotona_princeps
ENSXETG00000021445	chd6	79	68.134	ENSONIG00000000393	chd6	78	71.368	Oreochromis_niloticus
ENSXETG00000021445	chd6	76	71.412	ENSOANG00000014347	CHD6	78	70.934	Ornithorhynchus_anatinus
ENSXETG00000021445	chd6	87	70.520	ENSOCUG00000012394	CHD6	87	70.616	Oryctolagus_cuniculus
ENSXETG00000021445	chd6	75	66.601	ENSORLG00020021891	chd6	95	62.525	Oryzias_latipes_hni
ENSXETG00000021445	chd6	99	60.301	ENSOGAG00000002427	CHD6	99	60.359	Otolemur_garnettii
ENSXETG00000021445	chd6	89	68.218	ENSOARG00000002597	CHD6	89	68.107	Ovis_aries
ENSXETG00000021445	chd6	99	60.860	ENSPPRG00000014756	CHD6	99	61.044	Panthera_pardus
ENSXETG00000021445	chd6	99	60.662	ENSPTIG00000011094	CHD6	99	60.912	Panthera_tigris_altaica
ENSXETG00000021445	chd6	89	69.927	ENSPTRG00000013504	CHD6	99	64.037	Pan_troglodytes
ENSXETG00000021445	chd6	89	69.663	ENSPANG00000025554	CHD6	99	64.037	Papio_anubis
ENSXETG00000021445	chd6	76	69.199	ENSPKIG00000005578	chd6	72	72.098	Paramormyrops_kingsleyae
ENSXETG00000021445	chd6	73	69.320	ENSPMGG00000014877	chd6	84	69.320	Periophthalmus_magnuspinnatus
ENSXETG00000021445	chd6	87	72.875	ENSPCIG00000028037	CHD6	88	72.833	Phascolarctos_cinereus
ENSXETG00000021445	chd6	75	64.677	ENSPLAG00000003128	chd6	69	66.303	Poecilia_latipinna
ENSXETG00000021445	chd6	72	67.256	ENSPREG00000022653	chd6	99	65.751	Poecilia_reticulata
ENSXETG00000021445	chd6	90	69.675	ENSPPYG00000011016	CHD6	82	73.007	Pongo_abelii
ENSXETG00000021445	chd6	90	71.016	ENSPCOG00000001089	CHD6	99	64.037	Propithecus_coquereli
ENSXETG00000021445	chd6	78	66.928	ENSPNYG00000022516	chd6	76	70.726	Pundamilia_nyererei
ENSXETG00000021445	chd6	74	67.740	ENSPNAG00000012825	chd6	74	70.021	Pygocentrus_nattereri
ENSXETG00000021445	chd6	100	59.978	ENSRNOG00000016744	Chd6	100	59.505	Rattus_norvegicus
ENSXETG00000021445	chd6	89	69.871	ENSSBOG00000022089	CHD6	99	64.037	Saimiri_boliviensis_boliviensis
ENSXETG00000021445	chd6	88	71.823	ENSSHAG00000017072	CHD6	88	72.069	Sarcophilus_harrisii
ENSXETG00000021445	chd6	77	68.920	ENSSFOG00015012920	chd6	74	70.355	Scleropages_formosus
ENSXETG00000021445	chd6	53	95.395	ENSSARG00000002615	-	55	95.395	Sorex_araneus
ENSXETG00000021445	chd6	88	69.860	ENSSSCG00000007360	CHD6	91	69.854	Sus_scrofa
ENSXETG00000021445	chd6	84	73.818	ENSTGUG00000003179	CHD6	86	74.438	Taeniopygia_guttata
ENSXETG00000021445	chd6	71	69.002	ENSTNIG00000017487	chd6	82	68.439	Tetraodon_nigroviridis
ENSXETG00000021445	chd6	88	67.538	ENSTTRG00000013438	CHD6	88	67.657	Tursiops_truncatus
ENSXETG00000021445	chd6	91	68.531	ENSUAMG00000024036	CHD6	95	65.637	Ursus_americanus
ENSXETG00000021445	chd6	92	69.938	ENSUMAG00000002017	CHD6	91	69.903	Ursus_maritimus
ENSXETG00000021445	chd6	82	65.943	ENSVPAG00000007941	CHD6	83	65.487	Vicugna_pacos
ENSXETG00000021445	chd6	91	68.805	ENSVVUG00000029164	CHD6	99	60.764	Vulpes_vulpes