EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000021611 (Gene tree)
Gene ID: -
Gene Symbol: nom1
Alias: -
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 12841 bases
Position: chrGL172770.1:2375333-2388173
Accession: XB-GENE-5954463
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000046708	MA3	PF02847.17	3.6e-23	1	1
ENSXETP00000064043	MIF4G	PF02854.19	2.5e-17	1	1
ENSXETP00000046708	MIF4G	PF02854.19	3.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000046708	-	2532	-	ENSXETP00000046708	843 (aa)	-	F6TMF4
ENSXETT00000062086	-	750	-	ENSXETP00000064043	249 (aa)	-	F7BBJ5

Gene Model

Click here to download ENSXETG00000021611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000021611's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000021611	nom1	92	71.552	ENSG00000146909	NOM1	97	54.737	Homo_sapiens
ENSXETG00000021611	nom1	82	76.098	ENSAPOG00000012073	nom1	90	56.016	Acanthochromis_polyacanthus
ENSXETG00000021611	nom1	92	69.130	ENSAMEG00000001412	NOM1	99	56.166	Ailuropoda_melanoleuca
ENSXETG00000021611	nom1	82	74.146	ENSACIG00000018050	nom1	87	54.293	Amphilophus_citrinellus
ENSXETG00000021611	nom1	82	77.073	ENSAOCG00000006229	nom1	91	56.274	Amphiprion_ocellaris
ENSXETG00000021611	nom1	82	77.073	ENSAPEG00000015994	nom1	90	55.853	Amphiprion_percula
ENSXETG00000021611	nom1	82	73.659	ENSATEG00000005405	nom1	88	55.851	Anabas_testudineus
ENSXETG00000021611	nom1	82	77.073	ENSAPLG00000006585	NOM1	100	58.177	Anas_platyrhynchos
ENSXETG00000021611	nom1	82	76.098	ENSACAG00000011192	NOM1	87	58.146	Anolis_carolinensis
ENSXETG00000021611	nom1	82	72.195	ENSACLG00000000033	nom1	88	55.791	Astatotilapia_calliptera
ENSXETG00000021611	nom1	82	72.816	ENSAMXG00000041486	nom1	91	54.660	Astyanax_mexicanus
ENSXETG00000021611	nom1	82	70.732	ENSBTAG00000016435	NOM1	96	51.887	Bos_taurus
ENSXETG00000021611	nom1	94	68.936	ENSCJAG00000004336	NOM1	97	54.717	Callithrix_jacchus
ENSXETG00000021611	nom1	57	69.014	ENSCAFG00000029845	-	76	43.839	Canis_familiaris
ENSXETG00000021611	nom1	92	69.828	ENSCAFG00020005121	NOM1	85	55.673	Canis_lupus_dingo
ENSXETG00000021611	nom1	82	70.732	ENSCHIG00000020102	NOM1	96	51.240	Capra_hircus
ENSXETG00000021611	nom1	94	69.528	ENSTSYG00000000227	NOM1	96	52.893	Carlito_syrichta
ENSXETG00000021611	nom1	94	68.511	ENSCAPG00000016273	NOM1	94	68.980	Cavia_aperea
ENSXETG00000021611	nom1	94	60.851	ENSCPOG00000025538	NOM1	83	54.926	Cavia_porcellus
ENSXETG00000021611	nom1	71	70.644	ENSCCAG00000014944	NOM1	99	72.080	Cebus_capucinus
ENSXETG00000021611	nom1	82	74.634	ENSCLAG00000000267	NOM1	85	56.818	Chinchilla_lanigera
ENSXETG00000021611	nom1	82	77.561	ENSCPBG00000018215	NOM1	84	73.038	Chrysemys_picta_bellii
ENSXETG00000021611	nom1	80	37.811	ENSCING00000005248	-	95	35.984	Ciona_intestinalis
ENSXETG00000021611	nom1	94	70.638	ENSCANG00000041984	NOM1	84	70.325	Colobus_angolensis_palliatus
ENSXETG00000021611	nom1	94	70.213	ENSCGRG00001020293	Nom1	98	51.519	Cricetulus_griseus_chok1gshd
