EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000021460 (Gene tree)
Gene ID: -
Gene Symbol: srek1
Alias: -
Full Name: splicing regulatory glutamic acid/lysine-rich protein 1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 21358 bases
Position: chrGL172723.1:1097296-1118653
Accession: XB-GENE-491758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000046396	RRM_1	PF00076.22	2.3e-21	1	2
ENSXETP00000046396	RRM_1	PF00076.22	2.3e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000046396	-	1494	-	ENSXETP00000046396	498 (aa)	-	F6RE32

Gene Model

Click here to download ENSXETG00000021460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000021460's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000021460	srek1	60	42.193	ENSG00000116754	SRSF11	68	67.816	Homo_sapiens
ENSXETG00000021460	srek1	76	66.351	ENSG00000153914	SREK1	81	92.593	Homo_sapiens
ENSXETG00000021460	srek1	51	65.882	ENSAPOG00000023618	srek1	50	67.265	Acanthochromis_polyacanthus
ENSXETG00000021460	srek1	75	65.952	ENSAMEG00000011327	SREK1	94	53.360	Ailuropoda_melanoleuca
ENSXETG00000021460	srek1	51	66.148	ENSAOCG00000024379	srek1	50	67.265	Amphiprion_ocellaris
ENSXETG00000021460	srek1	60	41.196	ENSATEG00000007534	-	77	68.675	Anabas_testudineus
ENSXETG00000021460	srek1	64	54.444	ENSATEG00000009450	srek1	50	67.421	Anabas_testudineus
ENSXETG00000021460	srek1	83	68.990	ENSAPLG00000003948	-	72	77.419	Anas_platyrhynchos
ENSXETG00000021460	srek1	60	43.522	ENSACAG00000013654	SRSF11	81	39.630	Anolis_carolinensis
ENSXETG00000021460	srek1	80	64.350	ENSANAG00000031358	SREK1	81	92.593	Aotus_nancymaae
ENSXETG00000021460	srek1	61	74.342	ENSACLG00000026754	srek1	96	74.013	Astatotilapia_calliptera
ENSXETG00000021460	srek1	61	75.000	ENSAMXG00000043877	srek1	58	75.658	Astyanax_mexicanus
ENSXETG00000021460	srek1	79	70.047	ENSBTAG00000007321	SREK1	81	92.593	Bos_taurus
ENSXETG00000021460	srek1	62	42.395	ENSCJAG00000017704	SRSF11	52	42.581	Callithrix_jacchus
ENSXETG00000021460	srek1	80	64.350	ENSCJAG00000015950	SREK1	81	92.593	Callithrix_jacchus
ENSXETG00000021460	srek1	76	68.932	ENSCAFG00000007560	SREK1	90	53.862	Canis_familiaris
ENSXETG00000021460	srek1	60	43.000	ENSCHIG00000025295	SRSF11	70	68.675	Capra_hircus
ENSXETG00000021460	srek1	60	40.333	ENSTSYG00000033270	-	72	63.725	Carlito_syrichta
ENSXETG00000021460	srek1	79	69.668	ENSTSYG00000036957	SREK1	81	92.593	Carlito_syrichta
ENSXETG00000021460	srek1	72	76.045	ENSCPOG00000008925	SREK1	85	67.689	Cavia_porcellus
ENSXETG00000021460	srek1	72	76.323	ENSCCAG00000020591	SREK1	81	92.593	Cebus_capucinus
ENSXETG00000021460	srek1	79	70.075	ENSCATG00000031482	SREK1	81	92.593	Cercocebus_atys
ENSXETG00000021460	srek1	73	69.949	ENSCLAG00000005024	SREK1	86	64.273	Chinchilla_lanigera
ENSXETG00000021460	srek1	62	69.707	ENSCHOG00000004956	SREK1	50	69.156	Choloepus_hoffmanni
ENSXETG00000021460	srek1	62	76.052	ENSCPBG00000026866	SREK1	86	77.670	Chrysemys_picta_bellii
ENSXETG00000021460	srek1	60	47.869	ENSCING00000022892	-	70	46.230	Ciona_intestinalis
ENSXETG00000021460	srek1	79	70.075	ENSCANG00000030421	SREK1	81	92.593	Colobus_angolensis_palliatus
ENSXETG00000021460	srek1	98	63.620	ENSCGRG00001015222	-	87	62.888	Cricetulus_griseus_chok1gshd
