EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXETG00000021865 (Gene tree)
Gene ID: -
Gene Symbol: poc1b
Alias: -
Full Name: Xenopus tropicalis POC1 centriolar protein B (poc1b)%2C mRNA.
Gene Type: protein_coding
Species: Xenopus_tropicalis
Status: putative
Strand: Minus strand
Length: 46288 bases
Position: chrGL172895.1:1009716-1056003
Accession: NM_001004988
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXETP00000060038	eIF2A	PF08662.11	1.1e-09	1	1
ENSXETP00000047331	eIF2A	PF08662.11	2.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXETT00000047331	-	1503	-	ENSXETP00000047331	470 (aa)	XP_012814294	F6ZT52
ENSXETT00000064417	-	1344	-	ENSXETP00000060038	379 (aa)	-	F6ZT52

Gene Model

Click here to download ENSXETG00000021865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXETG00000021865's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXETG00000021865	poc1b	82	32.895	ENSXETG00000009920	wdr3	55	32.203
ENSXETG00000021865	poc1b	79	32.026	ENSXETG00000011004	wdr36	60	32.026
ENSXETG00000021865	poc1b	82	31.716	ENSXETG00000019588	wdr5	89	31.716
ENSXETG00000021865	poc1b	90	61.176	ENSXETG00000010813	poc1a	98	54.031

