EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXETG00000021850 (Gene tree)
Gene ID: -
Gene Symbol: pym1
Alias: -
Full Name: Xenopus tropicalis PYM homolog 1%2C exon junction complex associated factor (pym1)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Plus strand
Length: 6619 bases
Position: chrGL172737.1:1429402-1436020
Accession: NM_001016274
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000047260	Mago-bind	PF09282.10	7.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000047260	-	988	-	ENSXETP00000047260	200 (aa)	-	A0A0X1KG82

Gene Model

Click here to download ENSXETG00000021850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000021850's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000021850	pym1	94	63.500	ENSG00000170473	PYM1	94	62.626	Homo_sapiens
ENSXETG00000021850	pym1	99	64.319	ENSAPOG00000023045	pym1	94	64.532	Acanthochromis_polyacanthus
ENSXETG00000021850	pym1	92	60.309	ENSAMEG00000003091	PYM1	93	58.947	Ailuropoda_melanoleuca
ENSXETG00000021850	pym1	99	63.850	ENSACIG00000012769	pym1	94	61.881	Amphilophus_citrinellus
ENSXETG00000021850	pym1	99	63.208	ENSAOCG00000021358	pym1	94	64.677	Amphiprion_ocellaris
ENSXETG00000021850	pym1	99	63.208	ENSAPEG00000022679	pym1	94	64.677	Amphiprion_percula
ENSXETG00000021850	pym1	99	61.429	ENSATEG00000024022	pym1	94	64.141	Anabas_testudineus
ENSXETG00000021850	pym1	94	62.069	ENSACAG00000005714	PYM1	94	60.099	Anolis_carolinensis
ENSXETG00000021850	pym1	94	63.682	ENSANAG00000036967	PYM1	94	62.814	Aotus_nancymaae
ENSXETG00000021850	pym1	100	58.962	ENSAMXG00000007650	pym1	94	61.000	Astyanax_mexicanus
ENSXETG00000021850	pym1	94	62.755	ENSBTAG00000031146	PYM1	94	61.856	Bos_taurus
ENSXETG00000021850	pym1	94	63.500	ENSCJAG00000041077	PYM1	94	62.626	Callithrix_jacchus
ENSXETG00000021850	pym1	94	63.959	ENSCAFG00000000076	PYM1	94	63.077	Canis_familiaris
ENSXETG00000021850	pym1	94	63.959	ENSCAFG00020026099	PYM1	94	63.077	Canis_lupus_dingo
ENSXETG00000021850	pym1	94	62.245	ENSCHIG00000026207	PYM1	94	61.340	Capra_hircus
ENSXETG00000021850	pym1	94	63.000	ENSTSYG00000000787	PYM1	94	62.121	Carlito_syrichta
ENSXETG00000021850	pym1	89	59.563	ENSCAPG00000010374	PYM1	94	59.563	Cavia_aperea
ENSXETG00000021850	pym1	94	61.026	ENSCPOG00000031546	PYM1	94	61.026	Cavia_porcellus
ENSXETG00000021850	pym1	94	63.500	ENSCCAG00000026187	PYM1	94	62.626	Cebus_capucinus
ENSXETG00000021850	pym1	94	63.452	ENSCATG00000018801	PYM1	94	62.564	Cercocebus_atys
ENSXETG00000021850	pym1	94	59.278	ENSCLAG00000007964	PYM1	94	59.278	Chinchilla_lanigera
ENSXETG00000021850	pym1	89	62.366	ENSCSAG00000005291	PYM1	92	61.413	Chlorocebus_sabaeus
ENSXETG00000021850	pym1	98	43.269	ENSCING00000006448	-	94	43.781	Ciona_intestinalis
ENSXETG00000021850	pym1	98	41.627	ENSCSAVG00000009805	-	89	42.211	Ciona_savignyi
ENSXETG00000021850	pym1	98	56.373	ENSCANG00000019757	-	86	58.974	Colobus_angolensis_palliatus
ENSXETG00000021850	pym1	94	63.452	ENSCANG00000020338	-	94	62.564	Colobus_angolensis_palliatus
ENSXETG00000021850	pym1	94	61.026	ENSCGRG00001018051	-	94	61.026	Cricetulus_griseus_chok1gshd
