EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXETG00000021448 (Gene tree)
Gene ID
-
Gene Symbol
csde1
Alias
-
Full Name
Xenopus tropicalis cold shock domain containing E1 (csde1)%2C mRNA.
Gene Type
protein_coding
Species
Xenopus_tropicalis
Status
putative
Strand
Plus strand
Length
43677 bases
Position
chrGL172805.1:160711-204387
Accession
NM_001030529
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXETP00000062842CSDPF00313.223e-8115
ENSXETP00000062842CSDPF00313.223e-8125
ENSXETP00000062842CSDPF00313.223e-8135
ENSXETP00000062842CSDPF00313.223e-8145
ENSXETP00000062842CSDPF00313.223e-8155
ENSXETP00000046371CSDPF00313.223.7e-7314
ENSXETP00000046371CSDPF00313.223.7e-7324
ENSXETP00000046371CSDPF00313.223.7e-7334
ENSXETP00000046371CSDPF00313.223.7e-7344
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXETT00000046371-3637-ENSXETP00000046371799 (aa)-Q501Q4
ENSXETT00000063491-3640-ENSXETP00000062842800 (aa)-F6RX48
Gene Model
Click here to download ENSXETG00000021448's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000021448's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXETG00000021448csde110086.017ENSG00000009307CSDE110097.826Homo_sapiens
ENSXETG00000021448csde110076.185ENSAPOG00000015538csde110075.816Acanthochromis_polyacanthus
ENSXETG00000021448csde110081.523ENSAMEG00000017129CSDE19481.523Ailuropoda_melanoleuca
ENSXETG00000021448csde18879.839ENSACIG00000015175csde110079.839Amphilophus_citrinellus
ENSXETG00000021448csde110076.428ENSAOCG00000011510csde110075.746Amphiprion_ocellaris
ENSXETG00000021448csde110078.234ENSAPEG00000007194csde110076.428Amphiprion_percula
ENSXETG00000021448csde110075.498ENSATEG00000003864csde110075.498Anabas_testudineus
ENSXETG00000021448csde110082.647ENSAPLG00000008797CSDE110082.647Anas_platyrhynchos
ENSXETG00000021448csde110087.266ENSACAG00000003120CSDE110087.266Anolis_carolinensis
ENSXETG00000021448csde17967.797ENSANAG00000028396-9167.797Aotus_nancymaae
ENSXETG00000021448csde110085.768ENSANAG00000024665CSDE19585.768Aotus_nancymaae
ENSXETG00000021448csde110077.709ENSACLG00000013296csde110077.709Astatotilapia_calliptera
ENSXETG00000021448csde110074.907ENSAMXG00000007436csde110074.907Astyanax_mexicanus
ENSXETG00000021448csde110085.768ENSBTAG00000000678CSDE110082.147Bos_taurus
ENSXETG00000021448csde110085.893ENSCJAG00000012565CSDE19585.893Callithrix_jacchus
ENSXETG00000021448csde19882.038ENSCAFG00000009618CSDE19482.038Canis_familiaris
ENSXETG00000021448csde110082.272ENSCAFG00020000481CSDE110082.272Canis_lupus_dingo
ENSXETG00000021448csde110085.768ENSCHIG00000017250CSDE110082.147Capra_hircus
ENSXETG00000021448csde110085.893ENSTSYG00000003747CSDE110085.893Carlito_syrichta
ENSXETG00000021448csde110090.184ENSCAPG00000015128CSDE110090.184Cavia_aperea
ENSXETG00000021448csde110081.024ENSCPOG00000040388CSDE110081.024Cavia_porcellus
ENSXETG00000021448csde19561.229ENSCCAG00000033677-9961.229Cebus_capucinus
ENSXETG00000021448csde110085.893ENSCCAG00000036794CSDE110085.893Cebus_capucinus
ENSXETG00000021448csde19760.754ENSCCAG00000030878-9160.754Cebus_capucinus