ENSXETG00000021611	nom1	92	70.690	ENSCGRG00000005405	Nom1	92	69.043	Cricetulus_griseus_crigri
ENSXETG00000021611	nom1	82	72.059	ENSCSEG00000000932	nom1	79	56.725	Cynoglossus_semilaevis
ENSXETG00000021611	nom1	82	75.122	ENSCVAG00000007562	nom1	88	55.249	Cyprinodon_variegatus
ENSXETG00000021611	nom1	82	70.388	ENSDARG00000060027	nom1	100	65.298	Danio_rerio
ENSXETG00000021611	nom1	92	69.565	ENSDORG00000015682	Nom1	99	49.645	Dipodomys_ordii
ENSXETG00000021611	nom1	82	40.476	FBgn0035336	CG9004	80	36.017	Drosophila_melanogaster
ENSXETG00000021611	nom1	74	59.666	ENSETEG00000003104	NOM1	82	59.666	Echinops_telfairi
ENSXETG00000021611	nom1	59	48.322	ENSEBUG00000010077	nom1	96	51.835	Eptatretus_burgeri
ENSXETG00000021611	nom1	94	68.511	ENSEASG00005001489	NOM1	96	54.123	Equus_asinus_asinus
ENSXETG00000021611	nom1	94	68.085	ENSECAG00000007596	NOM1	90	53.187	Equus_caballus
ENSXETG00000021611	nom1	82	72.195	ENSELUG00000006266	nom1	87	57.050	Esox_lucius
ENSXETG00000021611	nom1	94	68.670	ENSFCAG00000006467	NOM1	98	52.453	Felis_catus
ENSXETG00000021611	nom1	82	75.122	ENSFALG00000006904	NOM1	99	59.716	Ficedula_albicollis
ENSXETG00000021611	nom1	94	66.809	ENSFDAG00000016241	NOM1	97	53.317	Fukomys_damarensis
ENSXETG00000021611	nom1	82	72.683	ENSFHEG00000015974	nom1	85	56.301	Fundulus_heteroclitus
ENSXETG00000021611	nom1	82	67.647	ENSGMOG00000005129	nom1	96	51.876	Gadus_morhua
ENSXETG00000021611	nom1	82	75.610	ENSGALG00000006437	NOM1	93	52.674	Gallus_gallus
ENSXETG00000021611	nom1	82	72.683	ENSGAFG00000003211	nom1	85	56.250	Gambusia_affinis
ENSXETG00000021611	nom1	82	79.024	ENSGAGG00000014347	NOM1	85	72.435	Gopherus_agassizii
ENSXETG00000021611	nom1	94	70.386	ENSGGOG00000010920	NOM1	90	53.547	Gorilla_gorilla
ENSXETG00000021611	nom1	82	71.707	ENSHBUG00000014616	nom1	89	54.889	Haplochromis_burtoni
ENSXETG00000021611	nom1	94	68.511	ENSHGLG00000007392	NOM1	98	52.249	Heterocephalus_glaber_female
ENSXETG00000021611	nom1	94	68.511	ENSHGLG00100014407	NOM1	97	68.489	Heterocephalus_glaber_male
ENSXETG00000021611	nom1	82	69.417	ENSIPUG00000013980	nom1	85	55.466	Ictalurus_punctatus
ENSXETG00000021611	nom1	92	71.983	ENSSTOG00000031736	NOM1	86	70.265	Ictidomys_tridecemlineatus
ENSXETG00000021611	nom1	92	71.429	ENSJJAG00000011716	Nom1	98	71.074	Jaculus_jaculus
ENSXETG00000021611	nom1	82	74.146	ENSLBEG00000009252	nom1	88	55.033	Labrus_bergylta
ENSXETG00000021611	nom1	82	74.634	ENSLACG00000011777	NOM1	100	56.308	Latimeria_chalumnae
ENSXETG00000021611	nom1	82	77.073	ENSLOCG00000012452	nom1	90	58.988	Lepisosteus_oculatus
ENSXETG00000021611	nom1	92	54.545	ENSLAFG00000007119	NOM1	99	48.605	Loxodonta_africana
ENSXETG00000021611	nom1	82	77.073	ENSMMUG00000039033	NOM1	97	50.734	Macaca_mulatta
ENSXETG00000021611	nom1	94	70.213	ENSMLEG00000037062	NOM1	92	70.732	Mandrillus_leucophaeus
ENSXETG00000021611	nom1	82	73.659	ENSMAMG00000004118	nom1	87	54.847	Mastacembelus_armatus
ENSXETG00000021611	nom1	82	72.195	ENSMZEG00005000384	nom1	88	55.263	Maylandia_zebra
