EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000021579 (Gene tree)
Gene ID: -
Gene Symbol: sbno2
Alias: -
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 19221 bases
Position: chrGL172925.1:693633-712853
Accession: XB-GENE-486292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000046646	ResIII	PF04851.15	3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000046646	-	3390	-	ENSXETP00000046646	1130 (aa)	-	F6YBZ3

Gene Model

Click here to download ENSXETG00000021579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000021579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000021579	sbno2	96	52.797	ENSXETG00000031930	SBNO1	81	53.133

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000021579	sbno2	97	69.419	ENSG00000064932	SBNO2	79	70.327	Homo_sapiens
ENSXETG00000021579	sbno2	91	75.354	ENSAPOG00000003185	si:ch73-63e15.2	81	71.717	Acanthochromis_polyacanthus
ENSXETG00000021579	sbno2	91	75.556	ENSAOCG00000016581	si:ch73-63e15.2	82	75.152	Amphiprion_ocellaris
ENSXETG00000021579	sbno2	91	75.556	ENSAPEG00000008862	si:ch73-63e15.2	68	75.354	Amphiprion_percula
ENSXETG00000021579	sbno2	91	76.518	ENSATEG00000023838	si:ch73-63e15.2	84	76.518	Anabas_testudineus
ENSXETG00000021579	sbno2	91	80.517	ENSAPLG00000007158	SBNO2	81	80.517	Anas_platyrhynchos
ENSXETG00000021579	sbno2	98	69.093	ENSANAG00000026685	SBNO2	81	69.811	Aotus_nancymaae
ENSXETG00000021579	sbno2	91	74.239	ENSACLG00000005090	si:ch73-63e15.2	66	74.899	Astatotilapia_calliptera
ENSXETG00000021579	sbno2	91	75.752	ENSAMXG00000018868	sbno2a	83	75.752	Astyanax_mexicanus
ENSXETG00000021579	sbno2	90	76.162	ENSAMXG00000015881	si:ch73-63e15.2	75	76.162	Astyanax_mexicanus
ENSXETG00000021579	sbno2	91	77.426	ENSBTAG00000020780	SBNO2	79	78.812	Bos_taurus
ENSXETG00000021579	sbno2	91	77.624	ENSCAFG00000019543	SBNO2	75	79.010	Canis_familiaris
ENSXETG00000021579	sbno2	91	77.624	ENSCAFG00020017115	SBNO2	79	79.010	Canis_lupus_dingo
ENSXETG00000021579	sbno2	91	77.426	ENSCHIG00000026127	SBNO2	77	78.812	Capra_hircus
ENSXETG00000021579	sbno2	90	77.490	ENSCAPG00000005731	SBNO2	84	77.490	Cavia_aperea
ENSXETG00000021579	sbno2	90	77.490	ENSCPOG00000007477	SBNO2	78	77.490	Cavia_porcellus
ENSXETG00000021579	sbno2	98	68.823	ENSCCAG00000037518	SBNO2	81	69.542	Cebus_capucinus
ENSXETG00000021579	sbno2	97	69.691	ENSCATG00000037046	SBNO2	79	70.962	Cercocebus_atys
ENSXETG00000021579	sbno2	92	76.863	ENSCLAG00000010178	SBNO2	89	77.432	Chinchilla_lanigera
ENSXETG00000021579	sbno2	97	70.327	ENSCSAG00000012317	SBNO2	76	70.145	Chlorocebus_sabaeus
ENSXETG00000021579	sbno2	91	82.449	ENSCPBG00000008920	SBNO2	81	85.160	Chrysemys_picta_bellii
ENSXETG00000021579	sbno2	92	69.553	ENSCANG00000036745	SBNO2	86	70.913	Colobus_angolensis_palliatus
ENSXETG00000021579	sbno2	91	78.557	ENSCGRG00001023960	Sbno2	77	78.571	Cricetulus_griseus_chok1gshd