ENSXETG00000021448csde110086.017ENSCATG00000036962CSDE19586.017Cercocebus_atys
ENSXETG00000021448csde110085.893ENSCLAG00000006618CSDE110085.893Chinchilla_lanigera
ENSXETG00000021448csde110086.017ENSCSAG00000001658CSDE19586.017Chlorocebus_sabaeus
ENSXETG00000021448csde110094.175ENSCHOG00000000918CSDE18594.175Choloepus_hoffmanni
ENSXETG00000021448csde110087.016ENSCPBG00000016547CSDE19593.447Chrysemys_picta_bellii
ENSXETG00000021448csde19744.214ENSCING00000014465-9644.214Ciona_intestinalis
ENSXETG00000021448csde19742.086ENSCSAVG00000008100-9942.086Ciona_savignyi
ENSXETG00000021448csde110086.017ENSCANG00000035096CSDE19586.017Colobus_angolensis_palliatus
ENSXETG00000021448csde19088.722ENSCANG00000031069-9388.722Colobus_angolensis_palliatus
ENSXETG00000021448csde110067.291ENSCGRG00001014011-10067.291Cricetulus_griseus_chok1gshd
ENSXETG00000021448csde110085.144ENSCGRG00001016833-10085.144Cricetulus_griseus_chok1gshd
ENSXETG00000021448csde19779.823ENSCGRG00000002225-10079.823Cricetulus_griseus_crigri
ENSXETG00000021448csde110070.611ENSCGRG00000005831-10070.611Cricetulus_griseus_crigri
ENSXETG00000021448csde110075.787ENSCSEG00000002620csde110075.592Cynoglossus_semilaevis
ENSXETG00000021448csde110077.958ENSCVAG00000001344csde110077.571Cyprinodon_variegatus
ENSXETG00000021448csde110078.109ENSDARG00000074758csde110081.646Danio_rerio
ENSXETG00000021448csde15770.435ENSDNOG00000034464-9970.435Dasypus_novemcinctus
ENSXETG00000021448csde110082.419ENSDNOG00000010287-9382.419Dasypus_novemcinctus
ENSXETG00000021448csde110085.268ENSDORG00000011609Csde110085.268Dipodomys_ordii
ENSXETG00000021448csde19648.374FBgn0263352Unr8247.791Drosophila_melanogaster
ENSXETG00000021448csde19392.562ENSETEG00000002491-7492.562Echinops_telfairi
ENSXETG00000021448csde19173.273ENSETEG00000006280-10073.273Echinops_telfairi
ENSXETG00000021448csde17659.736ENSETEG00000007109-9959.736Echinops_telfairi
ENSXETG00000021448csde19963.750ENSETEG00000013678-9963.750Echinops_telfairi
ENSXETG00000021448csde19955.583ENSEBUG00000008647csde19954.396Eptatretus_burgeri
ENSXETG00000021448csde110086.017ENSEASG00005006284CSDE110086.017Equus_asinus_asinus
ENSXETG00000021448csde110086.017ENSECAG00000020885CSDE110086.017Equus_caballus
ENSXETG00000021448csde19283.761ENSEEUG00000006286CSDE16783.761Erinaceus_europaeus
ENSXETG00000021448csde110076.053ENSELUG00000015507csde110074.969Esox_lucius
ENSXETG00000021448csde110085.893ENSFCAG00000029266CSDE110082.272Felis_catus
ENSXETG00000021448csde110086.267ENSFALG00000003407CSDE110086.267Ficedula_albicollis
ENSXETG00000021448csde110085.518ENSFDAG00000007882CSDE110085.518Fukomys_damarensis
ENSXETG00000021448csde110077.958ENSFHEG00000010799csde110077.958Fundulus_heteroclitus
ENSXETG00000021448csde19977.556ENSGMOG00000012731csde110077.556Gadus_morhua
ENSXETG00000021448csde19885.751ENSGALG00000002139CSDE19885.751Gallus_gallus
ENSXETG00000021448csde19174.493ENSGAFG00000005241csde19574.493Gambusia_affinis
ENSXETG00000021448csde19978.207ENSGACG00000004544csde110078.207Gasterosteus_aculeatus
ENSXETG00000021448csde110087.141ENSGAGG00000017685CSDE110087.141Gopherus_agassizii