ENSXETG00000021460	srek1	98	63.620	ENSCGRG00000002130	-	87	62.888	Cricetulus_griseus_crigri
ENSXETG00000021460	srek1	99	59.155	ENSDARG00000009764	srek1	55	75.570	Danio_rerio
ENSXETG00000021460	srek1	75	65.952	ENSDNOG00000010327	SREK1	62	73.529	Dasypus_novemcinctus
ENSXETG00000021460	srek1	62	39.355	FBgn0024285	Srp54	54	38.095	Drosophila_melanogaster
ENSXETG00000021460	srek1	72	65.181	ENSETEG00000012977	SREK1	63	64.128	Echinops_telfairi
ENSXETG00000021460	srek1	60	41.137	ENSEASG00005007847	SRSF11	76	66.667	Equus_asinus_asinus
ENSXETG00000021460	srek1	94	62.316	ENSELUG00000008230	srek1	55	76.052	Esox_lucius
ENSXETG00000021460	srek1	73	74.380	ENSFALG00000009835	SREK1	58	72.439	Ficedula_albicollis
ENSXETG00000021460	srek1	79	69.393	ENSFDAG00000017844	SREK1	64	73.253	Fukomys_damarensis
ENSXETG00000021460	srek1	60	39.333	ENSFHEG00000003732	SRSF11	57	40.390	Fundulus_heteroclitus
ENSXETG00000021460	srek1	52	74.131	ENSGALG00000043541	SREK1	84	90.361	Gallus_gallus
ENSXETG00000021460	srek1	80	70.426	ENSGAGG00000006087	SREK1	72	80.851	Gopherus_agassizii
ENSXETG00000021460	srek1	75	65.684	ENSGGOG00000004737	SREK1	81	92.593	Gorilla_gorilla
ENSXETG00000021460	srek1	83	66.231	ENSHGLG00000001181	SREK1	86	63.619	Heterocephalus_glaber_female
ENSXETG00000021460	srek1	60	42.525	ENSHGLG00000008682	SRSF11	67	40.089	Heterocephalus_glaber_female
ENSXETG00000021460	srek1	60	42.475	ENSHGLG00100018382	SRSF11	70	40.136	Heterocephalus_glaber_male
ENSXETG00000021460	srek1	79	73.552	ENSHGLG00100003207	SREK1	86	64.444	Heterocephalus_glaber_male
ENSXETG00000021460	srek1	53	58.712	ENSHCOG00000017240	SREK1	53	69.000	Hippocampus_comes
ENSXETG00000021460	srek1	94	57.203	ENSIPUG00000016851	srek1	54	70.957	Ictalurus_punctatus
ENSXETG00000021460	srek1	83	62.447	ENSSTOG00000008850	SREK1	81	92.593	Ictidomys_tridecemlineatus
ENSXETG00000021460	srek1	62	42.581	ENSLAFG00000015882	SRSF11	77	39.959	Loxodonta_africana
ENSXETG00000021460	srek1	98	63.771	ENSLAFG00000013853	SREK1	97	55.457	Loxodonta_africana
ENSXETG00000021460	srek1	79	70.075	ENSMFAG00000039823	SREK1	81	92.593	Macaca_fascicularis
ENSXETG00000021460	srek1	76	66.194	ENSMMUG00000014586	SREK1	75	92.683	Macaca_mulatta
ENSXETG00000021460	srek1	79	70.075	ENSMNEG00000030723	SREK1	81	92.593	Macaca_nemestrina
ENSXETG00000021460	srek1	79	70.075	ENSMLEG00000039078	SREK1	81	92.593	Mandrillus_leucophaeus
ENSXETG00000021460	srek1	60	41.806	ENSMAMG00000015002	-	78	68.675	Mastacembelus_armatus
ENSXETG00000021460	srek1	81	65.826	ENSMAUG00000010066	-	91	67.857	Mesocricetus_auratus
ENSXETG00000021460	srek1	81	67.574	ENSMICG00000034959	SREK1	81	92.593	Microcebus_murinus
ENSXETG00000021460	srek1	98	63.620	ENSMOCG00000001536	-	92	67.628	Microtus_ochrogaster
ENSXETG00000021460	srek1	98	61.566	ENSMODG00000019665	SREK1	86	62.226	Monodelphis_domestica
ENSXETG00000021460	srek1	82	58.278	ENSMALG00000017086	srek1	93	85.714	Monopterus_albus
ENSXETG00000021460	srek1	82	65.443	ENSMPUG00000014736	SREK1	62	73.710	Mustela_putorius_furo
ENSXETG00000021460	srek1	60	42.193	ENSMLUG00000026338	-	79	40.241	Myotis_lucifugus
ENSXETG00000021460	srek1	79	70.075	ENSNLEG00000003827	SREK1	81	92.593	Nomascus_leucogenys