ENSXETG00000021579	sbno2	91	78.557	ENSCGRG00000011984	Sbno2	77	78.571	Cricetulus_griseus_crigri
ENSXETG00000021579	sbno2	91	71.457	ENSCSEG00000006856	si:ch73-63e15.2	91	71.457	Cynoglossus_semilaevis
ENSXETG00000021579	sbno2	90	76.566	ENSCVAG00000005663	si:ch73-63e15.2	69	76.566	Cyprinodon_variegatus
ENSXETG00000021579	sbno2	90	74.597	ENSDARG00000098801	sbno2a	76	74.597	Danio_rerio
ENSXETG00000021579	sbno2	91	77.126	ENSDARG00000016188	SBNO2	74	76.721	Danio_rerio
ENSXETG00000021579	sbno2	90	77.624	ENSDORG00000002916	Sbno2	76	78.571	Dipodomys_ordii
ENSXETG00000021579	sbno2	91	77.822	ENSEASG00005021621	SBNO2	79	79.208	Equus_asinus_asinus
ENSXETG00000021579	sbno2	91	77.822	ENSECAG00000011827	SBNO2	79	79.208	Equus_caballus
ENSXETG00000021579	sbno2	90	76.518	ENSELUG00000020457	si:ch73-63e15.2	71	76.518	Esox_lucius
ENSXETG00000021579	sbno2	91	78.800	ENSFALG00000013988	SBNO2	76	78.854	Ficedula_albicollis
ENSXETG00000021579	sbno2	98	67.931	ENSFDAG00000015186	SBNO2	80	67.931	Fukomys_damarensis
ENSXETG00000021579	sbno2	90	76.364	ENSFHEG00000022262	si:ch73-63e15.2	68	76.364	Fundulus_heteroclitus
ENSXETG00000021579	sbno2	91	76.471	ENSGMOG00000007542	si:ch73-63e15.2	87	76.471	Gadus_morhua
ENSXETG00000021579	sbno2	93	79.249	ENSGALG00000037522	SBNO2	77	79.249	Gallus_gallus
ENSXETG00000021579	sbno2	91	76.566	ENSGAFG00000004860	si:ch73-63e15.2	82	76.566	Gambusia_affinis
ENSXETG00000021579	sbno2	98	65.489	ENSGACG00000013190	si:ch73-63e15.2	86	66.516	Gasterosteus_aculeatus
ENSXETG00000021579	sbno2	90	81.621	ENSGAGG00000008348	SBNO2	76	81.621	Gopherus_agassizii
ENSXETG00000021579	sbno2	91	74.239	ENSHBUG00000010742	si:ch73-63e15.2	69	74.899	Haplochromis_burtoni
ENSXETG00000021579	sbno2	90	78.543	ENSHGLG00000008739	SBNO2	76	78.543	Heterocephalus_glaber_female
ENSXETG00000021579	sbno2	90	78.543	ENSHGLG00100005269	SBNO2	90	70.988	Heterocephalus_glaber_male
ENSXETG00000021579	sbno2	90	75.354	ENSHCOG00000000884	si:ch73-63e15.2	79	75.354	Hippocampus_comes
ENSXETG00000021579	sbno2	90	76.768	ENSIPUG00000000537	si:ch73-63e15.2	76	76.316	Ictalurus_punctatus
ENSXETG00000021579	sbno2	91	74.699	ENSIPUG00000019672	sbno2	82	76.353	Ictalurus_punctatus
ENSXETG00000021579	sbno2	90	78.156	ENSSTOG00000025832	SBNO2	76	78.175	Ictidomys_tridecemlineatus
ENSXETG00000021579	sbno2	90	78.020	ENSJJAG00000017397	Sbno2	76	78.218	Jaculus_jaculus
ENSXETG00000021579	sbno2	90	76.316	ENSKMAG00000005541	si:ch73-63e15.2	69	75.506	Kryptolebias_marmoratus
ENSXETG00000021579	sbno2	91	75.304	ENSLBEG00000025016	si:ch73-63e15.2	85	75.709	Labrus_bergylta
ENSXETG00000021579	sbno2	90	77.126	ENSLOCG00000004643	si:ch73-63e15.2	76	76.673	Lepisosteus_oculatus
ENSXETG00000021579	sbno2	88	80.705	ENSLAFG00000008824	SBNO2	81	78.812	Loxodonta_africana
ENSXETG00000021579	sbno2	97	68.631	ENSMFAG00000040030	SBNO2	81	69.810	Macaca_fascicularis