ENSXETG00000021448csde110086.017ENSGGOG00000002164CSDE110082.397Gorilla_gorilla
ENSXETG00000021448csde110076.952ENSHBUG00000020315csde110075.218Haplochromis_burtoni
ENSXETG00000021448csde19968.875ENSHGLG00000000650-9968.875Heterocephalus_glaber_female
ENSXETG00000021448csde110074.032ENSHGLG00000003829-10074.032Heterocephalus_glaber_female
ENSXETG00000021448csde19874.963ENSHGLG00000008555-9974.963Heterocephalus_glaber_female
ENSXETG00000021448csde19971.572ENSHGLG00000007471-9871.572Heterocephalus_glaber_female
ENSXETG00000021448csde110072.160ENSHGLG00000019549-10072.160Heterocephalus_glaber_female
ENSXETG00000021448csde19773.171ENSHGLG00000010039-10073.171Heterocephalus_glaber_female
ENSXETG00000021448csde19387.826ENSHGLG00000009620-10078.402Heterocephalus_glaber_female
ENSXETG00000021448csde110085.643ENSHGLG00100019438-10085.643Heterocephalus_glaber_male
ENSXETG00000021448csde110069.413ENSHGLG00100012072-10069.413Heterocephalus_glaber_male
ENSXETG00000021448csde19772.727ENSHGLG00100006910-10072.727Heterocephalus_glaber_male
ENSXETG00000021448csde19972.943ENSHGLG00100002245-9972.943Heterocephalus_glaber_male
ENSXETG00000021448csde110067.166ENSHGLG00100001846-10067.166Heterocephalus_glaber_male
ENSXETG00000021448csde19468.708ENSHGLG00100004195-10068.708Heterocephalus_glaber_male
ENSXETG00000021448csde19970.189ENSHGLG00100007287-9870.189Heterocephalus_glaber_male
ENSXETG00000021448csde19767.627ENSHGLG00100004833-9976.552Heterocephalus_glaber_male
ENSXETG00000021448csde110076.339ENSHCOG00000004158csde110073.848Hippocampus_comes
ENSXETG00000021448csde110074.410ENSIPUG00000000355csde110074.410Ictalurus_punctatus
ENSXETG00000021448csde18673.800ENSSTOG00000032722-9873.800Ictidomys_tridecemlineatus
ENSXETG00000021448csde110069.468ENSSTOG00000030994-10069.468Ictidomys_tridecemlineatus
ENSXETG00000021448csde110085.518ENSJJAG00000019571Csde110085.518Jaculus_jaculus
ENSXETG00000021448csde110077.104ENSKMAG00000005685csde110076.724Kryptolebias_marmoratus
ENSXETG00000021448csde110076.063ENSLBEG00000014770csde110075.373Labrus_bergylta
ENSXETG00000021448csde110080.395ENSLACG00000018452CSDE19480.395Latimeria_chalumnae
ENSXETG00000021448csde110081.796ENSLOCG00000010413csde19481.796Lepisosteus_oculatus
ENSXETG00000021448csde110082.022ENSLAFG00000007150CSDE19682.022Loxodonta_africana
ENSXETG00000021448csde110086.017ENSMFAG00000003674CSDE110082.397Macaca_fascicularis
ENSXETG00000021448csde110086.017ENSMMUG00000001974CSDE110082.397Macaca_mulatta
ENSXETG00000021448csde110086.017ENSMNEG00000045247CSDE19586.017Macaca_nemestrina
ENSXETG00000021448csde110085.768ENSMLEG00000038673CSDE19585.768Mandrillus_leucophaeus
ENSXETG00000021448csde110077.278ENSMAMG00000008821csde110076.493Mastacembelus_armatus
ENSXETG00000021448csde110077.709ENSMZEG00005021675csde110075.218Maylandia_zebra
ENSXETG00000021448csde19886.132ENSMGAG00000016381CSDE19886.132Meleagris_gallopavo
ENSXETG00000021448csde110085.144ENSMAUG00000014031Csde110085.144Mesocricetus_auratus
ENSXETG00000021448csde110085.393ENSMICG00000002050CSDE19585.393Microcebus_murinus
