EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000021517 (Gene tree)
Gene ID: -
Gene Symbol: ythdc2
Alias: -
Full Name: YTH domain containing 2
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 37359 bases
Position: chrGL172846.1:1428000-1465358
Accession: XB-GENE-5881731
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000046516	R3H	PF01424.22	1.4e-13	1	1
ENSXETP00000046513	R3H	PF01424.22	5.5e-12	1	1
ENSXETP00000046513	DEAD	PF00270.29	1.9e-07	1	1
ENSXETP00000046513	YTH	PF04146.15	2.5e-44	1	1
ENSXETP00000046513	HA2	PF04408.23	1.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000046513	-	4281	-	ENSXETP00000046513	1427 (aa)	-	F6TPR8
ENSXETT00000046516	-	2187	-	ENSXETP00000046516	729 (aa)	-	F6TPQ1

Gene Model

Click here to download ENSXETG00000021517's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000021517's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000021517	ythdc2	54	38.813	ENSXETG00000000367	dhx29	54	38.813
ENSXETG00000021517	ythdc2	51	30.435	ENSXETG00000012145	dhx35	77	30.867
ENSXETG00000021517	ythdc2	56	39.904	ENSXETG00000012515	dhx9	64	34.870
ENSXETG00000021517	ythdc2	50	43.541	ENSXETG00000031949	DHX57	56	43.541
ENSXETG00000021517	ythdc2	63	42.268	ENSXETG00000007768	dhx36	81	35.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000021517	ythdc2	100	77.623	ENSG00000047188	YTHDC2	100	78.666	Homo_sapiens
ENSXETG00000021517	ythdc2	71	60.742	ENSAPOG00000013442	YTHDC2	96	60.954	Acanthochromis_polyacanthus
ENSXETG00000021517	ythdc2	98	78.531	ENSAMEG00000006598	YTHDC2	98	79.347	Ailuropoda_melanoleuca
ENSXETG00000021517	ythdc2	97	58.537	ENSACIG00000012809	YTHDC2	99	58.675	Amphilophus_citrinellus
ENSXETG00000021517	ythdc2	87	62.712	ENSAOCG00000018480	YTHDC2	99	70.629	Amphiprion_ocellaris
ENSXETG00000021517	ythdc2	95	62.857	ENSAPEG00000014873	YTHDC2	99	70.629	Amphiprion_percula
ENSXETG00000021517	ythdc2	98	58.559	ENSATEG00000010847	YTHDC2	98	58.488	Anabas_testudineus
ENSXETG00000021517	ythdc2	100	76.158	ENSACAG00000007754	YTHDC2	100	76.503	Anolis_carolinensis
ENSXETG00000021517	ythdc2	100	75.848	ENSANAG00000022177	YTHDC2	99	76.446	Aotus_nancymaae
ENSXETG00000021517	ythdc2	99	57.935	ENSACLG00000019069	YTHDC2	99	58.010	Astatotilapia_calliptera
ENSXETG00000021517	ythdc2	99	66.130	ENSAMXG00000008735	YTHDC2	99	66.130	Astyanax_mexicanus
ENSXETG00000021517	ythdc2	100	78.318	ENSBTAG00000014099	YTHDC2	100	79.273	Bos_taurus
ENSXETG00000021517	ythdc2	100	75.174	ENSCJAG00000016598	YTHDC2	100	76.217	Callithrix_jacchus
ENSXETG00000021517	ythdc2	97	78.409	ENSCAFG00000000224	YTHDC2	99	80.938	Canis_familiaris
ENSXETG00000021517	ythdc2	100	77.987	ENSCAFG00020003668	YTHDC2	100	78.966	Canis_lupus_dingo
ENSXETG00000021517	ythdc2	100	78.388	ENSCHIG00000026651	YTHDC2	100	78.666	Capra_hircus
ENSXETG00000021517	ythdc2	97	78.520	ENSTSYG00000009634	YTHDC2	99	79.310	Carlito_syrichta