ENSXETG00000021579	sbno2	97	69.419	ENSMMUG00000010886	SBNO2	80	69.175	Macaca_mulatta
ENSXETG00000021579	sbno2	97	69.328	ENSMNEG00000039927	SBNO2	79	70.599	Macaca_nemestrina
ENSXETG00000021579	sbno2	89	70.059	ENSMLEG00000038556	SBNO2	81	71.443	Mandrillus_leucophaeus
ENSXETG00000021579	sbno2	91	76.113	ENSMAMG00000018758	si:ch73-63e15.2	68	75.147	Mastacembelus_armatus
ENSXETG00000021579	sbno2	91	74.239	ENSMZEG00005010682	si:ch73-63e15.2	66	74.899	Maylandia_zebra
ENSXETG00000021579	sbno2	91	78.669	ENSMGAG00000003801	SBNO2	80	78.669	Meleagris_gallopavo
ENSXETG00000021579	sbno2	89	81.092	ENSMAUG00000008034	Sbno2	77	79.167	Mesocricetus_auratus
ENSXETG00000021579	sbno2	90	77.515	ENSMICG00000013071	SBNO2	79	78.895	Microcebus_murinus
ENSXETG00000021579	sbno2	96	70.765	ENSMOCG00000010504	Sbno2	77	71.079	Microtus_ochrogaster
ENSXETG00000021579	sbno2	90	82.485	ENSMODG00000005382	SBNO2	73	82.485	Monodelphis_domestica
ENSXETG00000021579	sbno2	75	66.929	ENSMALG00000021831	si:ch73-63e15.2	87	66.929	Monopterus_albus
ENSXETG00000021579	sbno2	88	80.249	ENSMUSG00000035673	Sbno2	84	70.455	Mus_musculus
ENSXETG00000021579	sbno2	90	77.866	MGP_PahariEiJ_G0030976	Sbno2	76	78.656	Mus_pahari
ENSXETG00000021579	sbno2	91	78.063	MGP_SPRETEiJ_G0016381	Sbno2	81	78.854	Mus_spretus
ENSXETG00000021579	sbno2	76	77.778	ENSMPUG00000008747	SBNO2	80	78.416	Mustela_putorius_furo
ENSXETG00000021579	sbno2	97	68.688	ENSNGAG00000004308	Sbno2	79	68.688	Nannospalax_galili
ENSXETG00000021579	sbno2	90	72.379	ENSNBRG00000022968	si:ch73-63e15.2	93	75.506	Neolamprologus_brichardi
ENSXETG00000021579	sbno2	78	74.120	ENSNLEG00000001305	SBNO2	77	70.213	Nomascus_leucogenys
ENSXETG00000021579	sbno2	82	81.754	ENSMEUG00000013511	-	78	81.754	Notamacropus_eugenii
ENSXETG00000021579	sbno2	90	79.668	ENSOPRG00000017238	SBNO2	85	78.905	Ochotona_princeps
ENSXETG00000021579	sbno2	90	76.436	ENSODEG00000011822	SBNO2	76	76.436	Octodon_degus
ENSXETG00000021579	sbno2	91	75.304	ENSONIG00000002490	si:ch73-63e15.2	82	75.101	Oreochromis_niloticus
ENSXETG00000021579	sbno2	89	75.100	ENSORLG00000000913	si:ch73-63e15.2	72	74.701	Oryzias_latipes
ENSXETG00000021579	sbno2	89	75.100	ENSORLG00020010978	si:ch73-63e15.2	70	74.701	Oryzias_latipes_hni
ENSXETG00000021579	sbno2	89	75.100	ENSORLG00015000202	si:ch73-63e15.2	72	74.701	Oryzias_latipes_hsok
ENSXETG00000021579	sbno2	90	75.100	ENSOMEG00000000359	si:ch73-63e15.2	67	74.701	Oryzias_melastigma
ENSXETG00000021579	sbno2	91	74.851	ENSOARG00000011130	SBNO2	77	76.238	Ovis_aries
ENSXETG00000021579	sbno2	97	68.435	ENSPPAG00000032482	SBNO2	81	69.874	Pan_paniscus
ENSXETG00000021579	sbno2	97	69.419	ENSPTRG00000010185	SBNO2	79	70.962	Pan_troglodytes
ENSXETG00000021579	sbno2	97	66.515	ENSPANG00000009658	SBNO2	78	67.151	Papio_anubis
ENSXETG00000021579	sbno2	89	74.848	ENSPKIG00000024201	si:ch73-63e15.2	75	76.721	Paramormyrops_kingsleyae