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXETG00000021865	poc1b	96	64.011	ENSG00000139323	POC1B	99	65.556	Homo_sapiens
ENSXETG00000021865	poc1b	93	64.157	ENSAMEG00000001812	POC1B	98	57.596	Ailuropoda_melanoleuca
ENSXETG00000021865	poc1b	96	64.560	ENSANAG00000023816	POC1B	98	58.985	Aotus_nancymaae
ENSXETG00000021865	poc1b	96	63.187	ENSBTAG00000000687	POC1B	98	58.051	Bos_taurus
ENSXETG00000021865	poc1b	96	63.736	ENSCJAG00000019637	POC1B	98	58.263	Callithrix_jacchus
ENSXETG00000021865	poc1b	95	64.345	ENSCAFG00000006105	POC1B	97	58.798	Canis_familiaris
ENSXETG00000021865	poc1b	94	64.286	ENSCAFG00020016403	POC1B	98	58.275	Canis_lupus_dingo
ENSXETG00000021865	poc1b	96	63.187	ENSCHIG00000026402	POC1B	98	58.244	Capra_hircus
ENSXETG00000021865	poc1b	95	64.543	ENSTSYG00000010732	POC1B	95	60.858	Carlito_syrichta
ENSXETG00000021865	poc1b	94	59.327	ENSCAPG00000015652	POC1B	98	53.095	Cavia_aperea
ENSXETG00000021865	poc1b	96	64.011	ENSCPOG00000015525	POC1B	98	58.263	Cavia_porcellus
ENSXETG00000021865	poc1b	96	64.286	ENSCATG00000036201	POC1B	98	58.686	Cercocebus_atys
ENSXETG00000021865	poc1b	94	64.242	ENSCLAG00000006831	POC1B	98	57.763	Chinchilla_lanigera
ENSXETG00000021865	poc1b	91	65.407	ENSCSAG00000003775	POC1B	98	57.203	Chlorocebus_sabaeus
ENSXETG00000021865	poc1b	97	68.120	ENSCPBG00000000137	POC1B	100	60.581	Chrysemys_picta_bellii
ENSXETG00000021865	poc1b	96	64.011	ENSCANG00000043354	POC1B	98	58.475	Colobus_angolensis_palliatus
ENSXETG00000021865	poc1b	94	64.848	ENSDNOG00000011916	POC1B	99	57.978	Dasypus_novemcinctus
ENSXETG00000021865	poc1b	96	66.209	ENSDORG00000013903	Poc1b	98	60.510	Dipodomys_ordii
ENSXETG00000021865	poc1b	96	65.659	ENSEASG00005019319	POC1B	98	59.408	Equus_asinus_asinus
ENSXETG00000021865	poc1b	96	65.934	ENSECAG00000013326	POC1B	98	59.619	Equus_caballus
ENSXETG00000021865	poc1b	96	64.835	ENSFCAG00000007623	POC1B	98	58.811	Felis_catus
ENSXETG00000021865	poc1b	94	56.901	ENSFALG00000010636	POC1B	91	51.747	Ficedula_albicollis
ENSXETG00000021865	poc1b	94	64.242	ENSFDAG00000020160	POC1B	98	58.314	Fukomys_damarensis
ENSXETG00000021865	poc1b	94	66.947	ENSGAGG00000013124	POC1B	99	66.947	Gopherus_agassizii
ENSXETG00000021865	poc1b	96	63.736	ENSGGOG00000008572	POC1B	98	58.263	Gorilla_gorilla
ENSXETG00000021865	poc1b	96	64.835	ENSHGLG00000014556	POC1B	98	59.302	Heterocephalus_glaber_female
ENSXETG00000021865	poc1b	94	64.865	ENSHGLG00100000295	POC1B	98	56.621	Heterocephalus_glaber_male
ENSXETG00000021865	poc1b	95	64.067	ENSSTOG00000006306	POC1B	98	58.333	Ictidomys_tridecemlineatus
ENSXETG00000021865	poc1b	91	65.797	ENSJJAG00000013503	Poc1b	98	57.203	Jaculus_jaculus
ENSXETG00000021865	poc1b	99	66.048	ENSLOCG00000016379	POC1B	97	60.752	Lepisosteus_oculatus
ENSXETG00000021865	poc1b	95	66.295	ENSLAFG00000017550	POC1B	98	59.957	Loxodonta_africana
ENSXETG00000021865	poc1b	96	64.286	ENSMFAG00000043490	POC1B	98	58.686	Macaca_fascicularis
ENSXETG00000021865	poc1b	96	64.286	ENSMNEG00000040128	POC1B	98	58.686	Macaca_nemestrina
ENSXETG00000021865	poc1b	96	64.286	ENSMLEG00000031700	POC1B	98	58.686	Mandrillus_leucophaeus
ENSXETG00000021865	poc1b	96	62.912	ENSMOCG00000015822	Poc1b	98	57.537	Microtus_ochrogaster
ENSXETG00000021865	poc1b	96	64.835	ENSMODG00000009882	POC1B	99	56.040	Monodelphis_domestica
ENSXETG00000021865	poc1b	93	62.422	MGP_PahariEiJ_G0031323	Poc1b	98	55.452	Mus_pahari
ENSXETG00000021865	poc1b	96	65.659	ENSMPUG00000007581	POC1B	98	59.408	Mustela_putorius_furo
ENSXETG00000021865	poc1b	94	62.651	ENSMLUG00000002893	POC1B	98	56.818	Myotis_lucifugus
ENSXETG00000021865	poc1b	96	61.264	ENSNGAG00000019321	Poc1b	98	55.603	Nannospalax_galili
ENSXETG00000021865	poc1b	96	64.560	ENSNLEG00000034847	POC1B	98	59.110	Nomascus_leucogenys
ENSXETG00000021865	poc1b	95	65.460	ENSODEG00000009236	POC1B	99	58.672	Octodon_degus
ENSXETG00000021865	poc1b	97	65.373	ENSOANG00000006637	POC1B	98	60.422	Ornithorhynchus_anatinus
ENSXETG00000021865	poc1b	96	64.835	ENSOCUG00000008219	POC1B	98	58.774	Oryctolagus_cuniculus
ENSXETG00000021865	poc1b	96	63.187	ENSOARG00000015648	POC1B	98	58.051	Ovis_aries
ENSXETG00000021865	poc1b	96	64.011	ENSPPAG00000030897	POC1B	98	58.475	Pan_paniscus
ENSXETG00000021865	poc1b	96	64.835	ENSPPRG00000006168	POC1B	98	58.811	Panthera_pardus
ENSXETG00000021865	poc1b	94	64.596	ENSPTIG00000019536	POC1B	98	58.042	Panthera_tigris_altaica
ENSXETG00000021865	poc1b	96	64.011	ENSPTRG00000005284	POC1B	98	58.475	Pan_troglodytes
ENSXETG00000021865	poc1b	96	64.011	ENSPANG00000015875	POC1B	98	58.475	Papio_anubis
ENSXETG00000021865	poc1b	96	67.123	ENSPSIG00000004298	POC1B	99	60.600	Pelodiscus_sinensis
ENSXETG00000021865	poc1b	74	73.171	ENSPCIG00000014731	-	92	73.171	Phascolarctos_cinereus
ENSXETG00000021865	poc1b	96	64.011	ENSPPYG00000004819	POC1B	98	58.475	Pongo_abelii
ENSXETG00000021865	poc1b	98	45.877	ENSPCAG00000002158	POC1B	98	45.168	Procavia_capensis
ENSXETG00000021865	poc1b	96	65.659	ENSPVAG00000011562	POC1B	98	60.085	Pteropus_vampyrus
ENSXETG00000021865	poc1b	96	64.110	ENSPNAG00000026557	POC1B	96	58.017	Pygocentrus_nattereri
ENSXETG00000021865	poc1b	98	57.576	ENSRBIG00000001080	POC1B	98	57.576	Rhinopithecus_bieti
ENSXETG00000021865	poc1b	96	64.011	ENSRROG00000044376	POC1B	98	58.174	Rhinopithecus_roxellana
ENSXETG00000021865	poc1b	96	64.560	ENSSBOG00000023395	POC1B	98	59.110	Saimiri_boliviensis_boliviensis
ENSXETG00000021865	poc1b	91	61.047	ENSSARG00000010807	POC1B	98	53.178	Sorex_araneus
ENSXETG00000021865	poc1b	96	65.110	ENSSSCG00000000920	POC1B	98	59.197	Sus_scrofa
ENSXETG00000021865	poc1b	94	57.103	ENSTGUG00000008063	POC1B	98	50.638	Taeniopygia_guttata
ENSXETG00000021865	poc1b	93	58.485	ENSTBEG00000014216	POC1B	100	53.531	Tupaia_belangeri
ENSXETG00000021865	poc1b	96	65.110	ENSTTRG00000002513	POC1B	98	59.534	Tursiops_truncatus
ENSXETG00000021865	poc1b	96	65.659	ENSUAMG00000006889	POC1B	98	58.985	Ursus_americanus
ENSXETG00000021865	poc1b	94	64.907	ENSUMAG00000002434	POC1B	98	57.773	Ursus_maritimus
ENSXETG00000021865	poc1b	82	84.615	ENSVPAG00000001441	POC1B	81	84.615	Vicugna_pacos
ENSXETG00000021865	poc1b	88	63.500	ENSVVUG00000011627	-	96	63.500	Vulpes_vulpes