ENSXETG00000021448csde110085.144ENSMOCG00000018960Csde110085.144Microtus_ochrogaster
ENSXETG00000021448csde110075.995ENSMMOG00000015075csde110075.995Mola_mola
ENSXETG00000021448csde110087.765ENSMODG00000004685CSDE110087.765Monodelphis_domestica
ENSXETG00000021448csde110075.995ENSMALG00000007132csde110075.995Monopterus_albus
ENSXETG00000021448csde110085.268MGP_CAROLIEiJ_G0025444Csde19790.476Mus_caroli
ENSXETG00000021448csde110085.518ENSMUSG00000068823Csde19790.476Mus_musculus
ENSXETG00000021448csde110085.268MGP_PahariEiJ_G0026888Csde19790.476Mus_pahari
ENSXETG00000021448csde110085.268MGP_SPRETEiJ_G0026394Csde19790.476Mus_spretus
ENSXETG00000021448csde19885.732ENSMPUG00000005753CSDE19985.732Mustela_putorius_furo
ENSXETG00000021448csde110081.773ENSMLUG00000005681CSDE19481.773Myotis_lucifugus
ENSXETG00000021448csde19756.416ENSNGAG00000012599-10056.416Nannospalax_galili
ENSXETG00000021448csde110085.144ENSNGAG00000021929Csde110085.144Nannospalax_galili
ENSXETG00000021448csde110075.218ENSNBRG00000020808csde110075.218Neolamprologus_brichardi
ENSXETG00000021448csde110085.893ENSNLEG00000004842CSDE19585.893Nomascus_leucogenys
ENSXETG00000021448csde19896.117ENSMEUG00000002677CSDE19596.117Notamacropus_eugenii
ENSXETG00000021448csde19895.146ENSOPRG00000005002CSDE17695.146Ochotona_princeps
ENSXETG00000021448csde19757.930ENSODEG00000005979-9864.211Octodon_degus
ENSXETG00000021448csde110085.518ENSODEG00000007383-10085.518Octodon_degus
ENSXETG00000021448csde110075.912ENSONIG00000009309csde110075.912Oreochromis_niloticus
ENSXETG00000021448csde19888.196ENSOANG00000003346-8288.196Ornithorhynchus_anatinus
ENSXETG00000021448csde110085.768ENSOCUG00000016438CSDE19585.768Oryctolagus_cuniculus
ENSXETG00000021448csde110075.669ENSORLG00000000707csde110075.669Oryzias_latipes
ENSXETG00000021448csde110077.460ENSORLG00020005148csde110075.669Oryzias_latipes_hni
ENSXETG00000021448csde110077.709ENSORLG00015019415csde110075.912Oryzias_latipes_hsok
ENSXETG00000021448csde110077.612ENSOMEG00000015656csde110075.820Oryzias_melastigma
ENSXETG00000021448csde110082.397ENSOGAG00000012127CSDE19482.397Otolemur_garnettii
ENSXETG00000021448csde110082.147ENSOARG00000020034CSDE19482.147Ovis_aries
ENSXETG00000021448csde110086.017ENSPPAG00000025861CSDE110082.397Pan_paniscus
ENSXETG00000021448csde110085.893ENSPPRG00000006747CSDE19585.893Panthera_pardus
ENSXETG00000021448csde110085.893ENSPTIG00000015468CSDE110085.893Panthera_tigris_altaica
ENSXETG00000021448csde110086.017ENSPTRG00000033721CSDE110086.017Pan_troglodytes
ENSXETG00000021448csde110086.017ENSPANG00000018873CSDE110082.397Papio_anubis
ENSXETG00000021448csde110075.592ENSPKIG00000009459csde110075.592Paramormyrops_kingsleyae
ENSXETG00000021448csde19692.274ENSPSIG00000003823CSDE19692.274Pelodiscus_sinensis
ENSXETG00000021448csde110075.124ENSPMGG00000000772csde110075.124Periophthalmus_magnuspinnatus
ENSXETG00000021448csde110085.393ENSPEMG00000020357-10085.393Peromyscus_maniculatus_bairdii
ENSXETG00000021448csde110087.516ENSPCIG00000022587CSDE110087.516Phascolarctos_cinereus
ENSXETG00000021448csde19876.352ENSPFOG00000012664csde110076.816Poecilia_formosa