ENSXETG00000021460	srek1	98	62.132	ENSOPRG00000012111	SREK1	70	64.828	Ochotona_princeps
ENSXETG00000021460	srek1	61	75.000	ENSONIG00000011080	srek1	66	74.837	Oreochromis_niloticus
ENSXETG00000021460	srek1	76	60.317	ENSOANG00000005029	SREK1	98	61.803	Ornithorhynchus_anatinus
ENSXETG00000021460	srek1	61	42.244	ENSOCUG00000024114	-	68	38.725	Oryctolagus_cuniculus
ENSXETG00000021460	srek1	98	63.604	ENSOCUG00000001319	SREK1	62	73.284	Oryctolagus_cuniculus
ENSXETG00000021460	srek1	61	63.816	ENSOMEG00000015817	srek1	56	62.500	Oryzias_melastigma
ENSXETG00000021460	srek1	59	59.226	ENSOGAG00000016463	SREK1	58	65.714	Otolemur_garnettii
ENSXETG00000021460	srek1	79	70.047	ENSOARG00000006005	SREK1	61	73.529	Ovis_aries
ENSXETG00000021460	srek1	79	70.075	ENSPPAG00000031605	SREK1	75	92.683	Pan_paniscus
ENSXETG00000021460	srek1	98	62.210	ENSPPRG00000024617	SREK1	81	90.123	Panthera_pardus
ENSXETG00000021460	srek1	69	68.120	ENSPTIG00000006608	SREK1	81	90.123	Panthera_tigris_altaica
ENSXETG00000021460	srek1	79	70.075	ENSPTRG00000016936	SREK1	81	92.593	Pan_troglodytes
ENSXETG00000021460	srek1	79	70.075	ENSPANG00000008953	SREK1	81	92.593	Papio_anubis
ENSXETG00000021460	srek1	84	66.825	ENSPKIG00000025563	srek1	55	74.351	Paramormyrops_kingsleyae
ENSXETG00000021460	srek1	98	62.662	ENSPEMG00000024051	-	94	67.628	Peromyscus_maniculatus_bairdii
ENSXETG00000021460	srek1	76	66.194	ENSPPYG00000015515	SREK1	62	73.284	Pongo_abelii
ENSXETG00000021460	srek1	64	70.807	ENSPCAG00000004955	SREK1	62	68.254	Procavia_capensis
ENSXETG00000021460	srek1	81	67.574	ENSPCOG00000026230	SREK1	81	92.593	Propithecus_coquereli
ENSXETG00000021460	srek1	98	57.884	ENSPNAG00000004328	srek1	57	73.616	Pygocentrus_nattereri
ENSXETG00000021460	srek1	72	76.323	ENSRBIG00000033818	SREK1	81	92.593	Rhinopithecus_bieti
ENSXETG00000021460	srek1	60	42.193	ENSRBIG00000042971	SRSF11	64	68.675	Rhinopithecus_bieti
ENSXETG00000021460	srek1	79	70.075	ENSRROG00000017210	SREK1	81	92.593	Rhinopithecus_roxellana
ENSXETG00000021460	srek1	80	64.350	ENSSBOG00000031230	SREK1	81	92.593	Saimiri_boliviensis_boliviensis
ENSXETG00000021460	srek1	60	42.193	ENSSBOG00000033461	SRSF11	64	68.675	Saimiri_boliviensis_boliviensis
ENSXETG00000021460	srek1	64	54.354	ENSSHAG00000003514	SREK1	86	56.889	Sarcophilus_harrisii
ENSXETG00000021460	srek1	84	65.714	ENSSFOG00015004995	srek1	53	74.675	Scleropages_formosus
ENSXETG00000021460	srek1	82	56.550	ENSSMAG00000011808	srek1	59	73.616	Scophthalmus_maximus
ENSXETG00000021460	srek1	73	76.567	ENSSARG00000000795	SREK1	54	76.323	Sorex_araneus
ENSXETG00000021460	srek1	60	80.399	ENSSPUG00000016553	SREK1	90	79.734	Sphenodon_punctatus
ENSXETG00000021460	srek1	60	58.187	ENSTGUG00000002935	SREK1	56	67.105	Taeniopygia_guttata
ENSXETG00000021460	srek1	83	60.789	ENSTNIG00000013463	srek1	69	74.257	Tetraodon_nigroviridis
ENSXETG00000021460	srek1	71	68.312	ENSTTRG00000009684	SREK1	61	71.968	Tursiops_truncatus
ENSXETG00000021460	srek1	60	42.525	ENSUMAG00000006618	SRSF11	76	40.089	Ursus_maritimus
ENSXETG00000021460	srek1	75	65.952	ENSUMAG00000008191	SREK1	63	72.705	Ursus_maritimus
ENSXETG00000021460	srek1	68	67.200	ENSVPAG00000008654	SREK1	61	71.968	Vicugna_pacos