ENSXETG00000021611	nom1	82	75.610	ENSMGAG00000005051	NOM1	99	57.063	Meleagris_gallopavo
ENSXETG00000021611	nom1	94	70.638	ENSMAUG00000017988	Nom1	97	54.708	Mesocricetus_auratus
ENSXETG00000021611	nom1	92	68.696	ENSMICG00000017531	NOM1	99	52.588	Microcebus_murinus
ENSXETG00000021611	nom1	94	70.213	ENSMOCG00000015962	Nom1	97	51.916	Microtus_ochrogaster
ENSXETG00000021611	nom1	82	75.122	ENSMMOG00000004419	nom1	89	51.913	Mola_mola
ENSXETG00000021611	nom1	82	79.024	ENSMODG00000005177	NOM1	99	53.908	Monodelphis_domestica
ENSXETG00000021611	nom1	82	75.122	ENSMALG00000008800	nom1	85	56.392	Monopterus_albus
ENSXETG00000021611	nom1	94	69.362	MGP_CAROLIEiJ_G0027043	Nom1	96	54.102	Mus_caroli
ENSXETG00000021611	nom1	94	69.362	ENSMUSG00000001569	Nom1	96	52.669	Mus_musculus
ENSXETG00000021611	nom1	94	69.362	MGP_SPRETEiJ_G0028039	Nom1	96	52.669	Mus_spretus
ENSXETG00000021611	nom1	94	66.383	ENSMPUG00000009745	NOM1	99	56.276	Mustela_putorius_furo
ENSXETG00000021611	nom1	92	70.690	ENSMLUG00000009129	NOM1	81	69.715	Myotis_lucifugus
ENSXETG00000021611	nom1	82	72.683	ENSNBRG00000016429	nom1	90	66.667	Neolamprologus_brichardi
ENSXETG00000021611	nom1	92	72.414	ENSNLEG00000000238	NOM1	97	52.804	Nomascus_leucogenys
ENSXETG00000021611	nom1	82	79.024	ENSMEUG00000001108	NOM1	86	54.802	Notamacropus_eugenii
ENSXETG00000021611	nom1	70	74.713	ENSOPRG00000014676	NOM1	87	45.865	Ochotona_princeps
ENSXETG00000021611	nom1	94	66.809	ENSODEG00000009399	NOM1	99	57.303	Octodon_degus
ENSXETG00000021611	nom1	82	71.707	ENSONIG00000005958	nom1	94	55.952	Oreochromis_niloticus
ENSXETG00000021611	nom1	75	74.866	ENSOANG00000006139	-	97	70.346	Ornithorhynchus_anatinus
ENSXETG00000021611	nom1	94	72.340	ENSOCUG00000004071	-	96	55.396	Oryctolagus_cuniculus
ENSXETG00000021611	nom1	93	62.931	ENSOCUG00000021448	-	90	49.443	Oryctolagus_cuniculus
ENSXETG00000021611	nom1	82	69.756	ENSORLG00000010541	nom1	90	52.792	Oryzias_latipes
ENSXETG00000021611	nom1	82	69.756	ENSORLG00020010789	nom1	98	52.411	Oryzias_latipes_hni
ENSXETG00000021611	nom1	82	69.756	ENSORLG00015010475	nom1	98	52.345	Oryzias_latipes_hsok
ENSXETG00000021611	nom1	82	70.732	ENSOMEG00000004219	nom1	91	53.009	Oryzias_melastigma
ENSXETG00000021611	nom1	94	70.815	ENSOGAG00000001124	NOM1	99	60.968	Otolemur_garnettii
ENSXETG00000021611	nom1	82	70.732	ENSOARG00000007261	NOM1	99	53.806	Ovis_aries
ENSXETG00000021611	nom1	92	71.121	ENSPPAG00000041374	NOM1	97	54.085	Pan_paniscus
ENSXETG00000021611	nom1	92	69.130	ENSPTIG00000013532	NOM1	95	56.962	Panthera_tigris_altaica
ENSXETG00000021611	nom1	94	69.787	ENSPTRG00000019917	NOM1	99	53.697	Pan_troglodytes
ENSXETG00000021611	nom1	94	70.213	ENSPANG00000007605	NOM1	97	52.921	Papio_anubis
ENSXETG00000021611	nom1	82	64.563	ENSPKIG00000005825	nom1	99	47.520	Paramormyrops_kingsleyae
ENSXETG00000021611	nom1	82	79.512	ENSPSIG00000017848	NOM1	83	73.441	Pelodiscus_sinensis
ENSXETG00000021611	nom1	82	73.659	ENSPMGG00000002577	nom1	85	57.713	Periophthalmus_magnuspinnatus