ENSXETG00000021448csde19672.171ENSPLAG00000017680csde19372.171Poecilia_latipinna
ENSXETG00000021448csde19772.205ENSPMEG00000005094csde19672.205Poecilia_mexicana
ENSXETG00000021448csde110077.076ENSPREG00000011631csde110076.608Poecilia_reticulata
ENSXETG00000021448csde110085.893ENSPPYG00000000996CSDE110085.893Pongo_abelii
ENSXETG00000021448csde110095.146ENSPCAG00000014368CSDE19095.146Procavia_capensis
ENSXETG00000021448csde19077.695ENSPCOG00000008223-9077.695Propithecus_coquereli
ENSXETG00000021448csde110085.643ENSPCOG00000017893CSDE110085.643Propithecus_coquereli
ENSXETG00000021448csde110077.403ENSPVAG00000008225CSDE19577.403Pteropus_vampyrus
ENSXETG00000021448csde110076.952ENSPNYG00000013745csde110075.218Pundamilia_nyererei
ENSXETG00000021448csde110078.358ENSPNAG00000001958csde110075.622Pygocentrus_nattereri
ENSXETG00000021448csde110085.144ENSRNOG00000061058Csde110085.144Rattus_norvegicus
ENSXETG00000021448csde110080.923ENSRBIG00000038966-9480.923Rhinopithecus_bieti
ENSXETG00000021448csde110082.896ENSRBIG00000038088-9981.854Rhinopithecus_bieti
ENSXETG00000021448csde110086.017ENSRROG00000043101CSDE19586.017Rhinopithecus_roxellana
ENSXETG00000021448csde110085.893ENSSBOG00000035592CSDE19585.893Saimiri_boliviensis_boliviensis
ENSXETG00000021448csde110083.770ENSSHAG00000009831CSDE110083.770Sarcophilus_harrisii
ENSXETG00000021448csde110076.980ENSSFOG00015007498csde110077.228Scleropages_formosus
ENSXETG00000021448csde110076.549ENSSMAG00000007203csde110076.549Scophthalmus_maximus
ENSXETG00000021448csde110076.914ENSSDUG00000015380csde110076.244Seriola_dumerili
ENSXETG00000021448csde110078.731ENSSLDG00000008819csde110078.731Seriola_lalandi_dorsalis
ENSXETG00000021448csde110081.898ENSSARG00000000738CSDE19481.898Sorex_araneus
ENSXETG00000021448csde110086.517ENSSPUG00000008714CSDE110086.517Sphenodon_punctatus
ENSXETG00000021448csde110078.109ENSSPAG00000000716csde110075.622Stegastes_partitus
ENSXETG00000021448csde110086.142ENSSSCG00000006752CSDE110082.522Sus_scrofa
ENSXETG00000021448csde110085.554ENSTGUG00000000972CSDE110085.554Taeniopygia_guttata
ENSXETG00000021448csde110073.225ENSTRUG00000007996csde110073.225Takifugu_rubripes
ENSXETG00000021448csde19382.955ENSTNIG00000010878csde110082.955Tetraodon_nigroviridis
ENSXETG00000021448csde19392.308ENSTBEG00000011880-6092.308Tupaia_belangeri
ENSXETG00000021448csde110081.898ENSTTRG00000015583CSDE19481.898Tursiops_truncatus
ENSXETG00000021448csde18976.641ENSUAMG00000024289-9976.641Ursus_americanus
ENSXETG00000021448csde19090.879ENSUAMG00000021779-9890.879Ursus_americanus
ENSXETG00000021448csde19779.433ENSUMAG00000011714-9979.433Ursus_maritimus
ENSXETG00000021448csde110076.030ENSUMAG00000009720-9776.030Ursus_maritimus
ENSXETG00000021448csde110084.130ENSVPAG00000000749CSDE17984.130Vicugna_pacos
ENSXETG00000021448csde19185.444ENSVVUG00000009890CSDE19485.444Vulpes_vulpes
ENSXETG00000021448csde19277.236ENSXCOG00000000035csde19967.683Xiphophorus_couchianus
ENSXETG00000021448csde110077.958ENSXMAG00000009080csde110075.787Xiphophorus_maculatus

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