ENSXETG00000021517	ythdc2	93	59.914	ENSCAPG00000015691	YTHDC2	94	60.262	Cavia_aperea
ENSXETG00000021517	ythdc2	98	78.704	ENSCPOG00000000272	YTHDC2	100	77.961	Cavia_porcellus
ENSXETG00000021517	ythdc2	100	77.431	ENSCCAG00000037613	YTHDC2	100	78.333	Cebus_capucinus
ENSXETG00000021517	ythdc2	100	77.554	ENSCATG00000031670	YTHDC2	100	78.596	Cercocebus_atys
ENSXETG00000021517	ythdc2	100	76.738	ENSCLAG00000014076	YTHDC2	100	77.435	Chinchilla_lanigera
ENSXETG00000021517	ythdc2	100	77.623	ENSCSAG00000014899	YTHDC2	100	78.805	Chlorocebus_sabaeus
ENSXETG00000021517	ythdc2	92	70.326	ENSCHOG00000013323	YTHDC2	86	78.282	Choloepus_hoffmanni
ENSXETG00000021517	ythdc2	98	79.030	ENSCPBG00000013876	YTHDC2	100	78.373	Chrysemys_picta_bellii
ENSXETG00000021517	ythdc2	100	77.307	ENSCANG00000025759	YTHDC2	100	78.348	Colobus_angolensis_palliatus
ENSXETG00000021517	ythdc2	98	78.977	ENSCGRG00001021338	Ythdc2	100	78.641	Cricetulus_griseus_chok1gshd
ENSXETG00000021517	ythdc2	98	78.125	ENSCGRG00000010336	Ythdc2	100	77.809	Cricetulus_griseus_crigri
ENSXETG00000021517	ythdc2	96	42.390	ENSCSEG00000017911	YTHDC2	98	47.679	Cynoglossus_semilaevis
ENSXETG00000021517	ythdc2	98	56.042	ENSCVAG00000021377	YTHDC2	99	55.673	Cyprinodon_variegatus
ENSXETG00000021517	ythdc2	98	57.603	ENSDARG00000103525	YTHDC2	98	57.472	Danio_rerio
ENSXETG00000021517	ythdc2	100	76.255	ENSDNOG00000012198	YTHDC2	100	76.683	Dasypus_novemcinctus
ENSXETG00000021517	ythdc2	96	76.218	ENSDORG00000007057	Ythdc2	96	76.218	Dipodomys_ordii
ENSXETG00000021517	ythdc2	70	37.584	FBgn0030833	CG8915	82	31.470	Drosophila_melanogaster
ENSXETG00000021517	ythdc2	96	68.182	ENSETEG00000013681	YTHDC2	88	68.944	Echinops_telfairi
ENSXETG00000021517	ythdc2	91	46.788	ENSEBUG00000014315	-	86	51.463	Eptatretus_burgeri
ENSXETG00000021517	ythdc2	100	78.116	ENSEASG00005015135	YTHDC2	100	78.324	Equus_asinus_asinus
ENSXETG00000021517	ythdc2	100	78.101	ENSECAG00000020630	YTHDC2	99	82.955	Equus_caballus
ENSXETG00000021517	ythdc2	85	83.217	ENSEEUG00000008580	YTHDC2	86	83.217	Erinaceus_europaeus
ENSXETG00000021517	ythdc2	99	67.077	ENSELUG00000015902	YTHDC2	99	67.077	Esox_lucius
ENSXETG00000021517	ythdc2	98	78.592	ENSFCAG00000031967	YTHDC2	99	80.682	Felis_catus
ENSXETG00000021517	ythdc2	92	73.936	ENSFALG00000002623	-	99	73.936	Ficedula_albicollis
ENSXETG00000021517	ythdc2	96	71.574	ENSFALG00000000040	-	99	71.834	Ficedula_albicollis
ENSXETG00000021517	ythdc2	98	78.378	ENSFDAG00000008701	YTHDC2	100	79.232	Fukomys_damarensis
ENSXETG00000021517	ythdc2	99	56.452	ENSFHEG00000009312	YTHDC2	99	56.171	Fundulus_heteroclitus
ENSXETG00000021517	ythdc2	97	72.504	ENSGALG00000000189	YTHDC2	99	72.467	Gallus_gallus
ENSXETG00000021517	ythdc2	86	65.823	ENSGAFG00000008158	YTHDC2	94	65.823	Gambusia_affinis