ENSXETG00000021850	pym1	93	53.476	ENSCGRG00001004231	-	91	54.011	Cricetulus_griseus_chok1gshd
ENSXETG00000021850	pym1	93	53.476	ENSCGRG00000018933	-	91	54.011	Cricetulus_griseus_crigri
ENSXETG00000021850	pym1	94	61.026	ENSCGRG00000012495	-	94	61.026	Cricetulus_griseus_crigri
ENSXETG00000021850	pym1	94	61.658	ENSCSEG00000021531	pym1	94	62.051	Cynoglossus_semilaevis
ENSXETG00000021850	pym1	98	63.107	ENSCVAG00000017360	pym1	83	63.077	Cyprinodon_variegatus
ENSXETG00000021850	pym1	99	56.158	ENSDARG00000046024	pym1	94	56.995	Danio_rerio
ENSXETG00000021850	pym1	94	60.784	ENSDNOG00000048414	PYM1	86	59.901	Dasypus_novemcinctus
ENSXETG00000021850	pym1	94	63.452	ENSDORG00000029448	Pym1	94	62.564	Dipodomys_ordii
ENSXETG00000021850	pym1	99	32.110	FBgn0034918	Pym	92	31.220	Drosophila_melanogaster
ENSXETG00000021850	pym1	89	61.081	ENSETEG00000004461	-	94	61.081	Echinops_telfairi
ENSXETG00000021850	pym1	88	59.239	ENSEASG00005002271	PYM1	81	60.989	Equus_asinus_asinus
ENSXETG00000021850	pym1	94	63.959	ENSECAG00000011870	PYM1	94	63.077	Equus_caballus
ENSXETG00000021850	pym1	96	60.309	ENSELUG00000024250	pym1	94	57.868	Esox_lucius
ENSXETG00000021850	pym1	94	63.959	ENSFCAG00000013967	PYM1	94	63.077	Felis_catus
ENSXETG00000021850	pym1	94	64.615	ENSFDAG00000006314	PYM1	94	64.615	Fukomys_damarensis
ENSXETG00000021850	pym1	94	61.650	ENSFHEG00000005884	pym1	94	60.784	Fundulus_heteroclitus
ENSXETG00000021850	pym1	94	58.549	ENSGMOG00000007239	pym1	93	58.163	Gadus_morhua
ENSXETG00000021850	pym1	94	68.020	ENSGALG00000046169	PYM1	94	65.990	Gallus_gallus
ENSXETG00000021850	pym1	99	61.682	ENSGAFG00000003280	pym1	93	62.500	Gambusia_affinis
ENSXETG00000021850	pym1	99	60.606	ENSGACG00000010703	pym1	94	59.788	Gasterosteus_aculeatus
ENSXETG00000021850	pym1	92	60.101	ENSGAGG00000001973	PYM1	84	59.487	Gopherus_agassizii
ENSXETG00000021850	pym1	94	63.500	ENSGGOG00000043246	PYM1	94	62.626	Gorilla_gorilla
ENSXETG00000021850	pym1	94	64.322	ENSHBUG00000012719	pym1	94	65.803	Haplochromis_burtoni
ENSXETG00000021850	pym1	94	63.131	ENSHGLG00000017155	PYM1	94	63.131	Heterocephalus_glaber_female
ENSXETG00000021850	pym1	94	63.131	ENSHGLG00100015341	PYM1	94	63.131	Heterocephalus_glaber_male
ENSXETG00000021850	pym1	99	61.611	ENSHCOG00000007987	pym1	81	61.929	Hippocampus_comes
ENSXETG00000021850	pym1	100	62.559	ENSIPUG00000005975	wibga	94	62.814	Ictalurus_punctatus
ENSXETG00000021850	pym1	94	64.467	ENSSTOG00000014206	PYM1	94	63.590	Ictidomys_tridecemlineatus
ENSXETG00000021850	pym1	94	64.062	ENSJJAG00000013338	Pym1	94	64.062	Jaculus_jaculus
ENSXETG00000021850	pym1	100	54.867	ENSKMAG00000006351	pym1	95	59.330	Kryptolebias_marmoratus
ENSXETG00000021850	pym1	99	62.500	ENSLBEG00000015707	pym1	93	63.918	Labrus_bergylta
ENSXETG00000021850	pym1	90	58.163	ENSLACG00000014398	PYM1	89	57.868	Latimeria_chalumnae
ENSXETG00000021850	pym1	94	63.959	ENSLAFG00000002369	PYM1	94	63.077	Loxodonta_africana
ENSXETG00000021850	pym1	94	63.452	ENSMFAG00000003048	PYM1	94	62.564	Macaca_fascicularis