ENSXETG00000021611	nom1	94	70.213	ENSPEMG00000024180	Nom1	97	52.392	Peromyscus_maniculatus_bairdii
ENSXETG00000021611	nom1	82	78.537	ENSPCIG00000027941	NOM1	95	53.855	Phascolarctos_cinereus
ENSXETG00000021611	nom1	82	73.659	ENSPFOG00000015771	nom1	87	54.424	Poecilia_formosa
ENSXETG00000021611	nom1	82	73.659	ENSPLAG00000007856	nom1	99	49.533	Poecilia_latipinna
ENSXETG00000021611	nom1	82	72.683	ENSPMEG00000014155	nom1	87	54.497	Poecilia_mexicana
ENSXETG00000021611	nom1	82	73.659	ENSPREG00000008850	nom1	86	54.388	Poecilia_reticulata
ENSXETG00000021611	nom1	71	74.432	ENSPPYG00000018222	NOM1	97	50.058	Pongo_abelii
ENSXETG00000021611	nom1	94	70.513	ENSPCAG00000000440	NOM1	87	64.706	Procavia_capensis
ENSXETG00000021611	nom1	94	68.240	ENSPCOG00000015222	NOM1	97	66.603	Propithecus_coquereli
ENSXETG00000021611	nom1	94	67.382	ENSPVAG00000014760	NOM1	99	50.000	Pteropus_vampyrus
ENSXETG00000021611	nom1	82	72.195	ENSPNYG00000006975	nom1	90	66.265	Pundamilia_nyererei
ENSXETG00000021611	nom1	82	70.874	ENSPNAG00000011085	nom1	85	53.181	Pygocentrus_nattereri
ENSXETG00000021611	nom1	82	75.610	ENSRNOG00000048969	AABR07059041.1	91	53.403	Rattus_norvegicus
ENSXETG00000021611	nom1	94	70.815	ENSRBIG00000037042	NOM1	97	53.526	Rhinopithecus_bieti
ENSXETG00000021611	nom1	94	70.815	ENSRROG00000037293	NOM1	97	53.295	Rhinopithecus_roxellana
ENSXETG00000021611	nom1	84	31.532	YLR336C	-	55	31.845	Saccharomyces_cerevisiae
ENSXETG00000021611	nom1	82	69.118	ENSSHAG00000002835	-	91	67.200	Sarcophilus_harrisii
ENSXETG00000021611	nom1	82	79.024	ENSSHAG00000017998	-	99	59.744	Sarcophilus_harrisii
ENSXETG00000021611	nom1	80	71.357	ENSSFOG00015003196	nom1	100	64.669	Scleropages_formosus
ENSXETG00000021611	nom1	82	74.146	ENSSMAG00000011047	nom1	90	54.759	Scophthalmus_maximus
ENSXETG00000021611	nom1	82	76.098	ENSSDUG00000006834	nom1	83	57.639	Seriola_dumerili
ENSXETG00000021611	nom1	82	75.122	ENSSLDG00000021812	nom1	83	56.414	Seriola_lalandi_dorsalis
ENSXETG00000021611	nom1	97	49.299	ENSSPUG00000002556	NOM1	100	57.851	Sphenodon_punctatus
ENSXETG00000021611	nom1	82	76.585	ENSSPAG00000000953	nom1	89	56.291	Stegastes_partitus
ENSXETG00000021611	nom1	82	74.634	ENSTGUG00000000702	-	99	58.699	Taeniopygia_guttata
ENSXETG00000021611	nom1	82	70.244	ENSTGUG00000016587	-	92	70.794	Taeniopygia_guttata
ENSXETG00000021611	nom1	82	73.659	ENSTRUG00000010239	nom1	90	54.026	Takifugu_rubripes
ENSXETG00000021611	nom1	82	71.220	ENSTNIG00000012783	nom1	90	55.858	Tetraodon_nigroviridis
ENSXETG00000021611	nom1	94	67.660	ENSTTRG00000009691	NOM1	87	55.468	Tursiops_truncatus
ENSXETG00000021611	nom1	92	69.397	ENSUAMG00000025450	NOM1	97	50.698	Ursus_americanus
ENSXETG00000021611	nom1	92	69.397	ENSUMAG00000014275	NOM1	99	56.768	Ursus_maritimus
ENSXETG00000021611	nom1	92	70.259	ENSVVUG00000002608	NOM1	85	55.482	Vulpes_vulpes
ENSXETG00000021611	nom1	82	72.683	ENSXMAG00000002451	nom1	86	55.526	Xiphophorus_maculatus