ENSXETG00000021517	ythdc2	53	76.724	ENSGACG00000018569	YTHDC2	98	70.925	Gasterosteus_aculeatus
ENSXETG00000021517	ythdc2	96	78.863	ENSGAGG00000010063	YTHDC2	100	79.185	Gopherus_agassizii
ENSXETG00000021517	ythdc2	100	77.693	ENSGGOG00000014407	YTHDC2	100	78.735	Gorilla_gorilla
ENSXETG00000021517	ythdc2	96	56.676	ENSHBUG00000007492	YTHDC2	92	60.567	Haplochromis_burtoni
ENSXETG00000021517	ythdc2	100	77.755	ENSHGLG00000019014	YTHDC2	100	77.693	Heterocephalus_glaber_female
ENSXETG00000021517	ythdc2	100	77.755	ENSHGLG00100008192	YTHDC2	100	77.693	Heterocephalus_glaber_male
ENSXETG00000021517	ythdc2	91	67.857	ENSHCOG00000014281	YTHDC2	96	67.857	Hippocampus_comes
ENSXETG00000021517	ythdc2	100	65.348	ENSIPUG00000019561	ythdc2	98	66.199	Ictalurus_punctatus
ENSXETG00000021517	ythdc2	100	75.674	ENSSTOG00000013239	YTHDC2	100	76.710	Ictidomys_tridecemlineatus
ENSXETG00000021517	ythdc2	97	78.754	ENSJJAG00000017908	Ythdc2	100	75.551	Jaculus_jaculus
ENSXETG00000021517	ythdc2	98	57.316	ENSKMAG00000015969	YTHDC2	98	57.418	Kryptolebias_marmoratus
ENSXETG00000021517	ythdc2	98	58.714	ENSLBEG00000027926	YTHDC2	98	57.470	Labrus_bergylta
ENSXETG00000021517	ythdc2	99	76.050	ENSLACG00000010991	YTHDC2	99	76.050	Latimeria_chalumnae
ENSXETG00000021517	ythdc2	99	68.898	ENSLOCG00000009001	YTHDC2	99	68.898	Lepisosteus_oculatus
ENSXETG00000021517	ythdc2	100	77.384	ENSLAFG00000003538	YTHDC2	100	79.625	Loxodonta_africana
ENSXETG00000021517	ythdc2	100	77.623	ENSMNEG00000040900	YTHDC2	100	78.666	Macaca_nemestrina
ENSXETG00000021517	ythdc2	100	77.762	ENSMLEG00000043185	YTHDC2	100	78.805	Mandrillus_leucophaeus
ENSXETG00000021517	ythdc2	98	59.873	ENSMAMG00000019193	YTHDC2	98	60.014	Mastacembelus_armatus
ENSXETG00000021517	ythdc2	93	73.485	ENSMZEG00005009153	YTHDC2	99	71.127	Maylandia_zebra
ENSXETG00000021517	ythdc2	97	64.781	ENSMGAG00000006674	YTHDC2	100	68.305	Meleagris_gallopavo
ENSXETG00000021517	ythdc2	98	78.906	ENSMAUG00000016179	Ythdc2	100	78.099	Mesocricetus_auratus
ENSXETG00000021517	ythdc2	100	77.593	ENSMICG00000004030	YTHDC2	99	82.955	Microcebus_murinus
ENSXETG00000021517	ythdc2	100	77.562	ENSMOCG00000011740	Ythdc2	100	78.463	Microtus_ochrogaster
ENSXETG00000021517	ythdc2	93	55.670	ENSMMOG00000011758	YTHDC2	92	58.603	Mola_mola
ENSXETG00000021517	ythdc2	100	77.793	ENSMODG00000015671	YTHDC2	100	78.097	Monodelphis_domestica
ENSXETG00000021517	ythdc2	97	57.589	ENSMALG00000002782	YTHDC2	94	60.763	Monopterus_albus
ENSXETG00000021517	ythdc2	100	77.029	MGP_CAROLIEiJ_G0022248	Ythdc2	97	85.263	Mus_caroli
ENSXETG00000021517	ythdc2	100	77.029	ENSMUSG00000034653	Ythdc2	97	85.263	Mus_musculus
ENSXETG00000021517	ythdc2	100	76.955	MGP_PahariEiJ_G0018981	Ythdc2	97	85.439	Mus_pahari
ENSXETG00000021517	ythdc2	98	78.835	MGP_SPRETEiJ_G0023159	Ythdc2	97	85.263	Mus_spretus
ENSXETG00000021517	ythdc2	96	78.634	ENSMPUG00000000755	YTHDC2	99	79.433	Mustela_putorius_furo