ENSXETG00000021850	pym1	94	63.452	ENSMMUG00000011002	PYM1	94	62.564	Macaca_mulatta
ENSXETG00000021850	pym1	94	63.452	ENSMNEG00000034677	PYM1	94	62.564	Macaca_nemestrina
ENSXETG00000021850	pym1	94	63.452	ENSMLEG00000007971	PYM1	94	62.564	Mandrillus_leucophaeus
ENSXETG00000021850	pym1	99	62.150	ENSMAMG00000001588	pym1	94	62.927	Mastacembelus_armatus
ENSXETG00000021850	pym1	94	63.819	ENSMZEG00005026458	pym1	94	65.285	Maylandia_zebra
ENSXETG00000021850	pym1	94	61.026	ENSMAUG00000007318	Pym1	94	61.026	Mesocricetus_auratus
ENSXETG00000021850	pym1	94	63.131	ENSMICG00000032962	PYM1	94	63.077	Microcebus_murinus
ENSXETG00000021850	pym1	94	60.938	ENSMOCG00000010208	Pym1	94	61.979	Microtus_ochrogaster
ENSXETG00000021850	pym1	99	59.606	ENSMMOG00000009301	pym1	92	60.106	Mola_mola
ENSXETG00000021850	pym1	99	61.429	ENSMALG00000013496	pym1	94	62.312	Monopterus_albus
ENSXETG00000021850	pym1	94	59.487	MGP_CAROLIEiJ_G0015953	Pym1	94	59.487	Mus_caroli
ENSXETG00000021850	pym1	94	62.564	ENSMUSG00000064030	Pym1	94	62.564	Mus_musculus
ENSXETG00000021850	pym1	94	63.212	MGP_PahariEiJ_G0031131	Pym1	94	62.887	Mus_pahari
ENSXETG00000021850	pym1	94	60.302	MGP_SPRETEiJ_G0016778	Pym1	94	60.000	Mus_spretus
ENSXETG00000021850	pym1	94	63.959	ENSMPUG00000000931	PYM1	94	63.077	Mustela_putorius_furo
ENSXETG00000021850	pym1	94	59.898	ENSMLUG00000003586	PYM1	94	60.101	Myotis_lucifugus
ENSXETG00000021850	pym1	90	63.978	ENSNGAG00000019207	Pym1	88	63.441	Nannospalax_galili
ENSXETG00000021850	pym1	99	64.286	ENSNBRG00000006951	pym1	94	65.327	Neolamprologus_brichardi
ENSXETG00000021850	pym1	94	63.500	ENSNLEG00000017588	PYM1	94	62.626	Nomascus_leucogenys
ENSXETG00000021850	pym1	88	58.242	ENSMEUG00000001017	PYM1	93	57.778	Notamacropus_eugenii
ENSXETG00000021850	pym1	92	59.043	ENSOPRG00000007797	PYM1	91	57.143	Ochotona_princeps
ENSXETG00000021850	pym1	94	64.103	ENSODEG00000004289	PYM1	94	64.103	Octodon_degus
ENSXETG00000021850	pym1	94	63.861	ENSONIG00000016740	pym1	94	63.861	Oreochromis_niloticus
ENSXETG00000021850	pym1	89	60.541	ENSOCUG00000025969	PYM1	81	60.541	Oryctolagus_cuniculus
ENSXETG00000021850	pym1	99	64.593	ENSORLG00000030592	pym1	94	63.452	Oryzias_latipes
ENSXETG00000021850	pym1	99	59.716	ENSORLG00020011264	pym1	94	62.814	Oryzias_latipes_hni
ENSXETG00000021850	pym1	99	64.904	ENSORLG00015005287	pym1	94	64.975	Oryzias_latipes_hsok
ENSXETG00000021850	pym1	99	63.462	ENSOMEG00000022250	pym1	94	63.959	Oryzias_melastigma
ENSXETG00000021850	pym1	89	62.963	ENSOGAG00000007038	PYM1	88	62.032	Otolemur_garnettii
ENSXETG00000021850	pym1	94	62.245	ENSOARG00000010856	PYM1	94	60.825	Ovis_aries
ENSXETG00000021850	pym1	94	63.500	ENSPPAG00000043630	PYM1	94	62.626	Pan_paniscus
ENSXETG00000021850	pym1	94	63.959	ENSPPRG00000013243	PYM1	94	63.077	Panthera_pardus
ENSXETG00000021850	pym1	94	63.452	ENSPTIG00000017380	PYM1	94	62.564	Panthera_tigris_altaica
ENSXETG00000021850	pym1	94	63.500	ENSPTRG00000005067	PYM1	94	62.626	Pan_troglodytes
ENSXETG00000021850	pym1	94	63.959	ENSPANG00000009562	PYM1	94	63.077	Papio_anubis
ENSXETG00000021850	pym1	100	62.136	ENSPKIG00000006301	pym1	94	58.049	Paramormyrops_kingsleyae