ENSXETG00000021579	sbno2	87	73.428	ENSPKIG00000009707	-	82	75.878	Paramormyrops_kingsleyae
ENSXETG00000021579	sbno2	82	73.904	ENSPSIG00000002852	SBNO2	91	73.557	Pelodiscus_sinensis
ENSXETG00000021579	sbno2	91	72.008	ENSPMGG00000014375	si:ch73-63e15.2	80	71.197	Periophthalmus_magnuspinnatus
ENSXETG00000021579	sbno2	86	83.066	ENSPEMG00000024122	Sbno2	73	83.066	Peromyscus_maniculatus_bairdii
ENSXETG00000021579	sbno2	97	72.809	ENSPCIG00000011264	SBNO2	77	72.809	Phascolarctos_cinereus
ENSXETG00000021579	sbno2	91	76.566	ENSPFOG00000004096	si:ch73-63e15.2	90	66.667	Poecilia_formosa
ENSXETG00000021579	sbno2	91	76.566	ENSPLAG00000014653	si:ch73-63e15.2	68	76.566	Poecilia_latipinna
ENSXETG00000021579	sbno2	91	76.566	ENSPMEG00000002129	si:ch73-63e15.2	81	76.566	Poecilia_mexicana
ENSXETG00000021579	sbno2	91	76.768	ENSPREG00000006755	si:ch73-63e15.2	65	76.768	Poecilia_reticulata
ENSXETG00000021579	sbno2	91	74.059	ENSPCAG00000012256	SBNO2	76	74.059	Procavia_capensis
ENSXETG00000021579	sbno2	97	63.091	ENSPCOG00000015216	SBNO2	79	63.067	Propithecus_coquereli
ENSXETG00000021579	sbno2	91	74.239	ENSPNYG00000019926	si:ch73-63e15.2	69	74.899	Pundamilia_nyererei
ENSXETG00000021579	sbno2	90	76.162	ENSPNAG00000020260	si:ch73-63e15.2	75	75.758	Pygocentrus_nattereri
ENSXETG00000021579	sbno2	90	75.952	ENSPNAG00000026609	sbno2a	82	75.952	Pygocentrus_nattereri
ENSXETG00000021579	sbno2	92	78.063	ENSRNOG00000013987	Sbno2	81	78.854	Rattus_norvegicus
ENSXETG00000021579	sbno2	91	67.957	ENSRBIG00000009740	SBNO2	80	68.635	Rhinopithecus_bieti
ENSXETG00000021579	sbno2	85	72.468	ENSRROG00000044671	SBNO2	76	73.377	Rhinopithecus_roxellana
ENSXETG00000021579	sbno2	98	68.733	ENSSBOG00000023562	SBNO2	81	69.452	Saimiri_boliviensis_boliviensis
ENSXETG00000021579	sbno2	95	72.786	ENSSHAG00000010241	SBNO2	88	72.786	Sarcophilus_harrisii
ENSXETG00000021579	sbno2	90	74.797	ENSSFOG00015005861	si:ch73-63e15.2	85	74.498	Scleropages_formosus
ENSXETG00000021579	sbno2	91	74.494	ENSSMAG00000012489	si:ch73-63e15.2	66	74.291	Scophthalmus_maximus
ENSXETG00000021579	sbno2	91	75.506	ENSSDUG00000003527	si:ch73-63e15.2	66	75.304	Seriola_dumerili
ENSXETG00000021579	sbno2	91	75.506	ENSSLDG00000004623	si:ch73-63e15.2	66	75.304	Seriola_lalandi_dorsalis
ENSXETG00000021579	sbno2	91	76.316	ENSSPAG00000017717	si:ch73-63e15.2	69	76.316	Stegastes_partitus
ENSXETG00000021579	sbno2	91	77.624	ENSSSCG00000030042	SBNO2	80	79.010	Sus_scrofa
ENSXETG00000021579	sbno2	88	74.800	ENSTRUG00000018193	si:ch73-63e15.2	78	74.800	Takifugu_rubripes
ENSXETG00000021579	sbno2	82	77.624	ENSUAMG00000006568	SBNO2	91	81.532	Ursus_americanus
ENSXETG00000021579	sbno2	91	77.624	ENSVVUG00000022823	SBNO2	74	79.010	Vulpes_vulpes
ENSXETG00000021579	sbno2	73	76.566	ENSXCOG00000009209	si:ch73-63e15.2	84	76.566	Xiphophorus_couchianus
ENSXETG00000021579	sbno2	91	76.566	ENSXMAG00000012091	si:ch73-63e15.2	81	76.566	Xiphophorus_maculatus