ENSXETG00000021517	ythdc2	100	77.172	ENSMLUG00000006106	YTHDC2	100	77.379	Myotis_lucifugus
ENSXETG00000021517	ythdc2	100	78.243	ENSNGAG00000017798	Ythdc2	100	78.691	Nannospalax_galili
ENSXETG00000021517	ythdc2	100	55.753	ENSNBRG00000000762	YTHDC2	97	55.682	Neolamprologus_brichardi
ENSXETG00000021517	ythdc2	100	77.276	ENSNLEG00000011648	YTHDC2	100	78.388	Nomascus_leucogenys
ENSXETG00000021517	ythdc2	72	81.884	ENSMEUG00000004414	YTHDC2	72	81.884	Notamacropus_eugenii
ENSXETG00000021517	ythdc2	87	85.714	ENSOPRG00000000462	YTHDC2	78	91.176	Ochotona_princeps
ENSXETG00000021517	ythdc2	100	77.254	ENSODEG00000007804	YTHDC2	100	78.086	Octodon_degus
ENSXETG00000021517	ythdc2	98	59.091	ENSONIG00000011601	YTHDC2	99	59.062	Oreochromis_niloticus
ENSXETG00000021517	ythdc2	85	59.271	ENSOANG00000011143	-	99	59.271	Ornithorhynchus_anatinus
ENSXETG00000021517	ythdc2	96	78.821	ENSOCUG00000012096	YTHDC2	100	79.694	Oryctolagus_cuniculus
ENSXETG00000021517	ythdc2	72	72.932	ENSORLG00000019098	YTHDC2	85	72.932	Oryzias_latipes
ENSXETG00000021517	ythdc2	98	51.731	ENSORLG00015000390	YTHDC2	98	51.166	Oryzias_latipes_hsok
ENSXETG00000021517	ythdc2	98	52.677	ENSOMEG00000014221	YTHDC2	98	52.790	Oryzias_melastigma
ENSXETG00000021517	ythdc2	98	78.891	ENSOGAG00000001618	YTHDC2	100	78.547	Otolemur_garnettii
ENSXETG00000021517	ythdc2	98	78.454	ENSOARG00000016223	YTHDC2	100	76.289	Ovis_aries
ENSXETG00000021517	ythdc2	100	77.623	ENSPPAG00000018854	YTHDC2	100	78.666	Pan_paniscus
ENSXETG00000021517	ythdc2	98	78.592	ENSPPRG00000001595	YTHDC2	100	78.497	Panthera_pardus
ENSXETG00000021517	ythdc2	96	78.384	ENSPTIG00000021801	YTHDC2	96	79.039	Panthera_tigris_altaica
ENSXETG00000021517	ythdc2	100	77.693	ENSPTRG00000017143	YTHDC2	100	78.735	Pan_troglodytes
ENSXETG00000021517	ythdc2	100	76.119	ENSPANG00000024470	YTHDC2	100	75.956	Papio_anubis
ENSXETG00000021517	ythdc2	99	65.537	ENSPKIG00000016010	YTHDC2	99	65.490	Paramormyrops_kingsleyae
ENSXETG00000021517	ythdc2	96	78.530	ENSPSIG00000014798	YTHDC2	100	79.403	Pelodiscus_sinensis
ENSXETG00000021517	ythdc2	98	53.675	ENSPMGG00000020677	YTHDC2	99	53.984	Periophthalmus_magnuspinnatus
ENSXETG00000021517	ythdc2	100	77.113	ENSPEMG00000018062	Ythdc2	100	77.869	Peromyscus_maniculatus_bairdii
ENSXETG00000021517	ythdc2	99	58.258	ENSPMAG00000003218	-	100	58.188	Petromyzon_marinus
ENSXETG00000021517	ythdc2	100	78.984	ENSPCIG00000004342	YTHDC2	100	79.291	Phascolarctos_cinereus
ENSXETG00000021517	ythdc2	99	56.055	ENSPFOG00000003895	YTHDC2	99	60.756	Poecilia_formosa
ENSXETG00000021517	ythdc2	99	56.829	ENSPLAG00000007558	YTHDC2	99	56.586	Poecilia_latipinna
ENSXETG00000021517	ythdc2	97	57.256	ENSPMEG00000015205	YTHDC2	99	56.881	Poecilia_mexicana
ENSXETG00000021517	ythdc2	99	56.445	ENSPREG00000012096	YTHDC2	98	56.241	Poecilia_reticulata