ENSXETG00000021850	pym1	94	61.692	ENSPSIG00000003043	PYM1	94	59.701	Pelodiscus_sinensis
ENSXETG00000021850	pym1	100	64.039	ENSPMGG00000023161	pym1	94	63.351	Periophthalmus_magnuspinnatus
ENSXETG00000021850	pym1	94	61.658	ENSPEMG00000009372	Pym1	94	60.622	Peromyscus_maniculatus_bairdii
ENSXETG00000021850	pym1	88	59.116	ENSPCIG00000024658	PYM1	87	59.016	Phascolarctos_cinereus
ENSXETG00000021850	pym1	99	63.636	ENSPFOG00000008193	pym1	93	64.322	Poecilia_formosa
ENSXETG00000021850	pym1	99	61.751	ENSPLAG00000009228	pym1	93	62.562	Poecilia_latipinna
ENSXETG00000021850	pym1	99	61.751	ENSPMEG00000001505	pym1	93	62.562	Poecilia_mexicana
ENSXETG00000021850	pym1	90	62.827	ENSPPYG00000004635	PYM1	92	62.032	Pongo_abelii
ENSXETG00000021850	pym1	94	63.000	ENSPCOG00000019706	PYM1	94	62.121	Propithecus_coquereli
ENSXETG00000021850	pym1	90	63.351	ENSPVAG00000011437	PYM1	92	62.766	Pteropus_vampyrus
ENSXETG00000021850	pym1	94	64.646	ENSPNYG00000012871	pym1	94	65.657	Pundamilia_nyererei
ENSXETG00000021850	pym1	100	60.550	ENSPNAG00000018833	pym1	94	58.738	Pygocentrus_nattereri
ENSXETG00000021850	pym1	94	58.163	ENSRNOG00000058130	Pym1	92	59.694	Rattus_norvegicus
ENSXETG00000021850	pym1	94	48.223	ENSRNOG00000049415	AABR07055413.1	94	48.020	Rattus_norvegicus
ENSXETG00000021850	pym1	94	59.391	ENSRBIG00000033362	PYM1	94	58.462	Rhinopithecus_bieti
ENSXETG00000021850	pym1	94	63.452	ENSRROG00000043620	PYM1	94	62.564	Rhinopithecus_roxellana
ENSXETG00000021850	pym1	94	63.500	ENSSBOG00000029393	PYM1	94	62.626	Saimiri_boliviensis_boliviensis
ENSXETG00000021850	pym1	93	61.458	ENSSHAG00000008280	PYM1	93	61.458	Sarcophilus_harrisii
ENSXETG00000021850	pym1	93	62.766	ENSSFOG00015021475	pym1	94	60.825	Scleropages_formosus
ENSXETG00000021850	pym1	99	61.502	ENSSMAG00000020912	pym1	94	61.421	Scophthalmus_maximus
ENSXETG00000021850	pym1	99	60.185	ENSSDUG00000001807	pym1	94	62.439	Seriola_dumerili
ENSXETG00000021850	pym1	99	61.538	ENSSLDG00000013730	pym1	94	63.402	Seriola_lalandi_dorsalis
ENSXETG00000021850	pym1	89	60.963	ENSSARG00000009569	PYM1	94	62.703	Sorex_araneus
ENSXETG00000021850	pym1	97	63.184	ENSSPUG00000015059	PYM1	91	61.905	Sphenodon_punctatus
ENSXETG00000021850	pym1	99	62.617	ENSSPAG00000020100	pym1	94	63.902	Stegastes_partitus
ENSXETG00000021850	pym1	94	64.322	ENSSSCG00000040825	PYM1	94	63.452	Sus_scrofa
ENSXETG00000021850	pym1	99	61.951	ENSTRUG00000021367	pym1	93	63.874	Takifugu_rubripes
ENSXETG00000021850	pym1	99	60.891	ENSTNIG00000012534	pym1	92	64.737	Tetraodon_nigroviridis
ENSXETG00000021850	pym1	89	56.989	ENSTBEG00000004208	PYM1	94	55.978	Tupaia_belangeri
ENSXETG00000021850	pym1	90	64.171	ENSTTRG00000014971	PYM1	92	63.243	Tursiops_truncatus
ENSXETG00000021850	pym1	94	62.312	ENSUAMG00000014521	PYM1	94	61.421	Ursus_americanus
ENSXETG00000021850	pym1	92	58.763	ENSUMAG00000016241	PYM1	81	59.459	Ursus_maritimus
ENSXETG00000021850	pym1	94	63.959	ENSVVUG00000022749	PYM1	94	63.077	Vulpes_vulpes
ENSXETG00000021850	pym1	99	61.972	ENSXMAG00000011649	pym1	93	62.814	Xiphophorus_maculatus