ENSXETG00000021517	ythdc2	100	76.720	ENSPPYG00000015691	YTHDC2	100	77.762	Pongo_abelii
ENSXETG00000021517	ythdc2	88	72.650	ENSPCAG00000007733	YTHDC2	90	72.650	Procavia_capensis
ENSXETG00000021517	ythdc2	98	70.839	ENSPCOG00000017526	YTHDC2	100	70.952	Propithecus_coquereli
ENSXETG00000021517	ythdc2	100	76.280	ENSPVAG00000012364	YTHDC2	93	80.071	Pteropus_vampyrus
ENSXETG00000021517	ythdc2	100	55.830	ENSPNYG00000006908	YTHDC2	97	58.060	Pundamilia_nyererei
ENSXETG00000021517	ythdc2	99	67.300	ENSPNAG00000010128	YTHDC2	99	67.300	Pygocentrus_nattereri
ENSXETG00000021517	ythdc2	100	73.549	ENSRNOG00000039241	Ythdc2	98	76.025	Rattus_norvegicus
ENSXETG00000021517	ythdc2	100	75.465	ENSRBIG00000040291	YTHDC2	100	76.499	Rhinopithecus_bieti
ENSXETG00000021517	ythdc2	100	77.623	ENSRROG00000039477	YTHDC2	100	78.666	Rhinopithecus_roxellana
ENSXETG00000021517	ythdc2	100	77.623	ENSSBOG00000023829	YTHDC2	100	78.527	Saimiri_boliviensis_boliviensis
ENSXETG00000021517	ythdc2	98	79.801	ENSSHAG00000003101	YTHDC2	99	79.915	Sarcophilus_harrisii
ENSXETG00000021517	ythdc2	99	60.744	ENSSFOG00015003572	ythdc2	99	60.702	Scleropages_formosus
ENSXETG00000021517	ythdc2	99	45.868	ENSSMAG00000011225	YTHDC2	95	50.255	Scophthalmus_maximus
ENSXETG00000021517	ythdc2	98	59.179	ENSSDUG00000021389	YTHDC2	98	59.249	Seriola_dumerili
ENSXETG00000021517	ythdc2	98	61.056	ENSSLDG00000022840	YTHDC2	98	61.127	Seriola_lalandi_dorsalis
ENSXETG00000021517	ythdc2	88	76.589	ENSSARG00000000924	YTHDC2	94	76.589	Sorex_araneus
ENSXETG00000021517	ythdc2	100	72.849	ENSSPUG00000015912	-	100	73.324	Sphenodon_punctatus
ENSXETG00000021517	ythdc2	99	58.223	ENSSPAG00000014889	YTHDC2	99	58.293	Stegastes_partitus
ENSXETG00000021517	ythdc2	98	78.805	ENSSSCG00000014211	YTHDC2	100	79.396	Sus_scrofa
ENSXETG00000021517	ythdc2	69	72.334	ENSTGUG00000014992	-	98	73.081	Taeniopygia_guttata
ENSXETG00000021517	ythdc2	93	72.843	ENSTGUG00000003755	-	99	72.843	Taeniopygia_guttata
ENSXETG00000021517	ythdc2	98	50.568	ENSTRUG00000006717	YTHDC2	97	67.376	Takifugu_rubripes
ENSXETG00000021517	ythdc2	93	54.356	ENSTNIG00000003707	YTHDC2	99	54.133	Tetraodon_nigroviridis
ENSXETG00000021517	ythdc2	67	92.308	ENSTBEG00000006872	YTHDC2	84	78.065	Tupaia_belangeri
ENSXETG00000021517	ythdc2	80	90.667	ENSTTRG00000003116	YTHDC2	89	64.239	Tursiops_truncatus
ENSXETG00000021517	ythdc2	100	76.662	ENSUAMG00000003688	YTHDC2	99	80.479	Ursus_americanus
ENSXETG00000021517	ythdc2	97	78.339	ENSUMAG00000023877	YTHDC2	100	79.134	Ursus_maritimus
ENSXETG00000021517	ythdc2	98	71.622	ENSVPAG00000007516	YTHDC2	100	71.001	Vicugna_pacos
ENSXETG00000021517	ythdc2	98	78.805	ENSVVUG00000000281	YTHDC2	99	80.682	Vulpes_vulpes
ENSXETG00000021517	ythdc2	99	55.626	ENSXCOG00000016406	YTHDC2	99	55.556	Xiphophorus_couchianus
ENSXETG00000021517	ythdc2	99	56.648	ENSXMAG00000007618	YTHDC2	99	56.405	Xiphophorus_maculatus